prot_H-elongata_contig111946.973.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig111946.973.1
Unique Nameprot_H-elongata_contig111946.973.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length208
Homology
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: A0A6H5KQK5_9PHAE (PSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQK5_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 6.920e-96
Identity = 175/216 (81.02%), Postives = 185/216 (85.65%), Query Frame = 0
Query:    1 QQALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDKSHWGDLAESDEXXXXXXXXXXXXXXXGG--AETPMFEGG-VSSVSGLETPDTMMDLRKRAXXXXXXTTGMSTVPQELYKVVPQKESAVGAGALFGGDRKYVLPGAKGVGGPV----GDVSEVP-MDVQVSLN 208
            ++ALGIGEDDPPPWLINMQRYGPP+SYPHLRIPGLNAPIP+GARYGFG SEWGKPPVDSKG+ LYGDVFNL AK GDDVEEMDKSHWGDLAESD XXXXXXXXXXXXXXX    AETPMFEGG VSSVSGLETPDTMMDLRKRA      TTG+S VPQELYKVV  ++SAVGAGALFGGDRKYVLPG+K  GG      GD +E P  DVQVSLN
Sbjct:  379 REALGIGEDDPPPWLINMQRYGPPLSYPHLRIPGLNAPIPAGARYGFGSSEWGKPPVDSKGNPLYGDVFNLAAKDGDDVEEMDKSHWGDLAESDXXXXXXXXXXXXXXXXXXXXAETPMFEGGGVSSVSGLETPDTMMDLRKRAGVDTPDTTGLSAVPQELYKVVQARDSAVGAGALFGGDRKYVLPGSKAGGGGAAGLGGDATEAPPRDVQVSLN 594          
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: A0A7S2HBQ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HBQ5_9STRA)

HSP 1 Score: 181 bits (460), Expect = 7.490e-53
Identity = 121/211 (57.35%), Postives = 150/211 (71.09%), Query Frame = 0
Query:    3 ALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDKSHWGDLAESDEXXXXXXXXXXXXXXX----GGAETPMFEGGVSSV-SGLETPDTMMDLRKRAXXXXXXTTGMSTVPQELYKVVPQKESAVGAGALFGGDRKYVLPGAKGVGGPVGDVSEVPMDVQVSLN 208
            ALG+ E+ PPPWLINMQRYGPP SYP+L+IPGLNAPIP G+++G+ P  WGKPPVD  G  LYGDVF     A  D +++D++ WGDL  SDEXXXXXXXXXXXXXXX     G ETP  E G+SSV SGL+TP+++ DLRKRA      T+G+++ P+ELY+VV +K+  VGAG LFG D+KY +P            SE   DVQV+LN
Sbjct:   72 ALGMPENAPPPWLINMQRYGPPPSYPNLKIPGLNAPIPEGSQFGYHPGGWGKPPVDEMGRPLYGDVFGQADPAAHDEQQVDRALWGDLG-SDEXXXXXXXXXXXXXXXTTDVSGLETPSTEAGISSVTSGLDTPESI-DLRKRAGTDTPDTSGIASAPKELYQVVQEKQVRVGAG-LFGTDKKYSMP------------SE---DVQVALN 264          
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: A0A7S2MJ71_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MJ71_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.070e-50
Identity = 121/211 (57.35%), Postives = 150/211 (71.09%), Query Frame = 0
Query:    3 ALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDKSHWGDLAESDEXXXXXXXXXXXXXXX----GGAETPMFEGGVSSV-SGLETPDTMMDLRKRAXXXXXXTTGMSTVPQELYKVVPQKESAVGAGALFGGDRKYVLPGAKGVGGPVGDVSEVPMDVQVSLN 208
            ALG+ E+ PPPWLINMQRYGPP SYP+L+IPGLNAPIP G+++G+ P  WGKPPVD  G  LYGDVF     A  D +++D++ WGDL  SDEXXXXXXXXXXXXXXX     G ETP  E G+SSV SGL+TP+++ DLRKRA      T+G+++ P+ELY+VV +K+  VGAG LFG D+KY +P            SE   DVQV+LN
Sbjct:  307 ALGMPENAPPPWLINMQRYGPPPSYPNLKIPGLNAPIPEGSQFGYHPGGWGKPPVDEMGRPLYGDVFGQADPAAHDEQQVDRALWGDLG-SDEXXXXXXXXXXXXXXXTTDVSGLETPSTEAGISSVTSGLDTPESI-DLRKRAGTDTPDTSGIASAPKELYQVVQEKQVRVGAG-LFGTDKKYSMP------------SE---DVQVALN 499          
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: A0A7S2W121_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W121_9STRA)

HSP 1 Score: 179 bits (453), Expect = 6.510e-50
Identity = 109/191 (57.07%), Postives = 135/191 (70.68%), Query Frame = 0
Query:    1 QQALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDKSHWGDLAESDEXXXXXXXXXXXXXXX------GGAETPMFEGGVSSV-SGLETPDTMMDLRKRAXXXXXXTTGMSTVPQELYKVVPQKESAVGAGALFGGDRKYVLP 184
            + ALG+ E+ PPPWLINMQRYGPP +YP+L+IPGLNAPIP GA +G+ P  WGKPPVD     LYGDVF        D   +D+S WG+L   DE  XXXXXXXXXXXXX       G +TP  E G+SSV SGLETP++++DLRKRA      T+G+ + P+ELY+VV +K + VGAG +FG D+KYVLP
Sbjct:  280 KHALGMPENAPPPWLINMQRYGPPPAYPNLKIPGLNAPIPEGASFGYHPGGWGKPPVDEYNRPLYGDVFGRAEPEAADQVLVDRSLWGELGSEDEESXXXXXXXXXXXXXXXXDDMSGLDTPSTEAGMSSVVSGLETPESVVDLRKRAGTDTPDTSGILSAPKELYQVVQEKSAKVGAG-VFGTDKKYVLP 469          
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: A0A836CFT2_9STRA (Proline-rich spliceosome-associated family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT2_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.920e-44
Identity = 105/189 (55.56%), Postives = 129/189 (68.25%), Query Frame = 0
Query:    3 ALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDKSHWGDLAESDEXXXXXXXXXXXXXXXGGA-----ETPMFEGGVSSVSGLETPDTMMDLRKRAXXXXXXTTGMSTVPQELYKVVPQKESAVGAGALFGGDRKYVLPGA 186
            ALG+ +  PPPWLINMQRYGPP SYPHLRIPGL+APIP GA +G+ P  WGKPPV+  G  LYGDVF  +    ++   +D+SHWG++AE   XXXXXXXXXXXXX   GA      TPM EG  SS++GLETPD ++DLRKR           +  P+ELY VV +  + VG GALFG D++Y + GA
Sbjct:  306 ALGMPDGAPPPWLINMQRYGPPPSYPHLRIPGLSAPIPPGASFGYHPGGWGKPPVNEAGVPLYGDVFGTMG-VEEEAAAIDRSHWGEMAEXXXXXXXXXXXXXXXXGGAGALTEAPPTPM-EGTESSMTGLETPDALLDLRKRGLETPSDIG--TPAPRELYTVVGETSAGVG-GALFGADKRYAVGGA 489          
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: A0A812UK03_SYMMI (SF3B2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK03_SYMMI)

HSP 1 Score: 157 bits (397), Expect = 4.120e-43
Identity = 112/201 (55.72%), Postives = 129/201 (64.18%), Query Frame = 0
Query:    3 ALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDV-EEMDKSHWGDL-AESDEXXXXXXXXXXXXXXX-----------------GGAETPMFEGGVSSV-SGLETPDTMMDLRKRAXXXXXXTTGMSTVPQELYKVVPQKESAVGAGALFGGDRKYVL 183
            ALG+ E+ PPPWLINMQRYGPP SYP LRIPGLNAPIP GA YG+ P  WGKPPVD  G  LYGDVF   A+    V E +D+SHWG+L A S E XXXXXXXXXXXXXX                  G ETP+   G+SSV SGLETPDT+ DLRKR         G     +ELYKV+ ++++   +G  FG DR YVL
Sbjct:  100 ALGMLENAPPPWLINMQRYGPPPSYPSLRIPGLNAPIPEGASYGYHPGGWGKPPVDEYGRPLYGDVFGTYAQEDHAVLESIDRSHWGELGAASSESXXXXXXXXXXXXXXXXXXXXXRREYGGEADSSGIETPLSLDGMSSVVSGLETPDTI-DLRKREGVETPDPGGH----RELYKVIQERKTQGNSGQFFGSDRGYVL 295          
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: A0A7R9Z112_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9Z112_9CHLO)

HSP 1 Score: 161 bits (407), Expect = 9.610e-43
Identity = 106/230 (46.09%), Postives = 139/230 (60.43%), Query Frame = 0
Query:    1 QQALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDK-SHWGDLAESDEXXXXXXXXXXXXXXXGGAETPMFEGGVSSV-----------SGLETPDTMMDLRKRAXXXXXXTTGMSTVPQELYKVVPQKESAVGAGALFGGDRKYVLPGAKGVGGP-----------VGDVSEVPMDVQVSL 207
            ++ALG+GE+ PPPWLINMQRYGPP SYP L+IPGLNAPIP G  +G+ P  WGKPPVD  G+A+YGDVF       D  E++DK S WG+L   +E  XXXXXXXXXXXXX    T                     SG+ETPDTM++LRK +          S  P++LY+V+ QK+++VGAG + G D  YV+PG+    G            +G ++ +P DV V++
Sbjct:  345 REALGMGENTPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGCSFGYQPGGWGKPPVDEAGNAVYGDVFGQHVDEVDSDEDVDKASKWGELDADEEEEXXXXXXXXXXXXXXXXGTAXXXXXXXXXXXXXXXXXXXXSGIETPDTMLNLRKASD---------SEQPKQLYQVLEQKQASVGAGTILGTDHVYVIPGSSAADGADGAKKAAAAKKLGVLANMPTDVDVAI 565          
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: A0A061RQR5_9CHLO (Splicing factor 3b subunit 2-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RQR5_9CHLO)

HSP 1 Score: 151 bits (382), Expect = 6.140e-41
Identity = 106/195 (54.36%), Postives = 125/195 (64.10%), Query Frame = 0
Query:    3 ALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDKS-HWGDLAESDEXXXXXXXXXXXXXXXGGAETPMFEGGVSSVS--------GLETPDTMMDLRKRAXXXXXXTTGMSTVPQE----LYKVVPQKESAVGAGALFGGDRKYVLP 184
            ALG+ ED PPPWLINMQRYGPP SYP LR+PGLNAPIP GA +G+ P  WGKPPVD  G+ +YGDVF ++AK     + +DK  HWGDL ES+E XXXXXXXXXXXXXX   +T     G  SV         G+ETPDT+  LRK          G  +V  E    LY V+ QK ++VG GAL G D  YV+P
Sbjct:   81 ALGMSEDGPPPWLINMQRYGPPPSYPALRVPGLNAPIPEGASFGYHPGGWGKPPVDEYGNPIYGDVFGVMAKPPSASDYVDKDKHWGDL-ESEEEXXXXXXXXXXXXXXXXXDTEALADGYRSVDTDISSLPHGMETPDTIQ-LRK----------GFESVESEQQRPLYTVLEQKAASVG-GALMGSDHTYVMP 262          
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: K3X053_GLOUD (PSP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X053_GLOUD)

HSP 1 Score: 155 bits (392), Expect = 6.720e-41
Identity = 101/210 (48.10%), Postives = 133/210 (63.33%), Query Frame = 0
Query:    1 QQALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDKSHWGDLAESDEXXXXXXXXXXXXXXXG------------GAETPMFEGGVSSVSGLETPDTMMDLRKRAXXXXXXTTGMSTVPQELYKVVPQKESAVGAGALFGGDRKYVLPGAKGVGGPVGDVSE 198
            ++ALG+ +  PPPWL+NMQRYGPP +YP+L+IPGLNAPIP  A +G+ P  WGKPPVD  G  LYGDVF   ++     E +++  WG+L E +EXXXXXXXXXXXXXX              G ETP+ +G  S  SGL TP  ++D+RK         T    VPQ+LY V+ QKE++VG+ +L+G   +YV+PGA G     G  +E
Sbjct:  308 KKALGMVDGVPPPWLLNMQRYGPPPAYPNLKIPGLNAPIPEAASFGYHPGGWGKPPVDENGQPLYGDVFGKTSEEEPSGEPINRERWGELEEVEEXXXXXXXXXXXXXXGDMSALHAAGLDATGMETPLVDGISSIASGLSTPGGIVDMRKGIRG-----TETPDVPQQLYTVLEQKETSVGS-SLYGSGHEYVVPGAAGASSTDGTRTE 511          
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Match: A0A2D4BKN2_PYTIN (PSP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKN2_PYTIN)

HSP 1 Score: 154 bits (389), Expect = 1.680e-40
Identity = 106/207 (51.21%), Postives = 132/207 (63.77%), Query Frame = 0
Query:    1 QQALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPSEWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDKSHWGDL-----AESDEXXXXXXXXXXXXXXXG-------GAETPMFEG--GVSSV-SGLETPDTMMDLRKRAXXXXXXTTGMST--VPQELYKVVPQKESAVGAGALFGGDRKYVLPGAKGVG 190
            +QALG+ E  PPPWL+NMQRYGPP +YP+L+IPGLNAPIP GA +G+ P  WGKPPVD  G  LYGDVF+      +  EE+++  WG+L     AE + XXXXXXXXXXX    G       G  TP+ +G   VSS+ SGL TP  ++D+RK        T G  T  VPQ+LY V+ Q+ES+VG  AL+G    YVLPGA   G
Sbjct:  307 KQALGMVEGVPPPWLLNMQRYGPPPAYPNLKIPGLNAPIPEGASFGYHPGGWGKPPVDENGRPLYGDVFSKSTP--ETTEEVNRERWGELEKVPEAEEEXXXXXXXXXXXXDYATGQVGVDATGIATPLVDGISSVSSIASGLTTPGGVIDMRK-------GTRGTETPDVPQQLYTVLEQRESSVGT-ALYGSGHGYVLPGASAAG 503          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111946.973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQK5_9PHAE6.920e-9681.02PSP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2HBQ5_9STRA7.490e-5357.35Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2MJ71_9STRA1.070e-5057.35Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2W121_9STRA6.510e-5057.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CFT2_9STRA1.920e-4455.56Proline-rich spliceosome-associated family protein... [more]
A0A812UK03_SYMMI4.120e-4355.72SF3B2 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7R9Z112_9CHLO9.610e-4346.09Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A061RQR5_9CHLO6.140e-4154.36Splicing factor 3b subunit 2-like n=1 Tax=Tetrasel... [more]
K3X053_GLOUD6.720e-4148.10PSP domain-containing protein n=1 Tax=Globisporang... [more]
A0A2D4BKN2_PYTIN1.680e-4051.21PSP domain-containing protein n=1 Tax=Pythium insi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006568PSP, proline-richSMARTSM00581testneucoord: 1..41
e-value: 2.7E-10
score: 50.2
IPR006568PSP, proline-richPFAMPF04046PSPcoord: 1..37
e-value: 1.3E-14
score: 53.7
NoneNo IPR availablePANTHERPTHR12785splicing factor 3Bcoord: 2..191
NoneNo IPR availablePANTHERPTHR12785:SF6SPLICING FACTOR 3B SUBUNIT 2coord: 2..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111946contigH-elongata_contig111946:3..1133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111946.973.1mRNA_H-elongata_contig111946.973.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig111946 3..1133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig111946.973.1 ID=prot_H-elongata_contig111946.973.1|Name=mRNA_H-elongata_contig111946.973.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=208bp
QQALGIGEDDPPPWLINMQRYGPPISYPHLRIPGLNAPIPSGARYGFGPS
EWGKPPVDSKGDALYGDVFNLLAKAGDDVEEMDKSHWGDLAESDEEEEEE
EEDEDRDGEGGGAETPMFEGGVSSVSGLETPDTMMDLRKRAGVDTPDTTG
MSTVPQELYKVVPQKESAVGAGALFGGDRKYVLPGAKGVGGPVGDVSEVP
MDVQVSLN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006568PSP_pro-rich