prot_H-elongata_contig111933.972.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig111933.972.1
Unique Nameprot_H-elongata_contig111933.972.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
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BLAST of mRNA_H-elongata_contig111933.972.1 vs. uniprot
Match: D7FUR5_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR5_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 9.280e-28
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0 
Query:    5 WESQEGAHTPSGSKTPIMICGWLYKMKRKKRKFRSTWNRRWFTVEDGALHWYKTS 59
            WESQEGAHTPSGSKTPI+ICGWL KMKR+ RKFRSTWNRRWFTVEDGA +WYKTS
Sbjct:   16 WESQEGAHTPSGSKTPIIICGWLLKMKREHRKFRSTWNRRWFTVEDGAFNWYKTS 70
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BLAST of mRNA_H-elongata_contig111933.972.1 vs. uniprot
Match: A0A835ZH79_9STRA (PH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH79_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.910e-14
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 0 
Query:   20 PIMICGWLYKMKRKKRKFRSTWNRRWFTVEDGALHWY 56
            PI +CGWL+KMKR +RKFRSTW RRWFTV+DG L WY
Sbjct:    1 PIYLCGWLHKMKRTQRKFRSTWARRWFTVQDGCLLWY 37
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BLAST of mRNA_H-elongata_contig111933.972.1 vs. uniprot
Match: A0A7S2HE46_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HE46_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.740e-10
Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 0 
Query:   19 TPIMICGWLYKMKRKKRKFRSTWNRRWFTVEDGALHWYKTSR 60
            +PI++ GWL K+KR +R F STWNRRWFT++DG L+WY   R
Sbjct:    8 SPIVMRGWLLKLKRNQRLFMSTWNRRWFTIQDGRLNWYSGKR 49
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111933.972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUR5_ECTSI9.280e-2889.09PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A835ZH79_9STRA7.910e-1475.68PH domain-containing protein (Fragment) n=1 Tax=Tr... [more]
A0A7S2HE46_9STRA1.740e-1059.52Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 5..60
e-value: 3.3E-9
score: 38.6
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 20..60
score: 8.92
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 18..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111933contigH-elongata_contig111933:1638..1820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111933.972.1mRNA_H-elongata_contig111933.972.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig111933 1638..1820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig111933.972.1 ID=prot_H-elongata_contig111933.972.1|Name=mRNA_H-elongata_contig111933.972.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MLRPWESQEGAHTPSGSKTPIMICGWLYKMKRKKRKFRSTWNRRWFTVED
GALHWYKTSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR001849PH_domain