prot_H-elongata_contig112823.1049.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112823.1049.1
Unique Nameprot_H-elongata_contig112823.1049.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length204
Homology
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BLAST of mRNA_H-elongata_contig112823.1049.1 vs. uniprot
Match: D7FJ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ42_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 3.040e-24
Identity = 98/203 (48.28%), Postives = 105/203 (51.72%), Query Frame = 0 
Query:    1 MAEKATKEVGIDGLQEEYGPFTEADIFRLAPTDDEREARKRDLVATREKARLAKKAKKTARRGKXXXXXXXXXXXXXXSPLKHGAAVLSSGNDDIDHIDGRKTSAGVHGKGAGEAAKSTGRKKRRIEKKETMVRMGAGVGGGASQRSVGPSGGQGSSGVARAAAEVVKKNKEDSKSYASLFGRKDVSNENLFIATAGHRYTLG 203
            M+EKATKEVGI GLQEEYGPFTE DI  LAPTD+ERE R R L+  REKARLAKK         XXXXXXXXXXXXXX                                                                      G S G  S+ +A AAAE VKKNKE SK YASLFG+KDVSNE+LFIATAGHRY LG
Sbjct:  144 MSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLITKREKARLAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN------------GASAGPNSARLAGAAAEAVKKNKEASKVYASLFGKKDVSNEHLFIATAGHRYNLG 334
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112823.1049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJ42_ECTSI3.040e-2448.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112823contigH-elongata_contig112823:1193..2101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112823.1049.1mRNA_H-elongata_contig112823.1049.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112823 1193..2128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112823.1049.1 ID=prot_H-elongata_contig112823.1049.1|Name=mRNA_H-elongata_contig112823.1049.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=204bp
MAEKATKEVGIDGLQEEYGPFTEADIFRLAPTDDEREARKRDLVATREKA
RLAKKAKKTARRGKAAASSPGGKASSSSSPLKHGAAVLSSGNDDIDHIDG
RKTSAGVHGKGAGEAAKSTGRKKRRIEKKETMVRMGAGVGGGASQRSVGP
SGGQGSSGVARAAAEVVKKNKEDSKSYASLFGRKDVSNENLFIATAGHRY
TLG*
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