prot_H-elongata_contig113070.1060.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig113070.1060.1
Unique Nameprot_H-elongata_contig113070.1060.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5KTI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI8_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 2.020e-26
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAEYVA 108
            MW+S   RPDI+  ++A ARH+H P  RHWKA+++I AY+  T+ +G+ + RGSGL L+V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EAEY+A
Sbjct:   89 MWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIA 196
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5L589_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L589_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.410e-25
Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAEYVA 108
            MW+S   RPDI   ++A ARH+H P  RHWKA+++I AY+  T+ +G+ + RGSGL L V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EAEY+A
Sbjct:  170 MWVSTFTRPDICFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYKRGSGLGLEVYVDASYADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIA 277
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 7.950e-25
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAEYVA 108
            MW+S   RPDI+  ++A ARH+H P  RHWKA+++I AY+  T+ +G+ + RGSGL L+V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EAEY+A
Sbjct:  298 MWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIA 405
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5KGX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGX6_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 8.860e-25
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAEYVA 108
            MW+S   RPDI+  ++A ARH+H P  RHWKA+++I AY+  T+ +G+ + RGSGL L+V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EAEY+A
Sbjct:  385 MWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIA 492
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5L715_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L715_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.030e-24
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAEYVA 108
            MW+S   RPDI+  ++A ARH+H P  RHWKA+++I AY+  T+ +G+ + RGSGL L+V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EAEY+A
Sbjct: 1364 MWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIA 1471
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5JNN1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN1_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.030e-24
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAEYVA 108
            MW+S   RPDI+  ++A ARH+H P  RHWKA+++I AY+  T+ +G+ + RGSGL L+V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EAEY+A
Sbjct: 1462 MWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIA 1569
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5K4H5_9PHAE (CCHC-type domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H5_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.380e-24
Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAEYVA 108
            MW+S   RPDI+  ++A ARH+H P  RHWKA+++I AY+  T+ +G+ + RGSGL L V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EAEY+A
Sbjct:  984 MWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYKRGSGLGLEVYVDASYADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIA 1091
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.410e-24
Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAEYVA 108
            MW+S   RPDI+  ++A ARH+H P  RHWKA+++I AY+  T+ +G+ + RGSGL L V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EAEY+A
Sbjct: 1687 MWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLEVYVDASYADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIA 1794
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5KWI5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI5_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 4.320e-24
Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAE 105
            MW+S   RPDI+  ++A ARH+H P  RHWKA+++I AY+  T+ +G+ + RGSGL L+V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EA+
Sbjct:  131 MWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAD 235
[Close]
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Match: A0A6H5JSU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU1_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 4.710e-24
Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = 0 
Query:    1 MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRFVRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTATCEAEYVA 108
            MW+S   RPDI+  ++A ARH+H P  RHWKA+++I AY+   + +G+ + RGSGL L V+ DA YA     RSVSG+A  +G T IS  S TQ  V+ ++ EAEY+A
Sbjct:  630 MWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKEKRDLGITYKRGSGLGLEVYVDASYAGAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIA 737
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113070.1060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTI8_9PHAE2.020e-2649.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L589_9PHAE4.410e-2549.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG0_9PHAE7.950e-2549.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGX6_9PHAE8.860e-2549.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L715_9PHAE1.030e-2449.07CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JNN1_9PHAE1.030e-2449.07CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K4H5_9PHAE1.380e-2449.07CCHC-type domain-containing protein n=11 Tax=Ectoc... [more]
A0A6H5LGF7_9PHAE1.410e-2449.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWI5_9PHAE4.320e-2447.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JSU1_9PHAE4.710e-2448.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..108
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 7..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig113070contigH-elongata_contig113070:97..589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig113070.1060.1mRNA_H-elongata_contig113070.1060.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig113070 97..610 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig113070.1060.1 ID=prot_H-elongata_contig113070.1060.1|Name=mRNA_H-elongata_contig113070.1060.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
MWMSVMMRPDIANDLQACARHSHNPTARHWKALLRIAAYVNATKKIGLRF
VRGSGLRLSVFADADYAAVRVWRSVSGVAVLLGDTAISWKSSTQKCVTTA
TCEAEYVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like