mRNA_H-elongata_contig113224.1071.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: A0A836CNH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH7_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.030e-42 Identity = 102/182 (56.04%), Postives = 119/182 (65.38%), Query Frame = 1
Query: 31 EEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQEAKKFKFVLDFKIKDLKRQIEPRETEIANMKQHIKEMDRELEQ 576
+EFE+KL D QLR QL E+ L RE ET Q+E+DIDTEI LR RFE+QL++EREATLRYKGENGIM+KKF+VLTKDI+DQKEE+R LH +EK NQE +KFKFVLD+KIK+LKRQIEPRETEIA MK+ IK MD ELEQ
Sbjct: 949 QEFEKKLERDMQLRQQLEAEEAGLRRECAETRDQLEEDIDTEISRLRGRFEAQLSSEREATLRYKGENGIMRKKFSVLTKDIEDQKEEMRVLHAREKELQAQIKGLEREIAAHKREGRDDTIGEKEKRIYELKKK--NQELEKFKFVLDYKIKELKRQIEPRETEIAAMKEQIKGMDGELEQ 1128
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: A0A0P1AHD8_PLAHL (WD40/YVTN repeat-like-containing domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHD8_PLAHL) HSP 1 Score: 132 bits (333), Expect = 2.150e-32 Identity = 78/163 (47.85%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 13 YITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQEAKKFKFVLDFKIKDLKR 501
Y+ E+TE+FE++L EDRQLR Q+ EEK +LDRE+ ET QVE D+D EI+ L+ ++E +L AEREATLR KGENGIMKKKF L KDI+DQ+++I+ L E EK NQE +KFKFVLD+KIK+LK+
Sbjct: 926 YVAEVTEDFEKRLNEDRQLRTQIEEEKRDLDREYYETVAQVEADVDEEIEALKKKYEDKLQAEREATLRLKGENGIMKKKFLALQKDIEDQRDQIKVLLETEKELIEAMKSFEKEIYALKREIRVRDDTIGEKERRIYDLKKKNQELEKFKFVLDYKIKELKK 1088
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: A0A8K1FFZ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFZ7_PYTOL) HSP 1 Score: 132 bits (332), Expect = 3.080e-32 Identity = 98/160 (61.25%), Postives = 122/160 (76.25%), Query Frame = 1
Query: 1 TGGRYITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQEAKKFKFVLDF 480
T +Y+T++TE+FEQ+L EDRQLRLQ+ +EK EL RE+ ET QVE D+D EI+NL+ R+E +L AEREATLR+KGENGIMKKKF+ L KDI+DQ+++I++L EKE XXXXXXXXXXXXXXXXXXXXX NQE +KFKFVLD+
Sbjct: 2145 THEKYVTDVTEDFEQRLNEDRQLRLQMEDEKEELGREYTETITQVEADVDEEIENLKKRYEEKLQAEREATLRFKGENGIMKKKFSALQKDIEDQRDQIKSLLEKEXXXXXXXXXXXXXXXXXXXXXXXRDETIGEKEKRIYDLKRKNQELEKFKFVLDY 2304
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: A0A6A3SQT7_9STRA (Cilia-and flagella-associated protein 57 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SQT7_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.480e-30 Identity = 110/161 (68.32%), Postives = 134/161 (83.23%), Query Frame = 1
Query: 1 TGGRYITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQEAKKFKFVLDFK 483
T +Y+ ++TE+FEQ+L EDRQLR+Q+ EEK EL RE+ ET QVE D+D EI+ L+ ++E +L AEREATLR+KGENGIMKKKF+ L KDI+DQ+++I+ L EKEK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX Q +KFKFVLD+K
Sbjct: 140 THDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIETLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQKDIEDQRDQIKLLLEKEKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDXXXXXQXLEKFKFVLDYK 300
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: A0A2D4C3P4_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3P4_PYTIN) HSP 1 Score: 127 bits (318), Expect = 2.210e-30 Identity = 113/161 (70.19%), Postives = 136/161 (84.47%), Query Frame = 1
Query: 1 TGGRYITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQEAKKFKFVLDFK 483
T RY+ E+TE+FEQ+L EDRQLR+Q+ +E EL RE+ ET QVE D+D EI+ L+ R+E +L AEREATLR+KG NGIMKKKF+ L KDI+DQ+++I++L EKE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQE +KFKFVLD+K
Sbjct: 892 THERYVCEVTEDFEQRLNEDRQLRVQMEDENEELHREYAETVRQVEADVDEEIETLKKRYEDKLHAEREATLRFKGXNGIMKKKFSALQKDIEDQRDQIKSLLEKEXDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQELEKFKFVLDYK 1052
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: A0A6G0QJM9_9STRA (Cilia-and flagella-associated protein 57 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0QJM9_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.790e-30 Identity = 110/161 (68.32%), Postives = 134/161 (83.23%), Query Frame = 1
Query: 1 TGGRYITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQEAKKFKFVLDFK 483
T +Y+ ++TE+FEQ+L EDRQLR+Q+ EEK EL RE+ ET QVE D+D EI+ L+ ++E +L AEREATLR+KGENGIMKKKF+ L KDI+DQ+++I+ L EKEK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX Q +KFKFVLD+K
Sbjct: 396 THDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIETLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQKDIEDQRDQIKLLLEKEKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDXXXXXQXLEKFKFVLDYK 556
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: A0A6A3I5X4_9STRA (Cilia-and flagella-associated protein 57 n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3I5X4_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.960e-30 Identity = 111/161 (68.94%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 1 TGGRYITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQEAKKFKFVLDFK 483
T +Y+ ++TE+FEQ+L EDRQLR+Q+ EEK EL RE+ ET QVE D+D EI+ L+ ++E +L AEREATLR+KGENGIMKKKF+ L KDI+DQ+++I+ L EKEK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX Q +KFKFVLD+K
Sbjct: 700 THDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIETLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQKDIEDQRDQIKLLLEKEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDXXXXXQXLEKFKFVLDYK 860
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: G5AB45_PHYSP (Uncharacterized protein n=23 Tax=Phytophthora TaxID=4783 RepID=G5AB45_PHYSP) HSP 1 Score: 125 bits (315), Expect = 5.570e-30 Identity = 111/161 (68.94%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 1 TGGRYITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQEAKKFKFVLDFK 483
T +Y+ ++TE+FEQ+L EDRQLR+Q+ EEK EL RE+ ET QVE D+D EI+ L+ ++E +L AEREATLR+KGENGIMKKKF+ L KDI+DQ+++I+ L EKEK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX Q +KFKFVLD+K
Sbjct: 865 THDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIEALKTKYEDKLQAEREATLRFKGENGIMKKKFSALQKDIEDQRDQIKLLLEKEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDXXXXXQXLEKFKFVLDYK 1025
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: H3GPP5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GPP5_PHYRM) HSP 1 Score: 124 bits (311), Expect = 1.920e-29 Identity = 65/107 (60.75%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 1 TGGRYITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEK 321
T +Y+ ++TE+FEQ+L EDRQLR+Q+ EEK EL RE+ ET QVE D+D EI+ L+ ++E +L AEREATLR+KGENGIMKKKF+ L KDI+DQ+++I+ L EKEK
Sbjct: 916 THDKYVADVTEDFEQRLNEDRQLRMQMEEEKEELGREYRETVSQVEADVDEEIEALKKKYEDKLQAEREATLRFKGENGIMKKKFSALQKDIEDQRDQIKLLLEKEK 1022
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Match: A0A3F2RUX9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RUX9_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.610e-29 Identity = 65/107 (60.75%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 1 TGGRYITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDTEIDNLRNRFESQLTAEREATLRYKGENGIMKKKFTVLTKDIDDQKEEIRALHEKEK 321
T +Y+ ++TE+FEQ+L EDRQLR+Q+ EEK EL RE+ ET QVE D+D EI+ L+ ++E +L AEREATLR+KGENGIMKKKF+ L KDI+DQ+++I+ L EKEK
Sbjct: 1117 THDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIEVLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQKDIEDQRDQIKLLLEKEK 1223 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113224.1071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig113224.1071.1 >prot_H-elongata_contig113224.1071.1 ID=prot_H-elongata_contig113224.1071.1|Name=mRNA_H-elongata_contig113224.1071.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp TGGRYITELTEEFEQKLGEDRQLRLQLREEKTELDREFMETEHQVEDDIDback to top mRNA from alignment at H-elongata_contig113224:413..1666- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig113224.1071.1 ID=mRNA_H-elongata_contig113224.1071.1|Name=mRNA_H-elongata_contig113224.1071.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1254bp|location=Sequence derived from alignment at H-elongata_contig113224:413..1666- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig113224:413..1666- >mRNA_H-elongata_contig113224.1071.1 ID=mRNA_H-elongata_contig113224.1071.1|Name=mRNA_H-elongata_contig113224.1071.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig113224:413..1666- (Himanthalia elongata Himel1 dioecious)back to top |