prot_H-elongata_contig112083.981.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112083.981.1
Unique Nameprot_H-elongata_contig112083.981.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
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BLAST of mRNA_H-elongata_contig112083.981.1 vs. uniprot
Match: D7G642_ECTSI (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G642_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.520e-74
Identity = 114/165 (69.09%), Postives = 137/165 (83.03%), Query Frame = 0 
Query:    1 SLCFFHQLVNALARSRKVYVTCCEPGAKVILGKDLK--ADVRNLSSNDLPPAKMGDIQVVITPADQGQWKLAKTMSEAAPVVIVNGVFVNGYVPFEPVYYFKPISGFSSVVGSVVRQYPGTFTAYLAGSNKVVPCEAGLIRQGDVRRPDLRSAANALMAAYQEQQ 163
            +L F  +LV A+ +S+K YV CC+PGAK   G  ++  ADVR++++ +LPPAK GD+ VV+TPADQGQWKLAK M+E   VVIVNGVFVNGYVPFEPVYYFKPISG+    GSVVRQYPG FTAYLA SNKVVPC+AGL++QGD+RRPDLRSAANAL AA++EQQ
Sbjct:  130 TLSFAKKLVGAIGKSKKAYVVCCQPGAKADFGIGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETTTVVIVNGVFVNGYVPFEPVYYFKPISGW----GSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQ 290
[Close]
BLAST of mRNA_H-elongata_contig112083.981.1 vs. uniprot
Match: A0A7S2XUE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUE4_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.140e-35
Identity = 69/162 (42.59%), Postives = 96/162 (59.26%), Query Frame = 0 
Query:    4 FFHQLVNALARSR-KVYVTCCEPGAKVILGKDL-----KADVRNLSSNDLPPAKMGDIQVVITPADQGQWKLAKTMSEAAPVVIVNGVFVNGYVPFEPVYYFKPISGFSSVVGSVVRQYPGTFTAYLAGSNKVVPCEAGLIRQGDVRRPDLRSAANALMAAY 159
            F  +LV +L  SR KV+V CCEPG K +L + +     K +V  LSS +LP A   D+ + +TP D  QWK+A  + E APVV+VNG+F NGY   EPVYY KP SG+    G ++RQ+P  FT YL G  K +  +  ++  G++RRPD       L + +
Sbjct:  120 FAKKLVTSLTSSRSKVWVVCCEPGYKKMLEEAIGTQNKKVEVVPLSSRNLPDASPKDVLIFLTPGDDSQWKIAAKLGETAPVVVVNGLFNNGYGALEPVYYLKPFSGW----GYLMRQFPNDFTVYLTGEKKPLDLKVTMMEMGNLRRPDSTVVGKVLQSEF 277
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112083.981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G642_ECTSI1.520e-7469.09DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S2XUE4_9STRA5.140e-3542.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112083contigH-elongata_contig112083:30..1229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112083.981.1mRNA_H-elongata_contig112083.981.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112083 30..1229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112083.981.1 ID=prot_H-elongata_contig112083.981.1|Name=mRNA_H-elongata_contig112083.981.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
SLCFFHQLVNALARSRKVYVTCCEPGAKVILGKDLKADVRNLSSNDLPPA
KMGDIQVVITPADQGQWKLAKTMSEAAPVVIVNGVFVNGYVPFEPVYYFK
PISGFSSVVGSVVRQYPGTFTAYLAGSNKVVPCEAGLIRQGDVRRPDLRS
AANALMAAYQEQQASRG*
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