prot_H-elongata_contig112296.1003.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112296.1003.1
Unique Nameprot_H-elongata_contig112296.1003.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
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BLAST of mRNA_H-elongata_contig112296.1003.1 vs. uniprot
Match: A0A6H5KFT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFT8_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.700e-13
Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 0 
Query:    1 FSGFGEEDGEVHEARVKKLKDSKKWTLVALKDLCTLLGLDKGGTKVRVSDRYPSHNLNP 59
            FSGF ++DG+  +AR+KKL +SKKWT+ AL+DLCTLLGL+KGG K  V DR  S   +P
Sbjct:   87 FSGFPDDDGK--DARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASP 143
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BLAST of mRNA_H-elongata_contig112296.1003.1 vs. uniprot
Match: D7G0W0_ECTSI (Similar to DEK oncogene (DNA binding) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W0_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 4.060e-13
Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 0 
Query:    1 FSGFGEEDGEVHEARVKKLKDSKKWTLVALKDLCTLLGLDKGGTKVRVSDRYPSHNLNP 59
            FSGF ++DG+  +AR+KKL +SKKWT+ AL+DLCTLLGL+KGG K  V DR  S   +P
Sbjct:   54 FSGFPDDDGK--DARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASP 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112296.1003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFT8_9PHAE2.700e-1359.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0W0_ECTSI4.060e-1359.32Similar to DEK oncogene (DNA binding) n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112296contigH-elongata_contig112296:281..463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112296.1003.1mRNA_H-elongata_contig112296.1003.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112296 281..463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112296.1003.1 ID=prot_H-elongata_contig112296.1003.1|Name=mRNA_H-elongata_contig112296.1003.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
FSGFGEEDGEVHEARVKKLKDSKKWTLVALKDLCTLLGLDKGGTKVRVSD
RYPSHNLNPK*
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