prot_H-elongata_contig112269.997.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112269.997.1
Unique Nameprot_H-elongata_contig112269.997.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: UPI001C155DC1 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C155DC1)

HSP 1 Score: 66.6 bits (161), Expect = 1.630e-12
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   10 FPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRISL 61
            FPN+ KL++L   +P SSVECERGFS QN+IK+K RN L+ + L+ LMRISL
Sbjct:   56 FPNIIKLIQLVYCIPFSSVECERGFSRQNQIKTKSRNSLTTDTLDRLMRISL 107          
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: A0A8H3LT90_9GLOM (Zinc finger protein 862-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3LT90_9GLOM)

HSP 1 Score: 66.2 bits (160), Expect = 4.210e-12
Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   10 FPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRISL 61
            FPN+ KL+++   +P SSVECERGFS QN+IK+K RN L+   L++LMR+SL
Sbjct:   86 FPNIIKLIQIVYCIPFSSVECERGFSRQNKIKTKDRNSLATNTLDMLMRVSL 137          
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: C3Z810_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z810_BRAFL)

HSP 1 Score: 65.9 bits (159), Expect = 4.460e-11
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    1 LKALPGGAYFPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRISL 61
            L+ + G   FPN+ KL  +  +LP  + +CERGFS QNRIK+++RN LSV+RL++LMRI++
Sbjct:  305 LERVHGSELFPNLLKLATVGRLLPMHTADCERGFSTQNRIKTRLRNALSVKRLDILMRIAI 365          
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: A0A3B1J4P0_ASTMX (TTF-type domain-containing protein n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J4P0_ASTMX)

HSP 1 Score: 64.7 bits (156), Expect = 1.130e-10
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    5 PGGAYFPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRIS 60
            P  + F N++ L ++ +VLP S+ +CERGFSAQNRIKSKVRN L+V  +E L+RIS
Sbjct:  550 PYCSDFQNIFHLAEIMLVLPISAAQCERGFSAQNRIKSKVRNSLNVSTVEDLVRIS 605          
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: A0A015J8B3_RHIIW (Uncharacterized protein n=13 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015J8B3_RHIIW)

HSP 1 Score: 63.9 bits (154), Expect = 2.100e-10
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   10 FPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRISL 61
            FPN+ KL+++   +P SSVECERGFS QN+IK+K RN L+   L++LM ISL
Sbjct:  544 FPNIIKLIQIAYCIPFSSVECERGFSRQNKIKTKDRNSLATNTLDMLMCISL 595          
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: UPI001C19C353 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C19C353)

HSP 1 Score: 63.9 bits (154), Expect = 2.120e-10
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   10 FPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRISL 61
            FPN+ KL+++   +P SSVECERGFS QN+IK+K RN L+   L++LM ISL
Sbjct:  614 FPNIIKLIQIAYCIPFSSVECERGFSRQNKIKTKDRNSLATNTLDMLMCISL 665          
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: UPI001E1D51CC (zinc finger protein 862-like n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D51CC)

HSP 1 Score: 63.5 bits (153), Expect = 2.880e-10
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
Query:   10 FPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRIS 60
            FPN+  ++K C VLP SSV+CERGFS QNRI S++RNRL+ + L+  MRIS
Sbjct:  551 FPNMVTILKCCSVLPMSSVKCERGFSTQNRIMSRLRNRLNNQALDDQMRIS 601          
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: A0A2Z6RJ54_9GLOM (Zinc finger protein 862-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RJ54_9GLOM)

HSP 1 Score: 62.4 bits (150), Expect = 4.110e-10
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   10 FPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRISL 61
            F N+ KL++L   +P SSVECERGFS QN+IK+K RN L+ + L+ LMRISL
Sbjct:  171 FLNIIKLIQLIYCIPFSSVECERGFSRQNQIKTKNRNSLTTDTLDRLMRISL 222          
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: UPI0011C0D78D (zinc finger protein 862-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C0D78D)

HSP 1 Score: 58.5 bits (140), Expect = 1.970e-9
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    5 PGGAYFPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRISL 61
            P    + N+ +LV + +VLP S+ +CERGFSAQNRIK+  R+ L+V   E LMRISL
Sbjct:   32 PYKTDYRNILELVMIMLVLPISAAQCERGFSAQNRIKTSTRSSLAVSTTEDLMRISL 88          
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Match: A0A8B6EWY7_MYTGA (Nuclear pore complex protein Nup188 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EWY7_MYTGA)

HSP 1 Score: 59.7 bits (143), Expect = 2.110e-9
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   10 FPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSVERLELLMRISL 61
            FPN   L+++  +LP SSVECERGFS QN IK+K+R  L ++ L+ LMRISL
Sbjct:   99 FPNAISLMEISRILPVSSVECERGFSRQNIIKTKLRCSLGIDALDQLMRISL 150          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112269.997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C155DC11.630e-1261.54Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
A0A8H3LT90_9GLOM4.210e-1257.69Zinc finger protein 862-like n=1 Tax=Rhizophagus c... [more]
C3Z810_BRAFL4.460e-1150.82Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
A0A3B1J4P0_ASTMX1.130e-1057.14TTF-type domain-containing protein n=1 Tax=Astyana... [more]
A0A015J8B3_RHIIW2.100e-1057.69Uncharacterized protein n=13 Tax=Rhizophagus irreg... [more]
UPI001C19C3532.120e-1057.69Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
UPI001E1D51CC2.880e-1060.78zinc finger protein 862-like n=2 Tax=Mercenaria me... [more]
A0A2Z6RJ54_9GLOM4.110e-1059.62Zinc finger protein 862-like n=1 Tax=Rhizophagus c... [more]
UPI0011C0D78D1.970e-952.63zinc finger protein 862-like n=1 Tax=Sparus aurata... [more]
A0A8B6EWY7_MYTGA2.110e-957.69Nuclear pore complex protein Nup188 n=1 Tax=Mytilu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 10..57
e-value: 1.8E-7
score: 30.9
NoneNo IPR availablePANTHERPTHR46880FAMILY NOT NAMEDcoord: 6..61
NoneNo IPR availablePANTHERPTHR46880:SF5E3 SUMO-PROTEIN LIGASE KIAA1586coord: 6..61
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112269contigH-elongata_contig112269:1835..2017 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112269.997.1mRNA_H-elongata_contig112269.997.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112269 1835..2017 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112269.997.1 ID=prot_H-elongata_contig112269.997.1|Name=mRNA_H-elongata_contig112269.997.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
LKALPGGAYFPNVYKLVKLCIVLPHSSVECERGFSAQNRIKSKVRNRLSV
ERLELLMRISL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf