prot_H-elongata_contig113341.1076.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig113341.1076.1
Unique Nameprot_H-elongata_contig113341.1076.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length160
Homology
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BLAST of mRNA_H-elongata_contig113341.1076.1 vs. uniprot
Match: D7G3H6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H6_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 1.790e-67
Identity = 112/150 (74.67%), Postives = 131/150 (87.33%), Query Frame = 0 
Query:    2 VQAISHVLRLREPEERFTLLNYTVSTLPSMYVRGFKKTATNIVDYYRAQGDACHDQELRSMVLELGEALDVIMPEDRVRYLCKEVDEWAAKKAEEDSMELRRLREYEAEDLEMRRKTASGLWNRNMHPDARMDTEEKAEMKKLTDAIRAQ 151
            V+ ISHVLR++EPEER  LLN T+STLPSMY+RGFK+TATNIVDYY A GD C DQ+LRSMVLE+GE L V+M E+R+  L KE+D+WAAKKAEEDS ELRRLREYEAEDLE+RR TASGLWN+ MHPDA MDTEEKAE++KLTDA++ Q
Sbjct:  469 VELISHVLRMKEPEERLALLNITISTLPSMYIRGFKRTATNIVDYYEAMGDNCMDQDLRSMVLEIGENLKVLMSEERMAVLTKEIDDWAAKKAEEDSTELRRLREYEAEDLELRRATASGLWNKQMHPDATMDTEEKAEIRKLTDALKGQ 618
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BLAST of mRNA_H-elongata_contig113341.1076.1 vs. uniprot
Match: A0A6H5KR11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR11_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 5.110e-65
Identity = 112/152 (73.68%), Postives = 131/152 (86.18%), Query Frame = 0 
Query:    2 VQAISHVLRLREPEERFTLLNYTVSTLPSMYVRGFKKTATNIVDYYRAQGDACHDQELRSMVLELGEALDVIMPEDRVRYLCKEVDEWAAKKAEEDSME--LRRLREYEAEDLEMRRKTASGLWNRNMHPDARMDTEEKAEMKKLTDAIRAQ 151
            V+ ISHVLR++EPEER  LLN T+STLPSMY+RGFK+TATNIVDYY A GD C DQ+LRSMVLE+GE L V+M E+R+  L KE+D+WAAKKAEEDS E  LRRLREYEAEDLE+RR TASGLWN+ MHPDA MDTEEKAE++KLTDA++ Q
Sbjct:  732 VELISHVLRMKEPEERLALLNITISTLPSMYIRGFKRTATNIVDYYEAMGDNCMDQDLRSMVLEIGENLKVLMSEERMAVLTKEIDDWAAKKAEEDSTESKLRRLREYEAEDLELRRATASGLWNKQMHPDATMDTEEKAEIRKLTDALKGQ 883
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113341.1076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3H6_ECTSI1.790e-6774.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR11_9PHAE5.110e-6573.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig113341contigH-elongata_contig113341:122..1785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig113341.1076.1mRNA_H-elongata_contig113341.1076.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig113341 122..1785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig113341.1076.1 ID=prot_H-elongata_contig113341.1076.1|Name=mRNA_H-elongata_contig113341.1076.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp
MVQAISHVLRLREPEERFTLLNYTVSTLPSMYVRGFKKTATNIVDYYRAQ
GDACHDQELRSMVLELGEALDVIMPEDRVRYLCKEVDEWAAKKAEEDSME
LRRLREYEAEDLEMRRKTASGLWNRNMHPDARMDTEEKAEMKKLTDAIRA
QVMNYPLFI*
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