prot_H-elongata_contig11186.965.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11186.965.1
Unique Nameprot_H-elongata_contig11186.965.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length590
Homology
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BLAST of mRNA_H-elongata_contig11186.965.1 vs. uniprot
Match: A0A6H5JI45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI45_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 2.440e-11
Identity = 73/184 (39.67%), Postives = 90/184 (48.91%), Query Frame = 0 
Query:  384 PSAVMLSPGTDSDRGSSLSPEKLPGVGIDTSVGGLEGED-------ESSEAEPKEEQHEVSGXXXXXXXXXESDSEMDETTRAEARTASISLSPQSAK--SAGSSMWLTPCFRGQGSFSAIRHEQEASKGGGGRDAPR-GRLAERAGKMRALGALDIMQVIGTISDSKSIDEAREARELSPRIR 557
            PS VMLSPGTDSD GSS SPE L         GG  G++       E   A  KEE+ E+                  E T +      +++SP SA   S GS++W +  F         R     S GG G D  R G LA R+GKMRALG LD+MQV+GT SDS+S  +  +  E SPR R
Sbjct: 1709 PSRVMLSPGTDSDPGSSPSPEVLVRRSSRPFSGGDAGQEGFAPHPQEEGAAAQKEEETEIGEGAQSAVTH--------EPTPSPDDVHGVTVSPPSASDSSLGSNLWCSGPF--------ARSTFGKSMGGQGADEARDGLLATRSGKMRALGTLDLMQVVGTFSDSESPSDDIDIEETSPRAR 1876
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11186.965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI45_9PHAE2.440e-1139.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11186contigH-elongata_contig11186:1766..5343 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11186.965.1mRNA_H-elongata_contig11186.965.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11186 1714..5409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11186.965.1 ID=prot_H-elongata_contig11186.965.1|Name=mRNA_H-elongata_contig11186.965.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=590bp
MIVETARAQERRSMTNRTRGQHGGSGLSVLRNTWQGFMGGRDRGTIRQHC
RASQSQGVSTWYRHSGSESTDTGLRPRLRQHPSATEGWESVPSSLGSGTG
TGSISSASTSTARVSGDYLSYPTAASTESDLSLSEVFPAAVSPAGLAAAS
ASSAADLFPSPTGHDAAADVFEESTAAGGSSSLSPSLSPSLSLSSDAFTS
PRNDYTPTRNPNPRERDIPDTFGGRSPMAMVRPVPGRLKVAVAEAAAETA
AEEEAKREGKRKAEEQGEARERSPRSGAISSPVEIDAARAEPLPMHGTSF
PSRLAVPQGMPQAMAMLSPSSPIGDASSTRRGRGSSLAPATVELQPRLTF
GDGSLRLRAGTVGRGRGRAREDAGRAGPTSSLSPSAVMLSPGTDSDRGSS
LSPEKLPGVGIDTSVGGLEGEDESSEAEPKEEQHEVSGGDGDGESGRESD
SEMDETTRAEARTASISLSPQSAKSAGSSMWLTPCFRGQGSFSAIRHEQE
ASKGGGGRDAPRGRLAERAGKMRALGALDIMQVIGTISDSKSIDEAREAR
ELSPRIRRTMSPRAQALIAEGRPTSPIHVVVPYTDAQTR*
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