prot_H-elongata_contig111829.962.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig111829.962.1
Unique Nameprot_H-elongata_contig111829.962.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length49
Homology
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: A0A6H5KU22_9PHAE (UAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU22_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 8.680e-22
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 QPSISEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGFLGTPEFIEK 49
            QPSISEEAK YCRRYN TGFPHIALIDPRTG++VW++QGFL  PEFIEK
Sbjct:  263 QPSISEEAKLYCRRYNATGFPHIALIDPRTGMRVWNFQGFLAPPEFIEK 311          
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: D7FS95_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS95_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.460e-21
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 QPSISEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGFLGTPEFIEK 49
            QPSISEEAK YCRRYN TGFPHIALIDPRTG+KVW++ GFL  PEFIEK
Sbjct:  263 QPSISEEAKLYCRRYNATGFPHIALIDPRTGMKVWNFHGFLAPPEFIEK 311          
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: A0A1Z5JIC2_FISSO (UBX domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIC2_FISSO)

HSP 1 Score: 52.0 bits (123), Expect = 2.040e-6
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    1 QPSISEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGF 40
            Q  I+ E +TY  RY VT +PH+A+IDPRTG  VW  +G+
Sbjct:  228 QRDITPEGQTYVERYKVTDYPHVAIIDPRTGRLVWKKEGW 267          
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: A0A7S1E568_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E568_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 1.590e-5
Identity = 19/42 (45.24%), Postives = 26/42 (61.90%), Query Frame = 0
Query:    5 SEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGFLGTPEF 46
            S + +TY  RY V  FPHIA++DPRTG  +W  +G+     F
Sbjct:   12 SADGQTYAERYKVCAFPHIAIVDPRTGRSLWKKEGWTQVKPF 53          
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: K0RPX8_THAOC (UBX domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RPX8_THAOC)

HSP 1 Score: 48.9 bits (115), Expect = 2.500e-5
Identity = 20/49 (40.82%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    5 SEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGF-----LGTPEFIE 48
            S E +TY +RY V+G+PH+ ++DPRTG  +W  +G+     L   +F+E
Sbjct:  130 SAEGQTYVQRYRVSGYPHLGIVDPRTGTLLWRKEGWTQVEPLTAEQFVE 178          
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: A0A7S1E3V9_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E3V9_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.040e-5
Identity = 19/42 (45.24%), Postives = 26/42 (61.90%), Query Frame = 0
Query:    5 SEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGFLGTPEF 46
            S + +TY  RY V  FPHIA++DPRTG  +W  +G+     F
Sbjct:   12 SADGQTYAERYKVCAFPHIAIVDPRTGRSLWKKEGWTQVKPF 53          
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: A0A7S4JAM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAM1_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.180e-5
Identity = 17/37 (45.95%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    4 ISEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGF 40
            +S +  TY +RY+V  +PH+A+IDPRTG  +W  +G+
Sbjct:  155 VSNDGSTYAQRYSVLSYPHVAIIDPRTGRLMWKKEGW 191          
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: A0A7S4JAM3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAM3_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.420e-5
Identity = 17/37 (45.95%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    4 ISEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGF 40
            +S +  TY +RY+V  +PH+A+IDPRTG  +W  +G+
Sbjct:  155 VSNDGSTYAQRYSVLSYPHVAIIDPRTGRLMWKKEGW 191          
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: A0A2C6LBM1_9APIC (Thioredoxin-like protein (Fragment) n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6LBM1_9APIC)

HSP 1 Score: 47.4 bits (111), Expect = 8.790e-5
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    5 SEEAKTYCRRYNVTGFPHIALIDPRTG--LKVWSYQGF---LGTP----EFIEK 49
            + E K +C  Y V  FPHIA+IDPRTG  +K WSY+ F   +G      EF+EK
Sbjct:  278 TSEGKVFCELYKVFTFPHIAVIDPRTGRSMKQWSYRRFSEPVGAQSELFEFLEK 331          
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Match: B8CEK1_THAPS (UBX domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEK1_THAPS)

HSP 1 Score: 47.4 bits (111), Expect = 8.790e-5
Identity = 20/51 (39.22%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    3 SISEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGF-----LGTPEFIE 48
            S + + +TY  RY V G+PH+A++DPRTG  +W  +G+     L   +F+E
Sbjct:  344 SNTNDGQTYITRYKVQGYPHLAILDPRTGSLLWKKEGWTQVDPLTAEQFVE 394          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111829.962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KU22_9PHAE8.680e-2283.67UAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FS95_ECTSI2.460e-2183.67UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1Z5JIC2_FISSO2.040e-652.50UBX domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A7S1E568_9STRA1.590e-545.24Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
K0RPX8_THAOC2.500e-540.82UBX domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S1E3V9_9STRA3.040e-545.24Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S4JAM1_9STRA3.180e-545.95Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S4JAM3_9STRA3.420e-545.95Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A2C6LBM1_9APIC8.790e-548.15Thioredoxin-like protein (Fragment) n=1 Tax=Cystoi... [more]
B8CEK1_THAPS8.790e-539.22UBX domain-containing protein n=1 Tax=Thalassiosir... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 2..49
e-value: 2.0E-9
score: 39.5
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 5..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111829contigH-elongata_contig111829:345..491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111829.962.1mRNA_H-elongata_contig111829.962.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig111829 345..491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig111829.962.1 ID=prot_H-elongata_contig111829.962.1|Name=mRNA_H-elongata_contig111829.962.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp
QPSISEEAKTYCRRYNVTGFPHIALIDPRTGLKVWSYQGFLGTPEFIEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf