mRNA_H-elongata_contig113675.1092.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: D7FL06_ECTSI (TLDc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL06_ECTSI) HSP 1 Score: 176 bits (445), Expect = 1.890e-49 Identity = 81/95 (85.26%), Postives = 87/95 (91.58%), Query Frame = 1
Query: 1 QESHDYYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWIFSDRNP 285
+ES YYGTGESFV+SFHP+FK H WTGANDYF IS++SWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVW FS+ P
Sbjct: 673 KESQKYYGTGESFVYSFHPSFKGHRWTGANDYFCISSDSWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWFFSNLKP 767
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: W7U6I5_9STRA (Oxidation resistance protein 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6I5_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.880e-35 Identity = 60/92 (65.22%), Postives = 70/92 (76.09%), Query Frame = 1
Query: 1 QESHDYYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWIFSD 276
Q + YYGTGESFVF FHP F ++ WTG NDYF++SN LAMGGGGG FAFQ+DDELD G S PSDT+G+ RLSS F+CL +EVW F D
Sbjct: 189 QNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGFGD 279
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: A0A4D9DA04_9STRA (TLDc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA04_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.890e-33 Identity = 60/92 (65.22%), Postives = 70/92 (76.09%), Query Frame = 1
Query: 1 QESHDYYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWIFSD 276
Q + YYGTGESFVF FHP F ++ WTG NDYF++SN LAMGGGGG FAFQ+DDELD G S PSDT+G+ RLSS F+CL +EVW F D
Sbjct: 456 QNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGFGD 546
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: A0A482RX24_9ARCH (TLDc domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX24_9ARCH) HSP 1 Score: 120 bits (301), Expect = 7.340e-30 Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 1
Query: 1 QESHDYYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWI 267
Q+ YYG+GESFVFS PT + + WT N++FV+S+ LAMGGGG GFA QIDDELD G SN SDT+ +P LSSNEFF+CL VEVW+
Sbjct: 465 QDKKSYYGSGESFVFSVIPTIQAYKWTQKNNFFVLSHTEGLAMGGGGEGFAIQIDDELDTGVSNHSDTYDNPTLSSNEFFKCLNVEVWV 553
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: A0A7S3LZX6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZX6_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.190e-29 Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 1 QESHDYYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWIFS 273
Q YYG GESFVFS PT +VH WTG N+ FV+SN AMGGGG G+A Q+DDELD G SN SDTF + LSS+EFF+CL VEVW+ +
Sbjct: 262 QNKQGYYGNGESFVFSVVPTPRVHKWTGKNELFVLSNPHCFAMGGGGEGYAIQLDDELDTGVSNKSDTFNNNVLSSSEFFKCLNVEVWMLN 352
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: A0A5B7JVI5_PORTR (TLD domain-containing protein 2 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7JVI5_PORTR) HSP 1 Score: 88.2 bits (217), Expect = 1.880e-20 Identity = 42/85 (49.41%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 16 YYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWIF 270
YYGTGESF+FSF P F+V SWTG N +FV N L +GGG G F +D +L G + P TF +P+L+ +E F VE W F
Sbjct: 43 YYGTGESFLFSFQPEFQVFSWTGENTFFVKGNNESLIVGGGDGNFGLWLDGDLYQGRTQPCKTFNNPQLTDSEDFIIKAVECWCF 127
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: UPI000854A45B (LOW QUALITY PROTEIN: nuclear receptor coactivator 7 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854A45B) HSP 1 Score: 89.7 bits (221), Expect = 4.330e-20 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 16 YYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWIF 270
YYGTGE+F+F+F P FK W+G N YF+ + + LA+GGGGGGF +D +L G SNP TF + LS E F +EVW F
Sbjct: 137 YYGTGETFLFTFSPDFKAFKWSGDNSYFINGDIASLALGGGGGGFGLWLDSDLYHGRSNPCSTFNNNVLSKKEDFIVQDIEVWTF 221
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: UPI0018A74086 (TLD domain-containing protein 2-like n=2 Tax=Penaeus TaxID=133894 RepID=UPI0018A74086) HSP 1 Score: 87.4 bits (215), Expect = 2.150e-19 Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 16 YYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWIF 270
+YGTGESF+FSFHP F V WTG N++FV N L +GGG G F +D +L G + P TF +P+L+ E F VE W F
Sbjct: 115 FYGTGESFLFSFHPEFHVFPWTGENNFFVKGNNESLVVGGGDGNFGLWLDGDLYQGRTQPCKTFDNPQLTDTEDFIIKTVECWCF 199
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: A0A0P4WCB2_SCYOL (TLDc domain-containing protein n=2 Tax=Pleocyemata TaxID=6692 RepID=A0A0P4WCB2_SCYOL) HSP 1 Score: 87.0 bits (214), Expect = 2.600e-19 Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 16 YYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWIF 270
YYGTGESF+F+F P F+V SWTG N +FV N L +GGG G F +D +L G + P TF +P+L+ +E F VE W F
Sbjct: 108 YYGTGESFLFTFQPEFQVFSWTGENTFFVKGNNESLIVGGGDGNFGLWLDGDLYQGRTQPCKTFNNPQLTDSEDFIIKAVECWCF 192
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Match: A0A0L0T6E0_ALLM3 (TLDc domain-containing protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T6E0_ALLM3) HSP 1 Score: 88.6 bits (218), Expect = 3.490e-19 Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 16 YYGTGESFVFSFHPT---FKVHSWTGANDYFVISNESWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVW 264
+YGTGESFVF F T K + WTG ND+F++ S+ A+G G G FA +D L+ G+SNP++TF +P L+S+ F CL EVW
Sbjct: 194 FYGTGESFVFEFDHTSKELKAYHWTGLNDFFLLGEPSYFAVGAGDGKFAIYLDSNLEHGKSNPTETFDNPVLASDTTFFCLDCEVW 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113675.1092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig113675.1092.1 >prot_H-elongata_contig113675.1092.1 ID=prot_H-elongata_contig113675.1092.1|Name=mRNA_H-elongata_contig113675.1092.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp QESHDYYGTGESFVFSFHPTFKVHSWTGANDYFVISNESWLAMGGGGGGFback to top mRNA from alignment at H-elongata_contig113675:1291..1983- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig113675.1092.1 ID=mRNA_H-elongata_contig113675.1092.1|Name=mRNA_H-elongata_contig113675.1092.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=693bp|location=Sequence derived from alignment at H-elongata_contig113675:1291..1983- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig113675:1291..1983- >mRNA_H-elongata_contig113675.1092.1 ID=mRNA_H-elongata_contig113675.1092.1|Name=mRNA_H-elongata_contig113675.1092.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=576bp|location=Sequence derived from alignment at H-elongata_contig113675:1291..1983- (Himanthalia elongata Himel1 dioecious)back to top |