mRNA_H-elongata_contig112176.991.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: D8LTT5_ECTSI (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT5_ECTSI) HSP 1 Score: 225 bits (574), Expect = 1.080e-70 Identity = 135/212 (63.68%), Postives = 157/212 (74.06%), Query Frame = 1
Query: 1 LRAGDRVVDLATGTADVAILIAGELATLEGSVDSGTAISGKSGLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRPESGVVALAASTFIRYGAPFLGRMMSGSRAEYNHLKNSILGFPTVAEWVELMAEAG 636
LRAGDRVVD+ATGTADVAI+I+ ELA LEG+ + I G VIGIDPS RML+VGR+K A+AGLSS RV+LQIGDAQDL DI DGSVDK+TMAFGIRNVP+R+ AL EIRRI+A P L + AS SSVVAILELQ PESG++A A FI+YGAP LG +MSG+ AEY HLKNSIL FP+V+EW LM +AG
Sbjct: 34 LRAGDRVVDMATGTADVAIMISEELAKLEGAPEG--TIPGTVEPEVIGIDPSARMLEVGREKVAEAGLSS-RVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRSKALEEIRRIMATPA---LDAGAQGATEDAGGAGGHASSSSVVAILELQDPESGLLASATRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMGDAG 239
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: A0A6H5KFI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI5_9PHAE) HSP 1 Score: 226 bits (576), Expect = 2.240e-70 Identity = 134/212 (63.21%), Postives = 156/212 (73.58%), Query Frame = 1
Query: 1 LRAGDRVVDLATGTADVAILIAGELATLEGSVDSGTAISGKSGLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRPESGVVALAASTFIRYGAPFLGRMMSGSRAEYNHLKNSILGFPTVAEWVELMAEAG 636
LR GDRVVD+ATGTADVAI+I+ ELA LEG+ ISG VIGIDPS RML+VGR+K A+AGL S R++LQIGDAQDL DI DGSVDK+TMAFGIRNVP+R ALREIRRI+A P L + AS SSVVAILELQ PESG++A A+ FI+YGAP LG +MSG+ AEY HLKNSIL FP+V+EW LM +AG
Sbjct: 80 LRDGDRVVDMATGTADVAIMISEELAKLEGTPGDRGTISGTVEPEVIGIDPSARMLEVGREKVAEAGLCS-RIRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIMATPA---LDAGAHGATDDAGGAGGQASSSSVVAILELQDPESGLLASASRAFIKYGAPLLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAG 287
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: A0A7S0DP24_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DP24_9EUKA) HSP 1 Score: 133 bits (335), Expect = 9.870e-35 Identity = 87/212 (41.04%), Postives = 118/212 (55.66%), Query Frame = 1
Query: 1 LRAGDRVVDLATGTADVAILIAGELATLEGSVDSGTAISGKSGLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRPESGVVALAASTFIRYGAPFLGRMMSGSRAEYNHLKNSILGFPTVAEWVELMAEAG 636
L+ GDRV+DLATGTADVAIL A + + G+ V+GIDPS M+++GR K + GL + R+ LQIGDA L I D S DKV++AFGIRN+P+R AL+EIRR++ S S VA+LE P G++ A +IR+ P LG ++SG EY HL++SI FP E+ +M +AG
Sbjct: 77 LQDGDRVLDLATGTADVAILEAKD----------------EKGVEVLGIDPSENMIELGRSKILNEGLEN-RISLQIGDAMALDTIQDASFDKVSIAFGIRNIPDRLQALKEIRRVVRD------------------------SPGSRVAVLEFTEPHGGIIEFFARLYIRHVVPLLGSILSGKWREYMHLESSIAEFPAPDEFKLIMEKAG 247
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: A0A7S2V4B4_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4B4_9STRA) HSP 1 Score: 132 bits (331), Expect = 4.890e-34 Identity = 92/213 (43.19%), Postives = 117/213 (54.93%), Query Frame = 1
Query: 13 DRVVDLATGTADVAILIAG---ELATLEGSV---DSGTAISGKSGLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRPESGVVALAASTFIRYGAPFLGRMMSGSRAEYNHLKNSILGFPTVAEWVELMAEA 633
D+V+DLATGTADVAIL+ ELA G+ + G+ +GK V+GIDPS MLD GRKK + L V LQ+GDAQDL + S DKVTM+FGIRNVP++ AL EI R++ E +S V I+E P+ GV+A + FI+Y P LG SGS EY+HL+ SI+ FP W E M A
Sbjct: 80 DKVLDLATGTADVAILVGQKITELAKKSGNQHCSNDGSCPAGKQ--QVVGIDPSANMLDNGRKKVTEKELDQV-VTLQLGDAQDLKGLKSSSFDKVTMSFGIRNVPDQDAALSEIYRVVKKSE------------------------NSRVVIMEFHNPQKGVMAPMSRFFIQYITPVLGYFFSGSLDEYSHLQKSIMEFPDPDVWTEKMKAA 265
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: A0A7S2XAZ6_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XAZ6_9EUKA) HSP 1 Score: 129 bits (325), Expect = 2.060e-33 Identity = 85/211 (40.28%), Postives = 115/211 (54.50%), Query Frame = 1
Query: 1 LRAGDRVVDLATGTADVAILIAGELATLEGSVDSGTAISGKSGLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRPESGVVALAASTFIRYGAPFLGRMMSGSRAEYNHLKNSILGFPTVAEWVELMAEA 633
LR GD V+DLATGTADVAIL A + G V+GIDPS +M+ GR+K L +V L++GDA +L DI GS DK++MAFGIRN+P+R ALRE+RR++ S S VAILE P+ G++ A IRY P LG ++SG EY HL++SI FP+ ++ ++M +A
Sbjct: 72 LRRGDSVLDLATGTADVAILEA----------------QAEPGAKVLGIDPSAKMVGRGREKVQGLDLGE-QVTLRVGDAMNLQDIESGSFDKLSMAFGIRNIPDRPLALREMRRVVRD------------------------SPDSRVAILEFTEPQGGILQFCARMMIRYVLPRLGALLSGKWDEYMHLQDSIAAFPSATDFADVMEKA 241
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: A0A835YHX6_9STRA (UbiE/COQ5 methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX6_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.260e-32 Identity = 91/215 (42.33%), Postives = 123/215 (57.21%), Query Frame = 1
Query: 1 LRAGDRVVDLATGTADVAILIAGEL-ATLEGSVDSGTAISGKS--GLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRPESGVVALAASTFIRYGAPFLGRMMSGSRAEYNHLKNSILGFPTVAEWVELMAEAG 636
L+ GDRV+DLATGTADVAIL L A E + SG+ +GK G+ V+GIDPS ML GR K A GL V+LQ+GDAQ L ++ + S DK++M+FGIRNVP+RA ALREI R +AAP + VAI++L P +G+ A +++ LG ++SG+ +Y HL+ SI FP W + M +AG
Sbjct: 53 LQPGDRVLDLATGTADVAILEGEALRAMAEAAASSGSKGAGKQKKGM-VVGIDPSANMLAHGRDKVAAKGLDGI-VKLQLGDAQALKELSNRSFDKISMSFGIRNVPDRAKALREIHR-VAAP-------------------------GATVAIMDLHAPTTGIFAPLGRAAVKFLPTVLG-LLSGAPDQYGHLERSIFAFPEPDAWQDAMRDAG 238
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: F0XXU4_AURAN (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXU4_AURAN) HSP 1 Score: 124 bits (312), Expect = 6.370e-32 Identity = 85/213 (39.91%), Postives = 115/213 (53.99%), Query Frame = 1
Query: 1 LRAGDRVVDLATGTADVAILIAGELATLEGSVDSGTAISGKSGLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRPESGVVALAASTFIRYGAPFLGRMMSGSR-AEYNHLKNSILGFPTVAEWVELMAEAG 636
L DRV+DLATGTADVAIL G +G V+G+DPS ML +GR K A AGL + V+L +GDA DL + DG DK++++FGIRN+P+ GALRE+RR +AAP + +A++E P GV+A A FI++ P LG ++SG+R EYNHL+ SI FP + + AG
Sbjct: 34 LAPSDRVLDLATGTADVAIL------------------EGAAGPAVLGVDPSANMLAIGRTKVAAAGLDGT-VELALGDATDLEHLADGGFDKISISFGIRNIPDVDGALREMRR-VAAP-------------------------GATLAVMEFCEPTEGVLAPIARLFIKHVVPRLGALLSGARWDEYNHLQRSIAAFPPPPAFRSKVERAG 201
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: A0A850B4E0_9DELT (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A850B4E0_9DELT) HSP 1 Score: 123 bits (309), Expect = 3.500e-31 Identity = 91/212 (42.92%), Postives = 114/212 (53.77%), Query Frame = 1
Query: 1 LRAGDRVVDLATGTADVAILIAGELATLEGSVDSGTAISGKSGLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRPESGVVALAASTFIRYGAPFLGRMMSGSRAEYNHLKNSILGFPTVAEWVELMAEAG 636
LR G V+DLATGT D+AILIA E + VIG+DPS RML+V +K D GL R++L+ GDAQ L D+PD SVD V+MAFGIRNVP+R ALREI R+ K SG+ V ILEL P GV+ A IR P +G +SGS AEY +L+ SI FP E+ +M+ +G
Sbjct: 50 LRPGATVLDLATGTGDLAILIAHE----------------NPDVRVIGVDPSARMLEVAARKVRDHGLEK-RIELREGDAQAL-DLPDASVDAVSMAFGIRNVPDRPRALREIARVT------KNSGR--------------------VGILELSEPREGVLGALARFHIRKVVPRIGGALSGS-AEYRYLQESIAAFPPPDEFASMMSASG 216
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: A0A7S1ZD49_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZD49_TRICV) HSP 1 Score: 127 bits (318), Expect = 3.980e-31 Identity = 87/203 (42.86%), Postives = 116/203 (57.14%), Query Frame = 1
Query: 16 RVVDLATGTADVAILIAGELATLEGSVDSGTAISGKSGLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRP--ESGVVALAASTFIRYGAPFLGRMMSGSRAEYNHLKNSILGFPTVAEWVE 618
+++DLATGTADVAIL+A A + + + T+ V+GIDPS MLDVG +K A L+ + V L+IGDA++L + S D VTMAFGIRNVP R AL EIRR++ P+ K G +AILE P +SG++ AA FIR P LG +SG+ EY HL+NSI FP+ ++VE
Sbjct: 193 KILDLATGTADVAILLAERAAEVNAAAAAATS--------VLGIDPSRSMLDVGIEKVASKSLTET-VTLRIGDARNLEGLKTSSYDAVTMAFGIRNVPERTAALCEIRRVLKKPDLKK------------------GYGGGKLAILEFSEPGDDSGIMGYAARFFIRRVVPILGATLSGAPREYVHLQNSIKEFPSKEKFVE 368
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Match: A0A7R9W2N3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2N3_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.340e-30 Identity = 87/207 (42.03%), Postives = 120/207 (57.97%), Query Frame = 1
Query: 10 GDRVVDLATGTADVAILIAGELATLEGSVDSGTAISGKSGLPVIGIDPSGRMLDVGRKKAADAGLSSSRVQLQIGDAQDLVDIPDGSVDKVTMAFGIRNVPNRAGALREIRRIIAAPEPPKLSGKEDHLSSSNSDKEASASGSSVVAILELQRPE--SGVVALAASTFIRYGAPFLGRMMSGSRAEYNHLKNSILGFPTVAEWVELM 624
G R++DLATGTADVAIL+ GE A + +G+ S ++G+DPS M++VGR+K + LS + LQIGDA+DL + D S D TM+FGIRNVP R AL EI R++ KE + S +N + ILE P+ +GV+A A FIR+ P +G ++SG+ EY HL+NSI FP+ E+ LM
Sbjct: 91 GARILDLATGTADVAILL-GEAAAEAEAEGTGSDAS----TTILGVDPSANMIEVGREKVSRRSLSEV-ITLQIGDARDLKGLKDSSFDAATMSFGIRNVPERDVALCEIHRVLK---------KEGNKSKNNI--------GGKLGILEFSEPQPGTGVLAYLARLFIRHVVPAMGAVLSGAPREYMHLQNSIREFPSPEEFKALM 274 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112176.991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig112176.991.1 >prot_H-elongata_contig112176.991.1 ID=prot_H-elongata_contig112176.991.1|Name=mRNA_H-elongata_contig112176.991.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp LRAGDRVVDLATGTADVAILIAGELATLEGSVDSGTAISGKSGLPVIGIDback to top mRNA from alignment at H-elongata_contig112176:92..1746+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig112176.991.1 ID=mRNA_H-elongata_contig112176.991.1|Name=mRNA_H-elongata_contig112176.991.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1655bp|location=Sequence derived from alignment at H-elongata_contig112176:92..1746+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig112176:92..1746+ >mRNA_H-elongata_contig112176.991.1 ID=mRNA_H-elongata_contig112176.991.1|Name=mRNA_H-elongata_contig112176.991.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1272bp|location=Sequence derived from alignment at H-elongata_contig112176:92..1746+ (Himanthalia elongata Himel1 dioecious)back to top |