prot_H-elongata_contig113030.1058.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig113030.1058.1
Unique Nameprot_H-elongata_contig113030.1058.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
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BLAST of mRNA_H-elongata_contig113030.1058.1 vs. uniprot
Match: A0A6H5KJU4_9PHAE (MULE domain-containing protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU4_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 6.200e-34
Identity = 65/102 (63.73%), Postives = 73/102 (71.57%), Query Frame = 0 
Query:    1 AKVFEEQRKKSKELHISPTGNGVFNVTKDATTYGNRVELRFGIDSAETEVTCTCMMIVRWKIPCCDIIAVGRALSKADEVMALIDKAYHLETYRGLYEDNRF 102
            AK FE QR KS  LH S TGNG F V K  + YGNRV L FG D   T +TCTC    R+KIPCCDIIAVGRAL K+DEVM+ ID AYHL+TYR LY ++RF
Sbjct:  209 AKEFEAQRAKSSNLHSSATGNGNFTVRKLGSNYGNRVGLEFGTDGVVTRMTCTCGYTTRFKIPCCDIIAVGRALDKSDEVMSSIDPAYHLDTYRALYAESRF 310
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BLAST of mRNA_H-elongata_contig113030.1058.1 vs. uniprot
Match: A0A6H5KEB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB7_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 3.690e-32
Identity = 63/102 (61.76%), Postives = 71/102 (69.61%), Query Frame = 0 
Query:    1 AKVFEEQRKKSKELHISPTGNGVFNVTKDATTYGNRVELRFGIDSAETEVTCTCMMIVRWKIPCCDIIAVGRALSKADEVMALIDKAYHLETYRGLYEDNRF 102
            AK FE QR KS  LH S TGNG F V K  + YGNRV L FG D   T +TCTC     +KIPC DI+AVGRAL K+DEVM+ ID AYHL+TYR LY D+RF
Sbjct:  131 AKEFEAQRAKSGNLHSSATGNGNFTVRKLGSNYGNRVGLEFGTDGVVTRMTCTCGYTTGFKIPCSDIVAVGRALDKSDEVMSSIDPAYHLDTYRALYADSRF 232
[Close]
BLAST of mRNA_H-elongata_contig113030.1058.1 vs. uniprot
Match: A0A6H5K0L7_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L7_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 3.040e-30
Identity = 63/103 (61.17%), Postives = 72/103 (69.90%), Query Frame = 0 
Query:    1 AKVFEEQRKKSKELHISPTGNGVFNVTKDATTYGNRVELRFG-IDSAETEVTCTCMMIVRWKIPCCDIIAVGRALSKADEVMALIDKAYHLETYRGLYEDNRF 102
            AK +  QRKKS  LH S TGN  F V K  + YGNRV L FG  D   T ++CTC    R+KIPCCDIIAVGR L+K+DEVMA ID AYHL+TYR LY D+RF
Sbjct:  219 AKEYGAQRKKSSNLHSSATGNCNFTVRKRGSQYGNRVRLEFGGTDGGVTLMSCTCGFTTRFKIPCCDIIAVGRVLNKSDEVMASIDPAYHLDTYRALYGDSRF 321
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113030.1058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJU4_9PHAE6.200e-3463.73MULE domain-containing protein n=6 Tax=Ectocarpus ... [more]
A0A6H5KEB7_9PHAE3.690e-3261.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0L7_9PHAE3.040e-3061.17MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig113030contigH-elongata_contig113030:409..1388 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig113030.1058.1mRNA_H-elongata_contig113030.1058.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig113030 409..1388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig113030.1058.1 ID=prot_H-elongata_contig113030.1058.1|Name=mRNA_H-elongata_contig113030.1058.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
AKVFEEQRKKSKELHISPTGNGVFNVTKDATTYGNRVELRFGIDSAETEV
TCTCMMIVRWKIPCCDIIAVGRALSKADEVMALIDKAYHLETYRGLYEDN
RFR
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