mRNA_H-elongata_contig11229.1000.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: D7FQQ5_ECTSI (4'-phosphopantetheinyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ5_ECTSI) HSP 1 Score: 191 bits (484), Expect = 1.760e-57 Identity = 101/131 (77.10%), Postives = 115/131 (87.79%), Query Frame = 1
Query: 1 FLGGRLAIRRAMVGMKEASLQPPS-AILHDQYGAPVLPDGVAASISHKRHVAVALVQPGCEGHIGVDIELPAVRRR-DLRRRVLTARECDSLGGVAGLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKDV 387
FLGGRLAIRRA+ GM++ S S AILH+Q GAPVLP+GV+ASISHK+H+AVALVQ GCEGH+G+DIELPAV+RR DLRRRVLT RECDSLGGV G+S++EEVLLRFSMKEAVYKAAHP L R L FKDV
Sbjct: 148 FLGGRLAIRRALNGMEDVSAAASSQAILHNQDGAPVLPEGVSASISHKQHLAVALVQSGCEGHLGIDIELPAVQRRLDLRRRVLTPRECDSLGGVDGMSDQEEVLLRFSMKEAVYKAAHPFLHRPLGFKDV 278
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: A0A7S2SQZ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQZ6_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.330e-25 Identity = 74/137 (54.01%), Postives = 87/137 (63.50%), Query Frame = 1
Query: 1 FLGGRLAIRRAMVGMKEASLQPPSAILHDQYGAPVLPDGVAASISHKRHVAVALVQPG-CE---GHIGVDIE--LPAVRRRDLRRRVLTARECDSLGGV--AGLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKDV 387
FLGGR+AIRRAM G K A P I GAPVL +G+ SISHKRHVAVALVQ G C G IGVDIE P + L +RVL E D LG + GL++++EVLL FS KEAVYKA P L R + F++V
Sbjct: 126 FLGGRVAIRRAM-GAKLAETVGP--IHRSSRGAPVLSNGIRGSISHKRHVAVALVQTGPCSPVGGRIGVDIEDLHPTRYKGRLAQRVLLEEEVDKLGSLESTGLTKDQEVLLAFSFKEAVYKAIDPFLERFVSFQEV 259
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: A0A4D9CTH4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTH4_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.050e-24 Identity = 65/138 (47.10%), Postives = 91/138 (65.94%), Query Frame = 1
Query: 1 FLGGRLAIRRAMVGMKEASLQPPSAILHDQYGAPVLPDGVAASISHKRHVAVALVQPGCE------GHIGVDIEL--PAVRRRDLRRRVLTARECDSLGGVA--GLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKD 384
FLGGRLA+RR++ + + ++ A+L D+ GAP LP V ASISHK+ +A+ L++ E +IGVDIE+ P + RVLT RE D LGG+A G+S E E+LLRFS+KE+VYKA +P LRR + F++
Sbjct: 114 FLGGRLALRRSLRKLPQP-IRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQE 250
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: W7TPT1_9STRA (4-phosphopantetheinyl transferase entd n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT1_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.500e-24 Identity = 65/138 (47.10%), Postives = 91/138 (65.94%), Query Frame = 1
Query: 1 FLGGRLAIRRAMVGMKEASLQPPSAILHDQYGAPVLPDGVAASISHKRHVAVALVQPGCE------GHIGVDIEL--PAVRRRDLRRRVLTARECDSLGGVA--GLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKD 384
FLGGRLA+RR++ + + ++ A+L D+ GAP LP V ASISHK+ +A+ L++ E +IGVDIE+ P + RVLT RE D LGG+A G+S E E+LLRFS+KE+VYKA +P LRR + F++
Sbjct: 198 FLGGRLALRRSLRKLPQP-IRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQE 334
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: A0A7S4T7K3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T7K3_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.620e-24 Identity = 61/137 (44.53%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 1 FLGGRLAIRRAMVGMKEASLQP-------PSAILHDQYGAPVLPDGVAASISHKRHVAVALVQPGCEGH--IGVDIELPAVRRRDLRRRVLTARECDSLGGVAGLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKD 384
F GRLA+R A++ +S +AIL D++G P +P GV SI+HK+ VALV +GVD+E RR + RR+LT E +LG V G+++EEEVLLRFS+KE+VYKA HPLL + + FK+
Sbjct: 163 FFVGRLAMRHALLASHTSSFAALPAVSADDAAILKDEHGRPTMPKGVLGSITHKKKTGVALVSSASTRRRGVGVDLEQTCTGRRSIARRILTEGEILNLGCVEGVTKEEEVLLRFSLKESVYKAMHPLLNQYIGFKE 299
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: A0A838HLQ8_9BACT (4'-phosphopantetheinyl transferase superfamily protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A838HLQ8_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 5.610e-23 Identity = 59/130 (45.38%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 1 FLGGRLAIRRAMVGMKEASLQPPSAILHDQYGAPVLPDGVAASISHKRHVAVALVQPGCEGHIGVDIELPAVRRRDLRRRVLTARECDSLGGVAGLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKDVS 390
++GGR+A+ RA+ E + Q AIL + GAP LP G+A S+SHK +AVALV P +G+DIE V R ++ R VLT E L + EVLLRFS KEAVYKA P +RR + F++V+
Sbjct: 55 WVGGRVALHRAL----ERAGQQAGAILATERGAPSLPPGIAGSVSHKEGLAVALVAPAAGWRVGIDIERMRVPRAEIERHVLTEGERQELTALRQEERWREVLLRFSAKEAVYKALDPFVRRYVSFQEVT 180
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: A0A7S2P1V1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P1V1_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.670e-22 Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 70 SAILHDQYGAPVLPDGVAASISHKRHVAVALVQPGCEGHI-------GVDIELPAVRRRDLRRRVLTARECDSLGGVAGLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKD 384
SAIL D YG P +P G SISHKR AVALVQ + GV +++ +R+ + +RVLT+ E LG +A +SEEEEVLLRFS+KE+VYKA HP++ + + F++
Sbjct: 90 SAILKDDYGRPTVPKGFLGSISHKRSTAVALVQADKSNCVEMQKDMKGVGVDIEDIRKTRIAKRVLTSTELIDLGNLASVSEEEEVLLRFSLKESVYKAIHPIVNQYVGFQE 201
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: A0A7S2A1R9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1R9_TRICV) HSP 1 Score: 96.3 bits (238), Expect = 1.770e-21 Identity = 59/126 (46.83%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 37 VGMKEASLQPPSAILHDQYGAPVLPDGVAASISHKRHVAVALV------QPGCEGH----IGVDIELPAVRRRDLRRRVLTARECDSLGGVAGLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKD 384
+G +S PP IL D +G P +PDG SISHKR VALV + G G +GVDIE RR + R+VLT E D LG + G++ EEVLLRFS+KE+VYKA HPLL + + F++
Sbjct: 121 IGPSSSSSFPP--ILRDGHGRPTVPDGFLGSISHKRVTGVALVSRDDDNKGGKRGRPRRGVGVDIEQTRSRRMSIERKVLTKGELDDLGKLEGVTRSEEVLLRFSLKESVYKALHPLLTQYIGFQE 244
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: A0A7S3PAQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PAQ3_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.790e-21 Identity = 60/133 (45.11%), Postives = 80/133 (60.15%), Query Frame = 1
Query: 1 FLGGRLAIRRAMVGMKEASLQPPSAILHDQYGAPVLPDGVAASISHKRHVAVALVQPGCEGH-----IGVDIELPAVRRRDLRRRVLTARECDSLGGVAGLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKD 384
F+GGRLA+R+AM E + IL D +G P +P SISHK VAVA+V P IGVD+E+ R + R+LT E +LG V G+ EEEVLLRFS+KEA+YKA HPL+ + + F++
Sbjct: 16 FVGGRLALRKAM----ECQMHD-CVILKDAHGRPNIPRSFRGSISHKGDVAVAMVAPATTERETVWAIGVDLEVRQKGRSRIGNRILTVSEQGNLGFVDGILAEEEVLLRFSLKEALYKAMHPLICQYVGFQE 143
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Match: A0A7S1GJ90_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJ90_CYCTE) HSP 1 Score: 97.1 bits (240), Expect = 2.860e-21 Identity = 62/137 (45.26%), Postives = 89/137 (64.96%), Query Frame = 1
Query: 1 FLGGRLAIRRAMVGMKEASLQPPSAILHDQYGAPVLPDGVAASISHKRHVAVALV---------QPGCEGHIGVDIELPAVRRRDLRRRVLTARECDSLGGVAGLSEEEEVLLRFSMKEAVYKAAHPLLRRSLVFKD 384
F GRLA+R A+ +++ S ++IL DQ+G P++P G SISHKR+V VALV EG +G+DIE + +RD+ ++VLT E LG V G++ EEEVLLRFSMKE++YKA HP+L + + F++
Sbjct: 159 FFVGRLAMREAL-RLEQNSAH--ASILKDQHGRPIVPRGYLGSISHKRNVGVALVTTTSTTSDESETVEG-VGIDIE-QTLTKRDIAKKVLTPTEISELGKVEGVTIEEEVLLRFSMKESLYKAMHPILCQYVGFQE 290 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11229.1000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11229.1000.1 >prot_H-elongata_contig11229.1000.1 ID=prot_H-elongata_contig11229.1000.1|Name=mRNA_H-elongata_contig11229.1000.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp FLGGRLAIRRAMVGMKEASLQPPSAILHDQYGAPVLPDGVAASISHKRHVback to top mRNA from alignment at H-elongata_contig11229:1426..2238+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11229.1000.1 ID=mRNA_H-elongata_contig11229.1000.1|Name=mRNA_H-elongata_contig11229.1000.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=813bp|location=Sequence derived from alignment at H-elongata_contig11229:1426..2238+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11229:1426..2238+ >mRNA_H-elongata_contig11229.1000.1 ID=mRNA_H-elongata_contig11229.1000.1|Name=mRNA_H-elongata_contig11229.1000.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at H-elongata_contig11229:1426..2238+ (Himanthalia elongata Himel1 dioecious)back to top |