prot_H-elongata_contig112650.1033.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112650.1033.1
Unique Nameprot_H-elongata_contig112650.1033.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: D7FXM7_ECTSI (Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM7_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 2.370e-43
Identity = 71/90 (78.89%), Postives = 81/90 (90.00%), Query Frame = 0
Query:    1 MLLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFAV 90
            +LLNSSAVAKMHMGE+QEAE+ LVEA+SK QND DTLVNLIC CRH+DKPASF+DRY+NQLK  HPQHPYV+SL NAE+AFDRVA  FA+
Sbjct:  205 LLLNSSAVAKMHMGEYQEAETILVEAISKSQNDADTLVNLICVCRHLDKPASFVDRYINQLKTAHPQHPYVQSLANAESAFDRVAATFAL 294          
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: A0A7S2XUN8_9STRA (Coatomer subunit epsilon n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUN8_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.460e-31
Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 0
Query:    2 LLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFAV 90
            LLN+ A AKMH G+ QEAE +LV+A SK QNDPDTLVN+ICC +H+ KP  FI+RYVNQLK   P+HPYVK++   E AFDRVA  +A+
Sbjct:  203 LLNALACAKMHAGQAQEAEQHLVQAASKNQNDPDTLVNMICCYQHLQKPEDFINRYVNQLKSVAPEHPYVKAMTTVEGAFDRVASTYAL 291          
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: A0A7S2RZ95_9STRA (Coatomer subunit epsilon n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ95_9STRA)

HSP 1 Score: 104 bits (259), Expect = 4.650e-25
Identity = 48/88 (54.55%), Postives = 63/88 (71.59%), Query Frame = 0
Query:    2 LLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFA 89
            LLN  AVA + MG+F EAE  L++A+SK QNDPDTL+NLICC +HM K +  ++R+++QLK   P HP+V  L   E AFDRV+  FA
Sbjct:  220 LLNGVAVAHIQMGKFDEAEKYLMDAISKGQNDPDTLINLICCYQHMGKSSDLVNRHISQLKTVAPNHPFVAQLATVEAAFDRVSAGFA 307          
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: A0A836CM75_9STRA (Coatomer subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM75_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.940e-24
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    1 MLLNSSAVAKMHMGEFQEAESNLVEALSKRQND-PDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFAV 90
            +LLN  AVAKMHMGE+ EAE+NL+EA  K      DTLVNL+ CCRH+DKP S   +Y+ QLK+ +P H Y  +L NAE+AF RV+ + AV
Sbjct:  207 LLLNGVAVAKMHMGEWGEAEANLLEAAGKPGGGGADTLVNLVTCCRHLDKPESQAQQYLEQLKEKYPNHAYTVTLRNAESAFSRVSDSLAV 297          
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: UPI00077AB92E (coatomer subunit epsilon-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AB92E)

HSP 1 Score: 94.0 bits (232), Expect = 2.080e-21
Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    1 MLLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFAV 90
            MLLN  AVA MHMG+F++AES L +AL K  ++P+TL+N+I   +H+ K      RY++QLK  HP HP  K     E AFD++AG +AV
Sbjct:  173 MLLNGQAVAYMHMGKFEDAESLLQDALDKDSSNPETLINMIVLSQHLGKAPEVTTRYISQLKDGHPNHPLTKEFQAKEKAFDQLAGQYAV 262          
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: A0A444ZE34_ARAHY (Uncharacterized protein n=2 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444ZE34_ARAHY)

HSP 1 Score: 90.5 bits (223), Expect = 6.090e-21
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    1 MLLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFA 89
            +LLN  AV  MHMG F EAE+ LVEAL+K   DP+TL NL+ CC H+ KP+S   +  +QLK +HP H  VK +  AE +FDR   +F+
Sbjct:   85 LLLNGKAVCCMHMGNFDEAETLLVEALNKDARDPETLANLVVCCLHLGKPSS---KSFSQLKLSHPDHVLVKRVTTAEESFDRALQSFS 170          
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: A0A3M6V574_POCDA (Coatomer subunit epsilon n=4 Tax=Scleractinia TaxID=6125 RepID=A0A3M6V574_POCDA)

HSP 1 Score: 93.2 bits (230), Expect = 7.000e-21
Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    1 MLLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFAV 90
            MLLN  A+A MHMG+F++AES L +AL K  ++P+TL+N++   +H+ K      RY++QLK  HP HP+ K LL  E  FD++A  +AV
Sbjct:  206 MLLNGQAIAYMHMGKFEDAESCLQDALDKDSSNPETLINMVVLSQHLGKAPEVTTRYISQLKDGHPSHPFTKDLLAKEKNFDQLAEQYAV 295          
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: UPI001036EEAC (coatomer subunit epsilon-1-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036EEAC)

HSP 1 Score: 87.4 bits (215), Expect = 2.140e-20
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    1 MLLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFA 89
            ++LN  AV  MHMG F +AES L+EAL+K   DP+TL NL+ C  H+ KP+S   R++NQ+K +HP H  VK   +AE +FDR     A
Sbjct:   26 LILNRKAVCCMHMGNFDQAESLLLEALNKDAKDPETLANLVVCSPHLGKPSS---RFLNQMKLSHPDHMLVKRASSAEESFDRAVQTIA 111          
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: A0A251TC83_HELAN (Coatomer subunit epsilon n=4 Tax=Asteraceae TaxID=4210 RepID=A0A251TC83_HELAN)

HSP 1 Score: 91.7 bits (226), Expect = 2.310e-20
Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    1 MLLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDR 83
            ++LN  AV  MHMG F EAES L+EAL+K   DP+TL NL+ CC H+ KP+S   R+++QLK  HP+H  VK  L AE +FDR
Sbjct:  205 LVLNGKAVCCMHMGNFDEAESFLLEALNKDAKDPETLANLVVCCLHLGKPSS---RFLSQLKLTHPEHMLVKRGLTAEESFDR 284          
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Match: A0A507C522_9FUNG (Coatomer subunit epsilon n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C522_9FUNG)

HSP 1 Score: 90.9 bits (224), Expect = 5.540e-20
Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    2 LLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKPASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFAV 90
            LLN  AV +MH G+F +AE+ L++AL++  NDP+ L NL+ C   + KP+  + RY+NQL+   P HP+V    + E  FDR AG FA+
Sbjct:  215 LLNGQAVCRMHAGKFADAETLLLDALNRNNNDPEVLANLMVCSVALGKPSDVVSRYLNQLRDASPNHPFVLEYASKEAMFDRAAGRFAI 303          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112650.1033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXM7_ECTSI2.370e-4378.89Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XUN8_9STRA1.460e-3162.92Coatomer subunit epsilon n=1 Tax=Fibrocapsa japoni... [more]
A0A7S2RZ95_9STRA4.650e-2554.55Coatomer subunit epsilon n=1 Tax=Rhizochromulina m... [more]
A0A836CM75_9STRA2.940e-2456.04Coatomer subunit epsilon n=1 Tax=Tribonema minus T... [more]
UPI00077AB92E2.080e-2148.89coatomer subunit epsilon-like n=1 Tax=Acropora dig... [more]
A0A444ZE34_ARAHY6.090e-2150.56Uncharacterized protein n=2 Tax=Arachis hypogaea T... [more]
A0A3M6V574_POCDA7.000e-2146.67Coatomer subunit epsilon n=4 Tax=Scleractinia TaxI... [more]
UPI001036EEAC2.140e-2048.31coatomer subunit epsilon-1-like n=1 Tax=Camellia s... [more]
A0A251TC83_HELAN2.310e-2054.22Coatomer subunit epsilon n=4 Tax=Asteraceae TaxID=... [more]
A0A507C522_9FUNG5.540e-2044.94Coatomer subunit epsilon n=1 Tax=Synchytrium micro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04733Coatomer_Ecoord: 1..88
e-value: 3.1E-27
score: 95.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..91
e-value: 3.6E-31
score: 111.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..62
IPR006822Coatomer, epsilon subunitPANTHERPTHR10805COATOMER SUBUNIT EPSILONcoord: 1..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112650contigH-elongata_contig112650:701..1925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112650.1033.1mRNA_H-elongata_contig112650.1033.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112650 701..1934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112650.1033.1 ID=prot_H-elongata_contig112650.1033.1|Name=mRNA_H-elongata_contig112650.1033.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
MLLNSSAVAKMHMGEFQEAESNLVEALSKRQNDPDTLVNLICCCRHMDKP
ASFIDRYVNQLKKNHPQHPYVKSLLNAETAFDRVAGNFAVVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR006822Coatomer_esu