mRNA_H-elongata_contig111875.967.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: D7FH29_ECTSI (Flavoprotein Monooxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH29_ECTSI) HSP 1 Score: 198 bits (504), Expect = 9.130e-57 Identity = 93/118 (78.81%), Postives = 101/118 (85.59%), Query Frame = 1
Query: 10 DRWSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLREYWDEPDGHIEAFYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKLRATNVFDIDDWL 363
DRWSSGNITLLGDACHP TPNNGQGACMAIEDA VLATLL E+W+ PDGH+EAFY YERARL HTR VQ +S +QMKLGQLT+ G WLRELVI A+P S +QKKLRA NVFDID WL
Sbjct: 834 DRWSSGNITLLGDACHPATPNNGQGACMAIEDALVLATLLAEHWERPDGHVEAFYLYERARLTHTRRVQGESRKQMKLGQLTNPAGIWLRELVIGALPASFLQKKLRAANVFDIDPWL 951
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: A0A836CF39_9STRA (FAD_binding_3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF39_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.540e-44 Identity = 75/117 (64.10%), Postives = 90/117 (76.92%), Query Frame = 1
Query: 13 RWSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLREYWDEPDGHIEAFYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKLRATNVFDIDDWL 363
RWS+ +TL+GDACH TPNNGQGACMAIEDAFVLA LLR YWD+PDGH+EAFYQYERAR AHT + +S +QM++GQL LR+ V+R +P V+Q+KLRA NVFD WL
Sbjct: 949 RWSTSRVTLIGDACHAVTPNNGQGACMAIEDAFVLAVLLRRYWDQPDGHVEAFYQYERARRAHTARIHAESYKQMRIGQLAPP----LRDAVLRLLPVGVMQRKLRAANVFDARPWL 1061
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: UPI001E1D3748 (aurachin C monooxygenase/isomerase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3748) HSP 1 Score: 120 bits (301), Expect = 7.240e-31 Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 13 RWSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLREYWDEPDGHIEAFYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKLRATNVFDID 354
+WS+ + L+GD+ H TPN GQGAC +ED+FVLA + YW E DGH+EAFYQYERAR + V+ ++ Q++LGQL G LR+ +++ +P S +++KLR N +D+D
Sbjct: 172 KWSTVRVVLVGDSAHTVTPNMGQGACQGVEDSFVLAVNIARYWHEADGHLEAFYQYERARKPYASAVRAEARTQLRLGQLRHPVGVALRDALLKTMPSSFLERKLRRLN-YDVD 284
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: A0A2P6NCS8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NCS8_9EUKA) HSP 1 Score: 119 bits (299), Expect = 5.790e-29 Identity = 59/120 (49.17%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 10 DRWSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLR-EYWDEP-DGHIEAFYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKLRATNVFDIDDWL 363
+RW S + L+GD+ HP TPN GQGA +A+EDAF L LL YW+ P DGH EAFYQY AR HTR V +S +Q K+GQ TS LRE ++R +P S +Q +L+ TN++ + W+
Sbjct: 683 NRWCSERMALIGDSAHPITPNMGQGANLAVEDAFTLCVLLGLHYWNHPRDGHQEAFYQYYHARSPHTRRVGAESYKQSKMGQWTSPLMVKLREAILRYLPASFLQAQLKRTNLWRVQSWI 802
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: A0A2V3J5W0_9FLOR (FAD-dependent urate hydroxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W0_9FLOR) HSP 1 Score: 118 bits (296), Expect = 1.460e-28 Identity = 55/112 (49.11%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 16 WSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLREYWDEPDGHIEAFYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKLRATNVFDI 351
WSS + L+GDA H +PN GQGAC+AIEDA L+T L YW E DGH+EAFY+YE R + + RD+ +Q+K+GQL + LR L++R VP +V+QK L+ ++FD+
Sbjct: 649 WSSPRVALIGDAAHVVSPNMGQGACLAIEDAVALSTQLATYWHEADGHVEAFYEYEMMRKSFVGAIVRDTRKQLKVGQLQAWPAVALRNLLLRIVPATVLQKTLKQ-SIFDV 759
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: A0A0G4IS83_PLABS (FAD_binding_3 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IS83_PLABS) HSP 1 Score: 111 bits (277), Expect = 5.330e-26 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 13 RWSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLREYWDEPDGHIEAFYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKLRATNVFDIDD 357
RWSS + L+GDA HP TPN GQGAC+AIEDAF+LAT + +Y DG IEA YQYE+ R+A +GV R S Q +GQ+++ WLR+ + +P + KLR+ N DD
Sbjct: 633 RWSSQHSVLVGDAAHPITPNMGQGACLAIEDAFILATGIGKYGSYADGDIEARYQYEQRRMAFVKGVARSSHMQSIIGQVSNPILVWLRDNLFYKLPATFFISKLRSNNFAIADD 747
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: A0A4Y6Q3B3_9DELT (FAD-dependent oxidoreductase n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q3B3_9DELT) HSP 1 Score: 94.0 bits (232), Expect = 2.920e-20 Identity = 55/111 (49.55%), Postives = 65/111 (58.56%), Query Frame = 1
Query: 1 RLDDRWSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLL--REYWDEPDGHIEAFYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKL 327
R D WS G +TLLGDA HPTTPN GQG CMAIEDA +LA LL RE DE A YER R+ T + DS R K+GQ + WLR+ R P SV++ +L
Sbjct: 271 RPRDAWSRGAVTLLGDAAHPTTPNLGQGGCMAIEDAGMLAELLVRRETLDE------ALDAYERLRIPRTSKLVNDSWRFGKIGQWRNPAAVWLRKTAARLAPASVMRAQL 375
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: A0A3B8PUS0_9BACT (FAD_binding_3 domain-containing protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3B8PUS0_9BACT) HSP 1 Score: 93.2 bits (230), Expect = 5.380e-20 Identity = 54/107 (50.47%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 13 RWSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLREYWDEPDGHIEA-FYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKLR 330
RWS G +TLLGDA HPTTPN GQGACMAIEDA VLA + +IE+ F YE R+A T V DS R +L + + +REL+ RA P VVQ+ LR
Sbjct: 271 RWSRGCVTLLGDAAHPTTPNLGQGACMAIEDAEVLAHAIAS-----QSNIESVFCAYEARRVARTTAVTNDSWRYGQLARWQNPFAVTVRELIFRATPSFVVQRSLR 372
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: A0A0D3LBP4_9BACT (FAD-dependent oxidoreductase n=1 Tax=Flammeovirgaceae bacterium 311 TaxID=1257021 RepID=A0A0D3LBP4_9BACT) HSP 1 Score: 92.4 bits (228), Expect = 1.020e-19 Identity = 52/122 (42.62%), Postives = 69/122 (56.56%), Query Frame = 1
Query: 1 RLDDR-WSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLREYWDEPDGHIEAFYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKLRATNVFDIDDWL 363
RL R WS G +TLLGDA HPTTPN GQGACMAIE A++L+ L +Y H +AF QYE+ T+ + SL K+GQL LR V++ +P + K L +D+ + L
Sbjct: 263 RLPQRGWSQGRVTLLGDAAHPTTPNLGQGACMAIEGAYLLSASLHQY----PSHEQAFAQYEKLHYPRTKDIVEQSLLNGKMGQLEHPLLVSLRNGVVKLMPDKLSAKMLDKYFSYDVTNVL 380
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Match: A0A850GHL7_9DELT (FAD-dependent monooxygenase n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850GHL7_9DELT) HSP 1 Score: 91.3 bits (225), Expect = 3.480e-19 Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 13 RWSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLREYWDEPDGHIEAFYQYERARLAHTRGVQRDSLRQMKLGQLTSRTGTWLRELVIRAVPPSVVQKKLRA 333
RW++G + LLGDA H TPN GQGAC AIEDA VLA+ L E D+ +YER R+A R SLR GQ ++ WLREL R P ++V++ L A
Sbjct: 273 RWTTGRVALLGDAAHAMTPNMGQGACQAIEDAVVLASCLAERGDQDTA--AGLAEYERLRMARARSFVDRSLRLGAAGQWSNPLAVWLRELGARLAPAAIVERGLEA 377 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111875.967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig111875.967.1 >prot_H-elongata_contig111875.967.1 ID=prot_H-elongata_contig111875.967.1|Name=mRNA_H-elongata_contig111875.967.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp RLDDRWSSGNITLLGDACHPTTPNNGQGACMAIEDAFVLATLLREYWDEPback to top mRNA from alignment at H-elongata_contig111875:1016..1855- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig111875.967.1 ID=mRNA_H-elongata_contig111875.967.1|Name=mRNA_H-elongata_contig111875.967.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=840bp|location=Sequence derived from alignment at H-elongata_contig111875:1016..1855- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig111875:1016..1855- >mRNA_H-elongata_contig111875.967.1 ID=mRNA_H-elongata_contig111875.967.1|Name=mRNA_H-elongata_contig111875.967.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig111875:1016..1855- (Himanthalia elongata Himel1 dioecious)back to top |