mRNA_H-elongata_contig1120.975.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: D7FI72_ECTSI (4-hydroxyphenylpyruvate dioxygenase, plastid n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI72_ECTSI) HSP 1 Score: 587 bits (1513), Expect = 1.440e-200 Identity = 322/476 (67.65%), Postives = 360/476 (75.63%), Query Frame = 2
Query: 5 FRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNL---GAG---------LDVSSS--SSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGG-----VGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISF-------GGGD------GSAGGSESWAFLPGFEDVQQQTQREDFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRIPSLTQHQLEGIKDLGLLADED-DEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVV--------EMLQRPGCGGFGLGNFKALFESIEKYESTLAVGAD 1309
FR+KKFHHVEFYCGDA+AAA+RFV GLGM LVAKSDQSTGN QHASYVV+SNDL F+CTAPYSLATT GAG +DV S S LPGFDP AAH FF+RHG+AGRAIGIEVEDA HAY QC+ H G V+ PTRV GRG ISEVRA GDVVLRFISF G GD G GG AFLP F D++ + REDFGLQRADHVV NVWD+++ +++ +TGMHEF+EFAA D+GT++SGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDG GLQH+ALKTNDI +T+RLMRANSGLGGFEFM+ PG YYR VP RIPSLT+ QL +++LGLLAD+D D+GVLLQVFTKPVGDRPTLF EIIQRIGCA +ATD D DR + AD V E+LQR GCGGFGLGNFKALFESIEKYESTLA+G D
Sbjct: 43 FRMKKFHHVEFYCGDATAAASRFVWGLGMKLVAKSDQSTGNAQHASYVVQSNDLRFVCTAPYSLATTPTTEGGAGDRRDPSSRVVDVGESGGSPLPGFDPAAAHEFFRRHGLAGRAIGIEVEDAAHAYEQCIEHCGSDGSNASVRRPTRVTDVDGRGRATISEVRAYGDVVLRFISFEPESKMVGEGDIGGAKGGGDGGRFEGAFLPNFVDIEGEEAREDFGLQRADHVVGNVWDMLEQGEYMTSMTGMHEFAEFAAADVGTVDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMRANSGLGGFEFMEPPGASYYRDVPRRIPSLTEDQLRQLEELGLLADKDEDDGVLLQVFTKPVGDRPTLFFEIIQRIGCAFEATD---GDNEGDRGVFGPADEDERGVRVSSRVEEGELLQRGGCGGFGLGNFKALFESIEKYESTLAIGVD 515
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: A0A835YZ91_9STRA (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ91_9STRA) HSP 1 Score: 476 bits (1224), Expect = 3.320e-158 Identity = 252/445 (56.63%), Postives = 317/445 (71.24%), Query Frame = 2
Query: 2 RFRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNLGAGLD------VSSSSSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGGVGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISFGGGDGSAGGSESWAFLPGFEDVQQ------QTQREDFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRIPSLTQHQLEGIKDLGLLADEDDEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVVEMLQRPGCGGFGLGNFKALFESIEKYESTLAV 1300
RF +K FHH+EFYCGDA A+RF GLGM +VAKSDQSTGN HASYV++S+DL F+ TAPY+ T+L D +S LPGFD + A+ FF+ HGMA RAIGIEVEDA AY QC A+GG GV +PT G G V +SEV A GDVVLRF+S+G G + G AFLPGF+D+ + +G++R DH V NVWD++++V+ L G+TGMH F+EF A D+GT++SGLNS+VLASNNE+VLLPLNEPT+GT +KSQIQT+LEQN G GLQHLALKTNDI+ T+RLM+ S +GGFEF+D+PG YY +P+R+P LT Q+ +++LG+LAD+DD+G+LLQ+FTKP GDRPT F+EIIQRIGC DA +L P G V+M+QR GCGGFG GNF+ALF+SIE YE L V
Sbjct: 25 RFGMKAFHHIEFYCGDAINTASRFSWGLGMPMVAKSDQSTGNPVHASYVLRSHDLTFVFTAPYA---THLAVAADKVQRLSAPPTSPLPGFDADKAYAFFRAHGMAARAIGIEVEDAAAAYEQCTANGGTGVLAPTD----CGNG-VTVSEVAAYGDVVLRFVSYGQGVDAHSG----AFLPGFQDISAPKGAGGEAWPATYGIERVDHAVGNVWDMMEAVERLGGMTGMHRFAEFTAEDVGTVDSGLNSVVLASNNEVVLLPLNEPTYGTKRKSQIQTYLEQNVGPGLQHLALKTNDIIGTLRLMKERSHMGGFEFLDAPGEAYYSDLPARVPELTPQQVSELQELGVLADKDDQGILLQIFTKPCGDRPTFFIEIIQRIGCE-DAVEL----------------PGGQ--VQMVQRGGCGGFGKGNFRALFKSIEDYEKKLGV 438
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: A0A5D6XP53_9STRA (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP53_9STRA) HSP 1 Score: 419 bits (1076), Expect = 2.730e-136 Identity = 229/434 (52.76%), Postives = 289/434 (66.59%), Query Frame = 2
Query: 2 RFRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNLGAGLDVSSSSSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGGVGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISFGGGDGSAGGSESWAFLPGFEDVQQQTQREDFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRIPS-LTQHQLEGIKDLGLLADEDDEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVVEMLQRPGCGGFGLGNFKALFESIEKYESTLAV 1300
RF V+ FHHVEFYCGDA+ + RF GLG++LVAKSDQSTGN + ASYV +SND+ + TAPY+L T D + LPGFD E AH F Q HG+A RA+GI V DA+ AY + + +GGVGV P + +A VISEV+ GDVV+R++S G +LPG+E V G+QR DH V NV LI++V+++ G TG HEFSEF A D+GT++SGLNS+VLASNNEMVLLP+NEPTFGT +KSQIQT+LEQN G GLQH+ALKT+DI +T+ MR S LGGFEFM P YY ++P+RI + L+ Q I++LGLL D+DD+G+LLQ+FTKP+GDRPT+F EII+R+GC LD + E Q GCGGFG GNF LF+SIE+YE TL V
Sbjct: 25 RFDVRNFHHVEFYCGDATNTSKRFQWGLGLNLVAKSDQSTGNHEGASYVTQSNDVKIVFTAPYALETEK-----DPDAKFPLPGFDMEFAHKFTQTHGLAIRALGIAVGDAKEAYEKSVKNGGVGVLEPKTMTDKASGKTAVISEVKLYGDVVIRWVS---------GDFDGPYLPGYEAVAAGPDLS-IGIQRFDHCVGNVPKLIEAVEYVVGFTGFHEFSEFTAEDVGTVDSGLNSMVLASNNEMVLLPVNEPTFGTPRKSQIQTYLEQNVGPGLQHMALKTDDIFRTLAEMRQRSFLGGFEFMPRPEKGYYERLPARIGNDLSPKQYAQIEELGLLVDKDDQGILLQIFTKPLGDRPTVFFEIIERVGCMLDISGRLE------------------------QAAGCGGFGKGNFSELFKSIEEYEKTLNV 419
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: A0A8K0MGH3_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0MGH3_9ROSA) HSP 1 Score: 417 bits (1071), Expect = 3.900e-135 Identity = 228/435 (52.41%), Postives = 296/435 (68.05%), Query Frame = 2
Query: 2 RFRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYS--LATTNLGAGLDVSSSSSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGGVGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISFGGGDG-SAGGSESWAFLPGFEDVQQQTQREDFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRIPS-LTQHQLEGIKDLGLLADEDDEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVVEMLQRPGCGGFGLGNFKALFESIEKYESTL 1294
RF+VK+FHHVEF+CGDA+ A RF GLGM L+AKSD STGN HASY+++S DLCF+ TAPYS +A + G + +S+S+P FD H F HG+A RAI +EVEDAE A+ +AHG SP ++ R VV++EV+ GDVVLR++S+ S E+W FLPGFE V DFG++R DH V NV +L +V ++ G TG HEF+EF A D+GT ESGLNS+VLA+N+EMVLLP+NEP +GT +KSQIQT+LE N+GAGLQHLAL + DI +T+R MR+ SG+GGFEFM SP P YY+ + +R LT+ Q++ ++LG+L D DD+G LLQ+FTKPVGDRPT+F+EIIQR+GC L D G ++ Q+ GCGGFG GNF LF+SIE+YE TL
Sbjct: 32 RFKVKRFHHVEFWCGDATNTARRFSWGLGMPLIAKSDLSTGNQAHASYLLRSGDLCFLFTAPYSPSIAASQTPNG-PIINSASIPTFDHSVFHAFSASHGLAVRAIAVEVEDAELAFNTSLAHGAKPSASPLLLDNR-----VVLAEVQLYGDVVLRYVSYKDPTNVSDPNPENW-FLPGFESVPASFPL-DFGIRRLDHAVGNVSELGPAVAYVKGFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVYGTKRKSQIQTYLEHNEGAGLQHLALVSEDIFRTLREMRSRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTEEQIKECEELGILVDRDDQGTLLQIFTKPVGDRPTIFVEIIQRVGCML-------------------KDEEG----KVYQKGGCGGFGKGNFSELFKSIEEYEKTL 435
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: K3WDR9_GLOUD (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDR9_GLOUD) HSP 1 Score: 412 bits (1059), Expect = 1.050e-133 Identity = 223/434 (51.38%), Postives = 287/434 (66.13%), Query Frame = 2
Query: 2 RFRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNLGAGLDVSSSSSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGGVGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISFGGGDGSAGGSESWAFLPGFEDVQQQTQREDFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRI-PSLTQHQLEGIKDLGLLADEDDEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVVEMLQRPGCGGFGLGNFKALFESIEKYESTLAV 1300
+F V+KFHHVEFYCGDA+ RF GLG++ + KSDQSTGN + ASYVV+S D+ + TAPY+L T S S LPGFD + AH F Q+HG+A RA+GI+V DA+ AY + +G VGV P + + V+SEV+ GDVV+R++S G F+PG+E+V+ G+ R DH V NV LI++V+++ G TG HEFSEF A D+GT++SGLNS+VL+SNNEMVL+P+NEPTFGT +KSQIQT+LEQN G GLQH+ALKTNDI +T+ MR S LGGFEFM P YY ++P+RI SLT+ Q + I++LGLL D+DD+GVLLQ+FTKP+GDRPT+F EII+R+GC D E Q GCGGFG GNF LF+SIE+YE TL V
Sbjct: 28 KFDVQKFHHVEFYCGDATNTFKRFQWGLGLNYIGKSDQSTGNHEAASYVVQSGDVKLVFTAPYALETEKAA-----DSKSPLPGFDMKFAHEFTQKHGLAVRALGIKVADAKEAYEISVKNGAVGVLEPKALTDKVSGKSTVMSEVKLYGDVVIRWMS---------GDFDGPFVPGYEEVESGPDLS-IGIDRFDHCVGNVPKLIEAVEYVMGFTGFHEFSEFTAEDVGTVDSGLNSMVLSSNNEMVLIPVNEPTFGTKRKSQIQTYLEQNVGPGLQHMALKTNDIFRTLGEMRKRSYLGGFEFMPRPEKGYYERLPARIGDSLTEKQYKQIEELGLLVDKDDQGVLLQIFTKPLGDRPTVFFEIIERVGCMADIAGRLE------------------------QAAGCGGFGKGNFSELFKSIEEYEKTLNV 422
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: A0A2P5BTK6_PARAD (4-hydroxyphenylpyruvate dioxygenase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5BTK6_PARAD) HSP 1 Score: 411 bits (1057), Expect = 3.580e-133 Identity = 222/432 (51.39%), Postives = 291/432 (67.36%), Query Frame = 2
Query: 2 RFRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNLGAGLDVSSSSSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGGVGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISFGGGDGSAGGSESWAFLPGFEDVQQQTQREDFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRIPS-LTQHQLEGIKDLGLLADEDDEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVVEMLQRPGCGGFGLGNFKALFESIEKYESTL 1294
RF VK+FHHVEF+CGDA+ A RF GLGM LVAKSD STGN HASY+++S L F+ TAPYS ++ A SSS+++P FD + F HG+A RAI +EV+DA A+A +AHG P + RA +++EVR GDVVLR++S+ D ESW FLPGFE V + DFG++R DH V NV +L +V ++ G TG HEF+EF A D+GT ESGLNS+VL++N+E VL+P+NEP FGT +KSQIQT+LE N+GAG+QHLAL + DI +T+R MR+ +GLGGFEFM SP P YY+ + +R LT+ Q++ ++LG+L D DD+G LLQ+FTKP+GDRPT+F+EIIQR+GC L +DD E+ Q+ GCGGFG GNF LF+SIE+YE TL
Sbjct: 35 RFGVKRFHHVEFWCGDATNTARRFSWGLGMPLVAKSDLSTGNLVHASYLLRSGHLLFLFTAPYS---PSIAADPPSSSSAAIPTFDRASFLSFSAAHGLAVRAIAVEVDDAALAFATSLAHGARPSSPPVTLGNRA-----IVAEVRLYGDVVLRYVSYPNQDLGKPDQESW-FLPGFEPVASEPL--DFGIRRLDHAVGNVAELGPAVSYVKGFTGFHEFAEFTAEDVGTSESGLNSVVLSNNDETVLIPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALASEDIFRTLREMRSRTGLGGFEFMPSPPPTYYKNLKNRAGDVLTEEQIKECEELGILVDRDDQGTLLQIFTKPLGDRPTIFIEIIQRVGCML------KDDKG-----------------ELYQKGGCGGFGKGNFSELFKSIEEYEKTL 432
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: A0A835XEL1_9CHLO (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XEL1_9CHLO) HSP 1 Score: 410 bits (1055), Expect = 6.030e-133 Identity = 224/434 (51.61%), Postives = 285/434 (65.67%), Query Frame = 2
Query: 2 RFRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNLGAGLDVSSSSSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGGVGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISFGGGDGSAGGSESWAFLPGFEDVQQQTQREDFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRIPS-LTQHQLEGIKDLGLLADEDDEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVVEMLQRPGCGGFGLGNFKALFESIEKYESTLAV 1300
RF V KFHH++F+C DA+ RF GLGMSLVAKSDQST NT +ASYV+KSNDL F TAPYS L G + L + + A+ F HG+A R++GI V+ A+ AY +AHGG GV+ PT + A +SEV GDVVLRF+S G +L G+E + + + FG++R DH V N DLIK+V+++ G TG HEF+EF A D+GT++SGLNS+VLASNNE VLLP+NEPTFGT +KSQIQT+LEQN+G GLQHLAL T+DI T+R MR S +GGFEFM P +YYR +P +I LT Q + ++LG+L D+DD+GVLLQ+FTKP+GDRPT+F+EIIQR+GC M + +PA +VV Q GCGGFG GNF LF+SIE YE TL V
Sbjct: 33 RFTVHKFHHIDFWCADATNTFKRFQHGLGMSLVAKSDQSTNNTLYASYVLKSNDLVFSFTAPYSKKAAALSEG------TPLRDYSLDQAYDFVNTHGLAVRSVGILVDCAKAAYEASVAHGGKGVRPPTELKDAATGTSQTVSEVSLYGDVVLRFVS---------GDFKGPYLAGYEALPE-IAAQSFGIRRVDHAVGNTHDLIKAVEYVIGFTGFHEFAEFVAEDVGTVDSGLNSMVLASNNEAVLLPINEPTFGTPRKSQIQTYLEQNEGPGLQHLALMTDDIFHTLREMRKRSDVGGFEFMPKPSDKYYRNLPKKIGDVLTPEQYKECEELGILVDKDDQGVLLQIFTKPLGDRPTIFIEIIQRVGC-----------------MREVREPATNAVVGTEQAAGCGGFGKGNFSELFKSIEDYERTLNV 433
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: A0A4S4EPU4_CAMSI (4-hydroxyphenylpyruvate dioxygenase n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4EPU4_CAMSI) HSP 1 Score: 410 bits (1055), Expect = 1.170e-132 Identity = 225/435 (51.72%), Postives = 292/435 (67.13%), Query Frame = 2
Query: 2 RFRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNLGAGLDVSSSSSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGGVGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISFGGGDGSAGGS--ESWAFLPGFEDVQQQTQRE-DFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRIPS-LTQHQLEGIKDLGLLADEDDEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVVEMLQRPGCGGFGLGNFKALFESIEKYESTL 1294
RF VK+FHHVEF+C DA+ A RF GLGM +VAKSD STGN HASY+++S LCF+ TAPYS + A + +S+++P F+ A F HG+A R+I IEVEDAE A++ +AHG P ++ RA VI+EV+ GDVVLR+IS+ + S +SW FLPGFE + + + DFG++R DH V NV +L ++++ G TG HEF+EF A D+GT ESGLNS+VLASNNEMVLLP+NEP FGT +KSQIQT+LE N+GAGLQHLAL + DI +T+R MR SG+GGFEFM SP P YYR + R+ L+ Q++ ++LG+L D DD+G LLQ+FTKPVGDRPT+F+EIIQR+GC L +D+ V Q+ GCGGFG GNF LF+SIE+YE TL
Sbjct: 40 RFAVKRFHHVEFWCTDATNVARRFSWGLGMPIVAKSDLSTGNLSHASYLLRSGHLCFLFTAPYSPSI----AAAENLTSAAIPTFNSSACRSFSAAHGLAVRSIAIEVEDAELAFSASVAHGAKPSSPPINLDDRA-----VIAEVQLYGDVVLRYISYKNPNPPENTSHPDSW-FLPGFESMDEGSVFPVDFGIRRLDHAVGNVPELAPMIEYVKGFTGFHEFAEFTAEDVGTSESGLNSMVLASNNEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGLQHLALVSEDIFRTLREMRRRSGVGGFEFMPSPPPTYYRNLKKRVGDVLSDEQIKEAEELGILVDRDDQGTLLQIFTKPVGDRPTIFIEIIQRVGCML-----KDDEGKV------------------YQKGGCGGFGKGNFSELFKSIEEYEKTL 441
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: Q70ZL8_CHLRE (4-hydroxyphenylpyruvate dioxygenase (Fragment) n=6 Tax=Chlamydomonas TaxID=3052 RepID=Q70ZL8_CHLRE) HSP 1 Score: 409 bits (1051), Expect = 2.310e-132 Identity = 225/434 (51.84%), Postives = 285/434 (65.67%), Query Frame = 2
Query: 2 RFRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNLGAGLDVSSSSSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGGVGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISFGGGDGSAGGSESWAFLPGFEDVQQQTQREDFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRI-PSLTQHQLEGIKDLGLLADEDDEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVVEMLQRPGCGGFGLGNFKALFESIEKYESTLAV 1300
+F V KFHH++F+CGDA+ + RF GLGM LVAKSDQST N ASYV++SNDL F TAPYS ++ G+ + ++ + A+ F HG+A RA+G+ V+DA+ AY +AHG GV P + A VISEV G+VVLR++S GS FL G+ V FGLQR DH V N DLIK+V+++ G TG HEFSEF A D+GT++SGLNS+VLASNNE VLLP+NEPTFGT +KSQIQT+LEQN+G GLQHLAL +NDI T+R MRA S LGGFEFM +YY+ + +RI SLT Q +++LG+L D+DD+GVLLQ+FTKP+GDRPT+F+EIIQR+GC M + +PA +VV Q GCGGFG GNF ALF+SIE YE TL V
Sbjct: 32 KFTVHKFHHIDFWCGDATNTSKRFSYGLGMPLVAKSDQSTNNQLFASYVLRSNDLVFTFTAPYSRKCASVSEGVPLRH------YNIDHAYEFINSHGLAVRAVGLLVDDAKTAYEVSVAHGAKGVLPPVELRDEASGTSQVISEVLLYGEVVLRYVS---------GSFQGPFLAGYTPVTDSAVTS-FGLQRLDHAVGNTHDLIKAVEYITGFTGFHEFSEFVAEDVGTVDSGLNSMVLASNNEAVLLPVNEPTFGTPRKSQIQTYLEQNEGPGLQHLALLSNDIFTTLREMRARSELGGFEFMPRANAKYYKDMYARIGDSLTPQQYREVEELGILVDKDDQGVLLQIFTKPLGDRPTVFIEIIQRVGC-----------------MREVKEPATGAVVGTEQAAGCGGFGKGNFGALFKSIEDYERTLNV 432
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Match: A0A6P3ZN51_ZIZJJ (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZN51_ZIZJJ) HSP 1 Score: 412 bits (1059), Expect = 2.700e-132 Identity = 225/433 (51.96%), Postives = 290/433 (66.97%), Query Frame = 2
Query: 2 RFRVKKFHHVEFYCGDASAAAARFVCGLGMSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNLGAGLDVSSSSSLPGFDPEAAHLFFQRHGMAGRAIGIEVEDAEHAYAQCMAHGGVGVQSPTRVNGRAGRGEVVISEVRAVGDVVLRFISFGGGDG-SAGGSESWAFLPGFEDVQQQTQREDFGLQRADHVVMNVWDLIKSVDHLAGITGMHEFSEFAAVDIGTIESGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGAGLQHLALKTNDILKTVRLMRANSGLGGFEFMDSPGPEYYRKVPSRIPS-LTQHQLEGIKDLGLLADEDDEGVLLQVFTKPVGDRPTLFLEIIQRIGCALDATDLAEDDATVDRIMVDSADPAGASVVEMLQRPGCGGFGLGNFKALFESIEKYESTL 1294
RF+VK+FHH+E++CGDA+ A RF GLGM LVAKSD STGN HASY+++S DLCF+ TAPYS + +L +S+S+P FD A F HG+A RA+ IEVEDAE A+ +AHG P ++ R V I+EV+ GDVVLR++S+ S +SW FLPGFE V DFG++R DH V NV +L +V ++ G TG HEF+EF A D+GT +SGLNS+VLA+N+EMVLLPLNEP FGT +KSQIQT+LE N+GAGLQHLAL + DI +T+R MR+ S +GGFEFM SP P YY+ + +R LT Q++ ++LG+L D DD+G LLQ+FTKPVGDRPT+F+EIIQR+GC L D G ++ Q+ GCGGFG GNF LF+SIE+YE TL
Sbjct: 111 RFKVKRFHHIEYWCGDATNTARRFSWGLGMPLVAKSDLSTGNQVHASYLLRSGDLCFLFTAPYSPSIASLSQS---PNSASIPSFDHSACRRFADSHGLAVRAVAIEVEDAELAFTTSVAHGAKPSSPPLSLDDR-----VAIAEVQLYGDVVLRYVSYKDPTRISDPNPDSW-FLPGFESVPSSFPL-DFGIRRLDHAVGNVPELGPAVSYVKGFTGFHEFAEFTAEDVGTSDSGLNSVVLANNDEMVLLPLNEPVFGTKRKSQIQTYLEHNEGAGLQHLALVSEDIFRTLREMRSRSWIGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKECEELGILVDRDDQGTLLQIFTKPVGDRPTIFIEIIQRVGCML-------------------KDEEG----KVYQKGGCGGFGKGNFSELFKSIEEYEKTL 510 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1120.975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1120.975.1 >prot_H-elongata_contig1120.975.1 ID=prot_H-elongata_contig1120.975.1|Name=mRNA_H-elongata_contig1120.975.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=409bp MSLVAKSDQSTGNTQHASYVVKSNDLCFMCTAPYSLATTNLGAGLDVSSSback to top mRNA from alignment at H-elongata_contig1120:3824..9978- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1120.975.1 ID=mRNA_H-elongata_contig1120.975.1|Name=mRNA_H-elongata_contig1120.975.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6155bp|location=Sequence derived from alignment at H-elongata_contig1120:3824..9978- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1120:3824..9978- >mRNA_H-elongata_contig1120.975.1 ID=mRNA_H-elongata_contig1120.975.1|Name=mRNA_H-elongata_contig1120.975.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2454bp|location=Sequence derived from alignment at H-elongata_contig1120:3824..9978- (Himanthalia elongata Himel1 dioecious)back to top |