mRNA_H-elongata_contig11182.961.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: D8LT20_ECTSI (Predicted unusual protein kinase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT20_ECTSI) HSP 1 Score: 483 bits (1243), Expect = 2.880e-167 Identity = 262/326 (80.37%), Postives = 292/326 (89.57%), Query Frame = 1
Query: 1 QNKVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQRLNGLLSVMATSGGSRDTGK 978
+ +VEPVMKRVIGPYVFEGGGAKSLNYQSLARDL RATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISD+SPALQRALRDILY+EDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTL+F+L E+ARPLRAALVGEASNAADL+LRR TRQA+ A+DLLRPPPPX XXXXXXXXXP P+P+SVVDALSP+LT EED+FLASL+ELAYAL+G+E+GT+SDDPL +RQLL+ + G G L EF + LPGDS KT+A+ +VGSEVVQNLAD+ S+R NGLLS + RD G+
Sbjct: 31 RGQVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLARATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASERFNGLLSGGSGXXXXRDAGR 356
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A6H5KBP7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP7_9PHAE) HSP 1 Score: 482 bits (1240), Expect = 2.980e-159 Identity = 259/313 (82.75%), Postives = 288/313 (92.01%), Query Frame = 1
Query: 1 QNKVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQRLNGLLS 939
+ +VEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISD+SPALQRALRDILY+EDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTL+F+L E+ARPLRAALVGEASNAADL+LRR TRQA+ A+DLLRPPPPX XXXXXXXXXP P+P+SVVDALSP+LT EED+FLASL+ELAYAL+G+E+GT+SD+PL +RQLL+ + G G L EF + LPGDS KT+A+ +VGSEVVQNLAD+ S+R NGLLS
Sbjct: 581 RGQVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDNPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASKRFNGLLS 893
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A835YL56_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL56_9STRA) HSP 1 Score: 267 bits (682), Expect = 2.040e-75 Identity = 164/332 (49.40%), Postives = 212/332 (63.86%), Query Frame = 1
Query: 7 KVEPVMKRVIGPYVFEGGGAKSLNYQ--------------------------------SLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILY---TEDGK----FLAKRLSVLLSYATG---VVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTIS----DDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDA 864
KVEP+M+RVI PYVF+GGGAK+LNYQ SLA DLGRATLEIPFNIP YFAL+ARALGILEG+ALTGDPDY+IV+EAYP+VTR+I +D+SP L+RAL+DILY T DG RL+ LL+YA G A VFVDFD++PST A L++ + F+LG+ AR LR ALVGE ++A DL+LR++TR+ ++ LL+PPP L PLP+P ++DALSP+L+ EE+VF SL +L AL GV+ + + P LR+LL TDN+ + L EFA+ + DS + DA
Sbjct: 435 KVEPIMRRVIAPYVFQGGGAKNLNYQVCTRAHHGSSAPKXXXXXXXXXXXXXXXXXXXSLAADLGRATLEIPFNIPSYFALVARALGILEGIALTGDPDYKIVLEAYPYVTRRITTDDSPLLRRALQDILYSGSTADGTAAPALSITRLANLLTYAMGNTDAAAGGGPVFVDFDSVPSTGAKLNEVMGFLLGDSARSLRKALVGEIASATDLVLRQTTRRGLSRLEALLQPPP--LPFLPRLPSLPLPVPKRLLDALSPQLSIEEEVFAKSLTDLGLALLGVDADSAAALDNGRPDVLLRKLLSTDNSSA---QELLEFARTVQADSPQFDA 761
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A250XDH8_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDH8_9CHLO) HSP 1 Score: 197 bits (500), Expect = 7.370e-52 Identity = 115/274 (41.97%), Postives = 168/274 (61.31%), Query Frame = 1
Query: 10 VEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRP--------PPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGV 807
+ PVM RV+GPY+ GGGAK+ N+ +L++DL TLEIPF++PPY +L+AR++ LEG+AL GDPDY++V +AYPFV RKI+ ++S LRDILY +GK R+S LL+ A G V++ S FVDFD++P A++ + L+F+L +A+ LR LV + + DL+LR R+ L P P P L +P+P+++ D L+P L PEE VFL SL EL+ +L+G+ D + QLLR ++ +A V
Sbjct: 466 ITPVMDRVLGPYL-RGGGAKAFNFSALSQDLLSVTLEIPFSVPPYMSLLARSVATLEGIALAGDPDYQMVTQAYPFVVRKILRNDSTGTGGLLRDILYDNEGKVKPTRMSALLNAALGYVSSKSEGFVDFDSIPDEGATVQEVLQFLLSPEAKDLRPLLVSQLVSGLDLLLRDRVRKLYNVTLPALVPRLPFFGAIPTPPLPPLLVPGLGFMPVPEAL-DLLAPPLAPEEGVFLNSLTELSASLTGLSLSDFEDPEPQRVIQLLRELSSALAAV 737
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A2V0PLP2_9CHLO (Protein kinase domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PLP2_9CHLO) HSP 1 Score: 195 bits (496), Expect = 3.390e-51 Identity = 129/317 (40.69%), Postives = 177/317 (55.84%), Query Frame = 1
Query: 16 PVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPIP---------------DSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQR 921
PVM+RV+GPY+ GGGA+S N+Q+L++DL TLEIPF++PPY +L+ARA+ LEG+AL GDP Y++V +AYPFV R+++ ++S LR++L+ G+ RLS LL A G VA S FVD D+LP A+ S+ L FVL +AR LR LV + ADL++R R+A+A+A L P P L PLP+P D+ VD +P L +E V+LASL EL + G+ I LG L L N G E LA A+ GD T A V ++V +A + R
Sbjct: 451 PVMERVLGPYL-RGGGARSFNFQALSQDLLSVTLEIPFSVPPYMSLLARAVATLEGIALLGDPQYQMVAQAYPFVARRVLRNDSSGAGALLREMLFDSQGQLRPARLSALLQAALGYVADKSEGFVDLDSLPEEGATTSEVLRFVLSPEARDLRPLLVSWLATGADLLIRDRARKALAAAPSLA-PRLPLLG--------PLPLPXXXXXXXXGLGLVPLDAAVDLFAPPLDAQEGVYLASLLELLAGVLGIPAAQIDSPDLGRLLGLFT--NPGAQARE-LAGALSAVAGDPGSTAAAAGVAADVADAVAATLAAR 754
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A836B1N9_9CHLO (Protein kinase domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A836B1N9_9CHLO) HSP 1 Score: 191 bits (486), Expect = 8.030e-50 Identity = 128/333 (38.44%), Postives = 180/333 (54.05%), Query Frame = 1
Query: 16 PVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDG---------------KFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQA--------------IASARDLLRPPPPXLXXXXXXXXXPLPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGV-EILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQRL 924
PVM RV+ PY+ GGGA + N+Q+L++DL ATLEIPF++PPY +L+AR++ LEG+AL GDP Y +V +AYPFV RK++ ++S + LRD+L D + A+RL+ LL+ A G VA + FVDFD LP AS+ + F+L +AR LR LVG S+ DL+LR R+A I S L PPPP + LP+ V+ L+P L P E V+L L ELA ++ GVE + D L +L QL + + V + +L A A G + EV EVV LA++ + R+
Sbjct: 466 PVMDRVLSPYL-RGGGAAAFNFQALSQDLLAATLEIPFSVPPYMSLLARSVATLEGIALAGDPQYAMVAQAYPFVARKVLRNDSSSASALLRDLLLIRDAAGAGGADGGEAGSRQQLAARRLAALLNAALGYVADSAGGFVDFDALPEEGASVQEIASFLLSPEARELRPLLVGWVSDGLDLLLRDRLRKAYNLASASLTPRLPFIGSLPAALMPPPPPVWVPGKGL---LPV-GQAVELLAPPLEPSEQVYLQQLTELAASVLGVEPSALEDPSLNSLLQLASSPSDQVRELANVLGNVAGA--GSGKNLMTATEVAVEVVDKLAEQQAGRV 791
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A7S3VU42_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VU42_DUNTE) HSP 1 Score: 190 bits (482), Expect = 1.930e-49 Identity = 128/315 (40.63%), Postives = 184/315 (58.41%), Query Frame = 1
Query: 7 KVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVA--ADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPP-PXLXXXXXXXXXPLPIP-------DSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLADKTSQR 921
++ PVM RV+ PY+ GGGA + N+ +L++DL TLEIPF++PPY +LIAR++ LEG+AL+GDP Y++V +AYPFV RK++ ++S + L+DIL+ DGK RL LL+ G VA SA F+D D +P AS+S+ + F+L +AR LR LV E SN DL LR R+A A LL PP P LXXXXXXXXXP+ +P D V+ L+P L E V+L SL EL L GV + +++ +L+ V+ + + + G+ + + + +VV LA K +R
Sbjct: 469 RIIPVMDRVLSPYL-RGGGAAAYNFSALSQDLLSVTLEIPFSVPPYMSLIARSVVTLEGIALSGDPQYQMVAQAYPFVVRKVLRNDSNSSMALLQDILFDNDGKVKPTRLGALLNAGLGYVADAKQSAGFIDIDAVPDDGASVSEVVAFLLSPEARELRPLLVREISNGLDLFLRDRFRKAYALLPGLLAPPRLPFLXXXXXXXXXPVFLPGIGLIAADEAVEKLAPPLNSAEQVYLVSLMELTANLLGVSVAELESPTASSIQGMLQMATNPSEQVQEIGDALNTMSGNRANLEVVQAIVLDVVNTLASKQEER 782
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A383VLQ5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VLQ5_TETOB) HSP 1 Score: 189 bits (480), Expect = 6.490e-49 Identity = 119/309 (38.51%), Postives = 170/309 (55.02%), Query Frame = 1
Query: 16 PVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXP-------------LPIPDSVVDALSPRLTPEEDVFLASLKELAYALSGVEEGTISDDPLGALRQLLRTDNAGVAGVEILAEFAQALPGDSRKTDALLEVGSEVVQNLA 903
PVM+RV+GPY+ GGGAK+ N+Q+L++DL T+EIPF++PPY +L+AR++ LEG+ALT DP Y++V +AYPFV RK++ D+ LRD++Y E GK RLS LL A G V+ FVDFD +P+ AS + L FVL +AR LR LVG + AADL++R R+A A+ LL P P X LP+P++V + L+P L+ +E ++ SL EL + V + L +L+ G E+ A GD+ A +V VV +A
Sbjct: 512 PVMERVLGPYL-RGGGAKAFNFQALSQDLLTTTMEIPFSVPPYMSLLARSVATLEGIALTADPGYQMVAQAYPFVARKVLRDDGSGTAALLRDLVYDEQGKLRPGRLSALLQAALGYVSEQGEGFVDFDAVPAEGASAGEVLAFVLSPEARELRPLLVGWLAGAADLVIRDRARKAAAALPGLLTPRLPFAALLGLPSLXXXXXXXVFLPGLGLLPLPEAV-ERLAPPLSDQEVIYYQSLLELVAGILDVPPAQLESPGFDTLARLIT--QPGEQAKELQQALVAATNGDAGTAAAAADVAVAVVDEVA 816
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A7S0G2P8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2P8_9RHOD) HSP 1 Score: 177 bits (450), Expect = 1.060e-48 Identity = 92/178 (51.69%), Postives = 129/178 (72.47%), Query Frame = 1
Query: 7 KVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIIS-DESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTR 537
KVE VM +V+GP+V++GGGAK+++++SLARDL T EIPF+IPPY+AL+ RA+ LEG+AL +PDYR+VMEAYP+V R+++S D++P LQRAL +ILY +DG F RL+ LL+ A G V VDFD++P A+ S+ LEFVL ++ +R L E + A D++LRR R
Sbjct: 65 KVEIVMGKVLGPFVYQGGGAKNVDFRSLARDLAGVTREIPFSIPPYYALVGRAIISLEGIALQANPDYRLVMEAYPYVARRVMSEDDTPELQRALAEILY-KDGGFSVNRLAALLNSAMGYVGMSKDAIVDFDSIPEDGATASKFLEFVLSSQSKSIRGTLSVELAKAIDIVLRRMVR 241
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Match: A0A812UJN5_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812UJN5_9DINO) HSP 1 Score: 186 bits (472), Expect = 4.020e-48 Identity = 111/254 (43.70%), Postives = 163/254 (64.17%), Query Frame = 1
Query: 10 VEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKII--SDESPALQRALRDILYTEDGKFLAKRLSVLLSYATGVVA-ADSAV-FVDFDTLPSTAASLSQTLEFVLGEDARPLRAALVGEASNAADLILRRSTRQAIASARDLLRPPPPXLXXXXXXXXXPLPI----------PDSVVDALSPRLTPEEDVFLASLKELAYALSGVE 729
+ PVM+RV+ PY+ +GGGAK++N+ +L +DL +ATLEIPF+IPP+ +L+AR++ LEG+AL G+P+YRIV EAYPFV R+++ SD S L ALR++L DG+ A RLS LL A G VA AD+A F+DF+ +P A+ + ++F+L R L+ LV E S DL++R STR+A + L+P P PLP+ PDS++DAL P+L+ +E+++L S + AL GV+
Sbjct: 489 IVPVMQRVLKPYL-KGGGAKAMNFSALGQDLLQATLEIPFSIPPWVSLLARSIATLEGIALAGNPNYRIVAEAYPFVVRQLLEGSDGSSRLTLALRELLLDADGRVQAVRLSALLQAALGAVASADNADGFIDFEAVPEHGANPQEVVDFLLSPSGRSLKPLLVQELSTTVDLVVRTSTRRAYLDLQAALKPRVPVFGALPTPPPPPLPVITPKGPKMVSPDSLLDALQPKLSQDEELYLQSSASVFLALLGVD 741 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11182.961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11182.961.1 >prot_H-elongata_contig11182.961.1 ID=prot_H-elongata_contig11182.961.1|Name=mRNA_H-elongata_contig11182.961.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=338bp MKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGback to top mRNA from alignment at H-elongata_contig11182:4127..8108- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11182.961.1 ID=mRNA_H-elongata_contig11182.961.1|Name=mRNA_H-elongata_contig11182.961.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3982bp|location=Sequence derived from alignment at H-elongata_contig11182:4127..8108- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11182:4127..8108- >mRNA_H-elongata_contig11182.961.1 ID=mRNA_H-elongata_contig11182.961.1|Name=mRNA_H-elongata_contig11182.961.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2028bp|location=Sequence derived from alignment at H-elongata_contig11182:4127..8108- (Himanthalia elongata Himel1 dioecious)back to top |