mRNA_H-elongata_contig11206.978.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: D8LF38_ECTSI (Divalent metal transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF38_ECTSI) HSP 1 Score: 266 bits (680), Expect = 1.700e-83 Identity = 124/150 (82.67%), Postives = 140/150 (93.33%), Query Frame = 1
Query: 1 VEDEEEHLHISNQGEVNYIPDEPEGKWFHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCLLT 450
+ +++E LHISN+G+V+Y+PDEPEGKW HWPTL AYVGPGFLVCIAYLDPGNLEADLQ GAYTGYQLLWVLLLAH++GLVLQSLAAR+GVVTGTHLADVCR +Y RP A++LWVM E AIIGSDIQEV+GSAIGLQILFGIPLW+GCLLT
Sbjct: 61 IAEDDEGLHISNKGDVHYVPDEPEGKWLHWPTLAAYVGPGFLVCIAYLDPGNLEADLQTGAYTGYQLLWVLLLAHILGLVLQSLAARIGVVTGTHLADVCRTHYDRPAALLLWVMMEVAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLT 210
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: A0A835YZC9_9STRA (Divalent metal transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC9_9STRA) HSP 1 Score: 221 bits (564), Expect = 2.190e-66 Identity = 101/142 (71.13%), Postives = 123/142 (86.62%), Query Frame = 1
Query: 25 HISNQGEVNYIPDEPEGKWFHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCLLT 450
H++N+G+V IPDEPEG W W TL+AY+GPGFL+CIAYLDPGNLEADLQ GAYTGYQL+WVLLLAH+ GL+LQS+A+RLGVVTG HLA + R+ Y RP +++LW+M E AIIGSDIQEV+GSAI LQIL G+PLW GC++T
Sbjct: 17 HVTNRGDVWQIPDEPEGAWISWDTLLAYLGPGFLMCIAYLDPGNLEADLQTGAYTGYQLIWVLLLAHMFGLLLQSMASRLGVVTGNHLAGIARLNYKRPASLLLWLMAELAIIGSDIQEVLGSAIALQILTGVPLWAGCVIT 158
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: A0A7S2Y3E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3E1_9STRA) HSP 1 Score: 201 bits (511), Expect = 7.260e-59 Identity = 91/132 (68.94%), Postives = 111/132 (84.09%), Query Frame = 1
Query: 55 IPDEPEGKWFHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCLLT 450
+PDEPEG W WPTL AY GPGFL+C+A+LDPGNLEADLQVG YTGYQL+W++L+A ++GLV+Q LA R+GVVTG HLA CR YP+ IA LW+MTE AIIGSDIQEV+G+AI L +LF +PLWLGC++T
Sbjct: 69 VPDEPEGAWISWPTLWAYTGPGFLMCVAFLDPGNLEADLQVGGYTGYQLIWIMLIATILGLVMQILALRIGVVTGKHLAVHCRENYPKYIAYPLWIMTEIAIIGSDIQEVIGTAIALWVLFKLPLWLGCVIT 200
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: A0A7S2X831_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X831_9EUKA) HSP 1 Score: 177 bits (450), Expect = 1.610e-54 Identity = 87/131 (66.41%), Postives = 105/131 (80.15%), Query Frame = 1
Query: 55 IPDEPEG-KWFHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCL 444
IP+E + KWF + AYVGPG+L+ IAY+DPGNLE+DLQ GAYTGYQLLWVL ++ +GL Q LAARLGVVTG +LA +CR+ YPR ++ LWVMTE AIIGSDIQE++GSA+ QILFG PLWLGCL
Sbjct: 23 IPEEEDKTKWFSFKQFWAYVGPGWLMSIAYVDPGNLESDLQAGAYTGYQLLWVLFMSTAVGLYFQILAARLGVVTGRNLAQMCRLAYPRWASLGLWVMTELAIIGSDIQEIIGSAVAFQILFGFPLWLGCL 153
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: A0A8K1CE46_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE46_PYTOL) HSP 1 Score: 189 bits (479), Expect = 1.920e-54 Identity = 93/138 (67.39%), Postives = 107/138 (77.54%), Query Frame = 1
Query: 40 GEVNYIPDEPEGKWFHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCLLTG 453
GEV +EP WF W TL AY GPG+L+ IAY+DPGNLE+DLQ GAY GYQL+WVL + VMG LQ LAARLGVVTG +LA+VC YPR +++LWVMTE AIIGSDIQEV+GSAI QILF PLWLGCL+TG
Sbjct: 53 GEVQAPDEEPSTHWFSWRTLWAYAGPGWLMSIAYVDPGNLESDLQAGAYGGYQLIWVLFASTVMGFYLQILAARLGVVTGKNLAEVCTSEYPRWASLVLWVMTEIAIIGSDIQEVLGSAIAFQILFNFPLWLGCLITG 190
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: A0A7J6RAF5_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RAF5_PEROL) HSP 1 Score: 173 bits (439), Expect = 3.090e-52 Identity = 83/132 (62.88%), Postives = 103/132 (78.03%), Query Frame = 1
Query: 55 IPDEPEGKWFHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCLLT 450
IP +P G F + T Y GPG+L+ +AYLDPGNLEADLQ GA+TGYQ+LWVLLLAH++GL+LQ L+ RL VTG HLA+ CR YPR A +LW+MTE AIIGSDIQEV+G+AI ++LF IPLW G ++T
Sbjct: 50 IPIDPPGVKFSFRTFFKYTGPGWLMSLAYLDPGNLEADLQSGAFTGYQMLWVLLLAHIVGLILQVLSCRLAAVTGEHLAEHCRARYPRWTARVLWIMTEIAIIGSDIQEVLGTAIAFRVLFNIPLWAGTIIT 181
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: A0A812YDR2_SYMPI (Nramp1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812YDR2_SYMPI) HSP 1 Score: 182 bits (462), Expect = 4.190e-52 Identity = 87/142 (61.27%), Postives = 109/142 (76.76%), Query Frame = 1
Query: 28 ISNQGEVNYIPDEPEGKWFHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCLLTG 453
S E +P +P +F W T +AYVGPG+L+ +AYLDPGNLE+DLQ GA+TG+ LLWVLLL V GL+LQ LAARL VVTG LA CR+ YPRP++++LW+MTE AIIG+DIQEVVG+ I L++LFG PLW+G L TG
Sbjct: 22 FSESPEAELMPKDPGDIYFSWRTFLAYVGPGWLMSLAYLDPGNLESDLQSGAFTGHSLLWVLLLCTVAGLILQVLAARLAVVTGRDLAQTCRLGYPRPLSLLLWIMTELAIIGADIQEVVGTGIALRVLFGWPLWVGSLATG 163
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: A0A7S3YLW2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLW2_HETAK) HSP 1 Score: 182 bits (462), Expect = 4.340e-52 Identity = 81/132 (61.36%), Postives = 107/132 (81.06%), Query Frame = 1
Query: 55 IPDEPEGKWFHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCLLT 450
+P +P G WF W TL AY GPG L+ IA+LDPGNLEADLQ GAYTGYQL+WVL LA +G+++Q LAA++GVVTG H+A++C YPR +++ LW M E A+IGSDIQEV+G+A+ L +LFG+PLW+GC++T
Sbjct: 15 VPLDPPGVWFRWRTLWAYTGPGILMSIAFLDPGNLEADLQAGAYTGYQLIWVLFLATSLGVLMQCLAAKVGVVTGRHMAELCSQEYPRWVSLPLWAMVEVAVIGSDIQEVMGTALALALLFGLPLWVGCVIT 146
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: A0A418EA93_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EA93_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.290e-51 Identity = 86/147 (58.50%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 34 NQGEVNYIPDEPEGKW--------FHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCLLT 450
++GEV +PD+ + ++ F W TL AY GPG+L+ IA++DPGNLE+DLQ GAY GYQL+WVLL A +MG LQ L+ARLGVVTG +LA++C + YPR + +LW M E AI+GSDIQEV+GSAI LQILF +PLW+GCL+T
Sbjct: 46 SRGEVG-VPDDIDSEYNILGFKFAFSWATLWAYAGPGWLMSIAFVDPGNLESDLQAGAYGGYQLIWVLLGATIMGFFLQVLSARLGVVTGKNLAEMCHLMYPRWTSRVLWFMAEVAIVGSDIQEVLGSAIALQILFKLPLWIGCLIT 191
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Match: A0A3M6VN54_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VN54_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.820e-51 Identity = 84/137 (61.31%), Postives = 106/137 (77.37%), Query Frame = 1
Query: 43 EVNYIPDEPEGKWFHWPTLVAYVGPGFLVCIAYLDPGNLEADLQVGAYTGYQLLWVLLLAHVMGLVLQSLAARLGVVTGTHLADVCRMYYPRPIAMMLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWLGCLLTG 453
E+ +EP + F W TL AY GPG+L+ IAY+DPGNLE+DLQ GAY GYQL+WVL A MG LQ LAARLGVVTG +LA++C YPR +++ LW+MTE AI+GSD+QEV+GS+I Q+LFG PLW+GCL+TG
Sbjct: 41 EIKTPDEEPTTRGFSWKTLWAYAGPGWLMSIAYVDPGNLESDLQAGAYAGYQLIWVLFGATAMGFFLQILAARLGVVTGKNLAEMCTAVYPRWVSLALWIMTEIAIVGSDVQEVLGSSIAFQVLFGFPLWIGCLITG 177 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11206.978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11206.978.1 >prot_H-elongata_contig11206.978.1 ID=prot_H-elongata_contig11206.978.1|Name=mRNA_H-elongata_contig11206.978.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp VEDEEEHLHISNQGEVNYIPDEPEGKWFHWPTLVAYVGPGFLVCIAYLDPback to top mRNA from alignment at H-elongata_contig11206:5003..6206+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11206.978.1 ID=mRNA_H-elongata_contig11206.978.1|Name=mRNA_H-elongata_contig11206.978.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1204bp|location=Sequence derived from alignment at H-elongata_contig11206:5003..6206+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11206:5003..6206+ >mRNA_H-elongata_contig11206.978.1 ID=mRNA_H-elongata_contig11206.978.1|Name=mRNA_H-elongata_contig11206.978.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=930bp|location=Sequence derived from alignment at H-elongata_contig11206:5003..6206+ (Himanthalia elongata Himel1 dioecious)back to top |