prot_H-elongata_contig1127.1038.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1127.1038.1
Unique Nameprot_H-elongata_contig1127.1038.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length221
Homology
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BLAST of mRNA_H-elongata_contig1127.1038.1 vs. uniprot
Match: D8LDX8_ECTSI (Kinesin motor domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX8_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 2.030e-12
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 0 
Query:    2 STLGHCVSHIHNHIEKACRVQGPSGGTPERKRYPRPDKFSTTRPLGEIVSDFR 54
            S+LG CV HI +H+E+AC V+ PSGGTP +K YPRP+ FSTTRP  EI+S+ R
Sbjct:  931 SSLGQCVLHIEDHVEEACAVRDPSGGTPGKKSYPRPEAFSTTRPHEEIMSEIR 983
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1127.1038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDX8_ECTSI2.030e-1262.26Kinesin motor domain-containing protein (Fragment)... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1127contigH-elongata_contig1127:9610..11067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1127.1038.1mRNA_H-elongata_contig1127.1038.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1127 9170..11563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1127.1038.1 ID=prot_H-elongata_contig1127.1038.1|Name=mRNA_H-elongata_contig1127.1038.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=221bp
MSTLGHCVSHIHNHIEKACRVQGPSGGTPERKRYPRPDKFSTTRPLGEIV
SDFRNKGRAPLQSPRECRTAVPGDQGEASSSTASMELLGDLPDDAGARVE
VETSYVSIASLALESQFAGGDEVERKTGRFKDLSGNTSSVSSNPKEEGDA
STATMKADTGRGITKSSAAPAGERGVSHTGTRIPSPPLNEATNTSGSSQT
RANLKSRIPSRRSTRRTWAK*
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