mRNA_H-elongata_contig111924.971.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A6H5J671_9PHAE (Adenylosuccinate lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J671_9PHAE) HSP 1 Score: 210 bits (535), Expect = 3.640e-63 Identity = 101/121 (83.47%), Postives = 114/121 (94.21%), Query Frame = 1
Query: 1 QMYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHG-KLESLVDPNLFIGRSPKQV 360
+MYLPEGFL+ADV+ TLL+NIADG+HVWPG+VR RVM+ELPFMATENILM CV+AGGDRQDLHEKIRVHSMAAGMAVKGEGK NDL++RVA DPAFEAVHG KL SL+DP+LFIGRSP+QV
Sbjct: 420 RMYLPEGFLSADVIVTLLTNIADGMHVWPGVVRARVMSELPFMATENILMACVQAGGDRQDLHEKIRVHSMAAGMAVKGEGKPNDLMDRVAGDPAFEAVHGDKLASLIDPSLFIGRSPEQV 540
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A7S1VIS6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIS6_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.750e-57 Identity = 87/117 (74.36%), Postives = 99/117 (84.62%), Query Frame = 1
Query: 10 LPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHGKLESLVDPNLFIGRSPKQV 360
LPEGFLA DV+ LLSNIA+GLHVWP +VR VMAELPFMATENILMECVKAGGDRQDLHEKIRVHSM AG VK EGK NDLLER+ KD AF VH +L+ ++DP+ F+GR+P+QV
Sbjct: 2 LPEGFLATDVVLNLLSNIANGLHVWPQVVRAHVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMEAGKVVKSEGKPNDLLERLKKDEAFGVVHNQLDDMMDPSKFVGRAPEQV 118
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A835YZX3_9STRA (Adenylosuccinate lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX3_9STRA) HSP 1 Score: 192 bits (488), Expect = 7.050e-57 Identity = 89/120 (74.17%), Postives = 105/120 (87.50%), Query Frame = 1
Query: 1 QMYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHGKLESLVDPNLFIGRSPKQV 360
++ LPE FLA DV+ TLL NIADG+HVWP ++R RVM+ELPFMATENILM CV+AGGDRQ+LHE IRVHSMAAGM VKGEGKANDLLER+ DPAF+AVH +++SL+DP LFIGR P+QV
Sbjct: 345 RIILPEAFLATDVIVTLLHNIADGMHVWPQVIRARVMSELPFMATENILMACVQAGGDRQELHELIRVHSMAAGMVVKGEGKANDLLERIKADPAFKAVHDRIDSLIDPQLFIGRCPEQV 464
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A1E7FRN2_9STRA (Adenylosuccinate lyase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRN2_9STRA) HSP 1 Score: 191 bits (486), Expect = 7.080e-57 Identity = 90/120 (75.00%), Postives = 106/120 (88.33%), Query Frame = 1
Query: 1 QMYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHGKLESLVDPNLFIGRSPKQV 360
++ LPEGFLA DV+ TLLSNIADGLHVWP +V++ VMAELPFM+TE ILMECVKAGGDRQ+LHE IRVHSMAAG VKGEGK NDLLER+AKD F A+H KL++LVDP+LF+GR+P+QV
Sbjct: 313 RIILPEGFLAVDVILTLLSNIADGLHVWPEVVKSHVMAELPFMSTEVILMECVKAGGDRQELHEAIRVHSMAAGAVVKGEGKPNDLLERIAKDSMFSAIHDKLDTLVDPSLFVGRAPEQV 432
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A7S4R0K5_9STRA (Adenylosuccinate lyase n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R0K5_9STRA) HSP 1 Score: 191 bits (485), Expect = 6.440e-56 Identity = 90/120 (75.00%), Postives = 103/120 (85.83%), Query Frame = 1
Query: 1 QMYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHGKLESLVDPNLFIGRSPKQV 360
++ LPEGFLA DV+ LL+NIADGLHVWP +VR VMAELPFMATE ILMECVKAGGDRQ+LHE IRVHSM AG VKGEGKANDL+ER+A DP F VHGKLES++DP LF+GR+P+QV
Sbjct: 407 RIVLPEGFLAVDVILNLLANIADGLHVWPNVVRKHVMAELPFMATEVILMECVKAGGDRQELHEAIRVHSMDAGAVVKGEGKANDLMERIANDPIFAPVHGKLESMIDPILFVGRAPEQV 526
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A7S3LFQ6_9STRA (Adenylosuccinate lyase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFQ6_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.360e-55 Identity = 86/120 (71.67%), Postives = 103/120 (85.83%), Query Frame = 1
Query: 1 QMYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHGKLESLVDPNLFIGRSPKQV 360
++ LPEGFLA DV+ LL NI+DGLHVWP +VR VMAELPFMATENI+MECVKAGGDRQDLHE+IRVHSMAAG VKGEGK NDL+ER+ KD F+AVH KL+ ++DP+ F+GR+P+QV
Sbjct: 350 RIILPEGFLAVDVILNLLENISDGLHVWPEVVRAHVMAELPFMATENIMMECVKAGGDRQDLHEEIRVHSMAAGAVVKGEGKPNDLMERIKKDDKFKAVHAKLDDMIDPSKFVGRAPEQV 469
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A448YZE1_9STRA (Adenylosuccinate lyase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZE1_9STRA) HSP 1 Score: 188 bits (477), Expect = 3.380e-55 Identity = 88/120 (73.33%), Postives = 103/120 (85.83%), Query Frame = 1
Query: 1 QMYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHGKLESLVDPNLFIGRSPKQV 360
++ LPEGFLA DV+ TLL+NI DGLHVWP +V+ VMAELPFM+TE ILMECVKAGGDRQ+LHE IRVHSM AG VKGEGK NDL+ER+AKDP F AVH KL++LVDP LF+GR+P+QV
Sbjct: 351 RIILPEGFLAVDVILTLLTNIGDGLHVWPEVVKAHVMAELPFMSTEVILMECVKAGGDRQELHEAIRVHSMDAGAVVKGEGKPNDLMERIAKDPLFAAVHDKLDTLVDPKLFVGRAPQQV 470
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A7S2UPT1_9STRA (Adenylosuccinate lyase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPT1_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.130e-54 Identity = 86/120 (71.67%), Postives = 103/120 (85.83%), Query Frame = 1
Query: 1 QMYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHGKLESLVDPNLFIGRSPKQV 360
++ LPEGFLA DV+ L++NIADGLHVWP +V++ VMAELPFMATE ILMECVKAGGDRQ+LHE IRVHSMAAG VKGEGK NDLLER+A DP F VH +LE+++DP LF+GR+P+QV
Sbjct: 341 RIILPEGFLAVDVILNLVANIADGLHVWPNVVKSHVMAELPFMATEVILMECVKAGGDRQELHEAIRVHSMAAGAVVKGEGKPNDLLERIANDPVFTHVHAQLENMIDPILFVGRAPEQV 460
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A7S3PZH9_9STRA (Adenylosuccinate lyase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZH9_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.650e-54 Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 1
Query: 1 QMYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHGKLESLVDPNLFIGRSPKQV 360
++YLPEGFLA DV+ LLSNI DGLHVWP +++ RVM+ELPFM+TE ILMECVK GGDRQ+LHE IRVHSM AG VKGEGK NDL+ER+AKDP F+AVH L+ L+DP LF+GR+P+QV
Sbjct: 352 RIYLPEGFLAVDVILNLLSNIGDGLHVWPAVIKARVMSELPFMSTEVILMECVKKGGDRQELHEAIRVHSMDAGAVVKGEGKPNDLMERIAKDPMFKAVHDDLDRLIDPVLFVGRAPEQV 471
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Match: A0A7S0C5S7_9STRA (Adenylosuccinate lyase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C5S7_9STRA) HSP 1 Score: 184 bits (467), Expect = 4.700e-54 Identity = 86/120 (71.67%), Postives = 102/120 (85.00%), Query Frame = 1
Query: 1 QMYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMECVKAGGDRQDLHEKIRVHSMAAGMAVKGEGKANDLLERVAKDPAFEAVHGKLESLVDPNLFIGRSPKQV 360
++ LPEGFLA DV+ LL NI+DG+HVWP +VR RVM+ELPFMATE ILMECVKAGGDRQ+LHE IRVHSMAAG VKGEGK NDL+ER+ KD F +VH KLESL+DP+LF+GR+ +QV
Sbjct: 313 RIILPEGFLAVDVILNLLLNISDGMHVWPSVVRARVMSELPFMATEVILMECVKAGGDRQELHEAIRVHSMAAGAVVKGEGKPNDLMERIKKDALFSSVHDKLESLIDPSLFVGRAAEQV 432 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111924.971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig111924.971.1 >prot_H-elongata_contig111924.971.1 ID=prot_H-elongata_contig111924.971.1|Name=mRNA_H-elongata_contig111924.971.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp MYLPEGFLAADVLATLLSNIADGLHVWPGMVRTRVMAELPFMATENILMEback to top mRNA from alignment at H-elongata_contig111924:661..1709- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig111924.971.1 ID=mRNA_H-elongata_contig111924.971.1|Name=mRNA_H-elongata_contig111924.971.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1049bp|location=Sequence derived from alignment at H-elongata_contig111924:661..1709- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig111924:661..1709- >mRNA_H-elongata_contig111924.971.1 ID=mRNA_H-elongata_contig111924.971.1|Name=mRNA_H-elongata_contig111924.971.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=714bp|location=Sequence derived from alignment at H-elongata_contig111924:661..1709- (Himanthalia elongata Himel1 dioecious)back to top |