prot_H-elongata_contig11304.1059.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11304.1059.1
Unique Nameprot_H-elongata_contig11304.1059.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: D7G5R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R8_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 2.620e-10
Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MLGLIISRPKLSDKLLKMPPFRFLHDIVSEVTRQVGARQ 39
            ML  IISRP+LSDKLL MPPFRFLHDIVSEVTRQ G  Q
Sbjct:  285 MLEPIISRPRLSDKLLNMPPFRFLHDIVSEVTRQTGFGQ 323          
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: A0A8J5XXU0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XXU0_DIALT)

HSP 1 Score: 57.4 bits (137), Expect = 2.890e-8
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MLGLIISRPKLSDKLLKMPPFRFLHDIVSEVTRQVG 36
            +LG II RPKL+D LLK PPFRFLHDIVSEVT+  G
Sbjct:   17 LLGAIIKRPKLTDALLKKPPFRFLHDIVSEVTKVTG 52          
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: A0A7S2CW62_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CW62_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.970e-8
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MLGLIISRPKLSDKLLKMPPFRFLHDIVSEVTRQVG 36
            +LG ++ +PKLSDKLL  PPFRFLHD++SEVTR  G
Sbjct:  119 LLGEVVKKPKLSDKLLSKPPFRFLHDVISEVTRATG 154          
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: A0A7S3BKU3_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BKU3_9VIRI)

HSP 1 Score: 54.7 bits (130), Expect = 4.940e-8
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 0
Query:    5 IISRPKLSDKLLKMPPFRFLHDIVSEVTRQVG 36
            IISRPKL+  LLK PPFRFLHDIVSEVTR  G
Sbjct:   32 IISRPKLTGDLLKRPPFRFLHDIVSEVTRNTG 63          
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: A0A7S4NCB2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NCB2_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 6.600e-8
Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    2 LGLIISRPKLSDKLLKMPPFRFLHDIVSEVTRQVG 36
            LG +I RPKLSD LL  PPFRFLHDIVSEVT+  G
Sbjct:   36 LGTLIKRPKLSDALLLKPPFRFLHDIVSEVTKATG 70          
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: A0A7S3C572_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C572_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 1.890e-7
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    2 LGLIISRPKLSDKLLKMPPFRFLHDIVSEVTRQVG 36
            LG +I RPKL+D LL+ PPFRFLHDIVSEVT+  G
Sbjct:   26 LGTLIKRPKLTDPLLQKPPFRFLHDIVSEVTKATG 60          
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: A0A812ICK4_9DINO (Traf3ip1 protein n=7 Tax=Symbiodinium TaxID=2949 RepID=A0A812ICK4_9DINO)

HSP 1 Score: 55.1 bits (131), Expect = 1.900e-7
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    2 LGLIISRPKLSDKLLKMPPFRFLHDIVSEVTRQVGARQ 39
            +G +IS+PK++DK LK PPFRFLHD+V EVTR  G  Q
Sbjct:   13 IGTLISKPKMADKYLKKPPFRFLHDLVMEVTRTTGFAQ 50          
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: A0A835YT93_9STRA (Microtubule-binding protein MIP-T3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT93_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.900e-7
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MLGLIISRPKLSDKLLKMPPFRFLHDIVSEVTRQVG 36
            M+  +ISRPK+S+KLL  PPFRFLHDI+SEVTR  G
Sbjct:  267 MMERLISRPKMSEKLLSKPPFRFLHDIISEVTRVTG 302          
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: A0A7S2QKA6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QKA6_9DINO)

HSP 1 Score: 54.7 bits (130), Expect = 2.450e-7
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    2 LGLIISRPKLSDKLLKMPPFRFLHDIVSEVTRQVG-ARQVGSAHEDDGSHLS 52
            LG +IS+PK++DK LK PPFRFLHDIV EVTR    A+ + S  E D + L+
Sbjct:   32 LGKLISKPKMTDKYLKKPPFRFLHDIVMEVTRATQFAQGLYSPEESDAAQLA 83          
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Match: A0A812S3E9_SYMMI (Traf3ip1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S3E9_SYMMI)

HSP 1 Score: 54.7 bits (130), Expect = 2.590e-7
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 MLGLIISRPKLSDKLLKMPPFRFLHDIVSEVTR 33
            MLG IIS+PKLSDKLL  PPFRFLHDIV+EV +
Sbjct:   71 MLGAIISKPKLSDKLLGKPPFRFLHDIVTEVIK 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11304.1059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5R8_ECTSI2.620e-1082.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J5XXU0_DIALT2.890e-875.00Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2CW62_9STRA3.970e-866.67Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3BKU3_9VIRI4.940e-881.25Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A7S4NCB2_9EUKA6.600e-874.29Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A7S3C572_9EUKA1.890e-771.43Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A812ICK4_9DINO1.900e-763.16Traf3ip1 protein n=7 Tax=Symbiodinium TaxID=2949 R... [more]
A0A835YT93_9STRA1.900e-769.44Microtubule-binding protein MIP-T3-domain-containi... [more]
A0A7S2QKA6_9DINO2.450e-755.77Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A812S3E9_SYMMI2.590e-778.79Traf3ip1 protein n=1 Tax=Symbiodinium microadriati... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040468TRAF3-interacting protein 1, N-terminalPFAMPF10243MIP-T3coord: 2..39
e-value: 1.1E-12
score: 47.9
IPR042576TRAF3-interacting protein 1, N-terminal domain superfamilyGENE3D1.10.418.50coord: 1..51
e-value: 7.3E-13
score: 50.3
IPR018799TRAF3-interacting protein 1PANTHERPTHR31363FAMILY NOT NAMEDcoord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11304contigH-elongata_contig11304:8394..8549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11304.1059.1mRNA_H-elongata_contig11304.1059.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11304 8394..8561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11304.1059.1 ID=prot_H-elongata_contig11304.1059.1|Name=mRNA_H-elongata_contig11304.1059.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
MLGLIISRPKLSDKLLKMPPFRFLHDIVSEVTRQVGARQVGSAHEDDGSH
LS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040468TRAF3IP1_N
IPR042576TRAF3IP1_N_sf
IPR018799TRAF3IP1