prot_H-elongata_contig11134.930.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig11134.930.1
Unique Name	prot_H-elongata_contig11134.930.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	98

Homology

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: A0A835YXC9_9STRA (GTP cyclohydrolase N terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC9_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.080e-46
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 0

Query:    2 DGQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            +GQ+F++K AVEPVWYLPEIA RFG  E+ LRETLFKETNMMYPELVTR DL  FLPPIGGLTIY+FGDP  I DE VPLTVRV+DECNGSDVFGS+
Sbjct:  189 EGQAFVSKAAVEPVWYLPEIARRFGCTELALRETLFKETNMMYPELVTRPDLHVFLPPIGGLTIYIFGDPDTIADESVPLTVRVHDECNGSDVFGSD 285

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: A0A4D9CXZ5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXZ5_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.190e-45
Identity = 72/98 (73.47%), Postives = 82/98 (83.67%), Query Frame = 0

Query:    1 QDGQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            +DGQ  +TK A+EPVWYLP +A RF V E KLRETLF ETNMMYPEL+TR D+K FLPPIGG T+Y+FGDP  IPDE VPLT RV+DECNGSDVFGS+
Sbjct:  169 KDGQVNVTKAAIEPVWYLPAVAERFSVSEAKLRETLFVETNMMYPELITRPDIKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSD 266

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: A0A7S2SSD0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSD0_9STRA)

HSP 1 Score: 160 bits (405), Expect = 5.150e-45
Identity = 75/97 (77.32%), Postives = 85/97 (87.63%), Query Frame = 0

Query:    2 DGQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            DGQS I+K AVEPVW+LP IA RFG  E  LRE LF+ETNMMYPEL+TR D+K FLPPIGGLT+Y++GDPALIPDEDV LTVRV+DECNGSDVFGS+
Sbjct:  213 DGQSHISKVAVEPVWHLPGIAERFGCTEQVLRECLFRETNMMYPELITRPDVKVFLPPIGGLTVYIWGDPALIPDEDVELTVRVHDECNGSDVFGSD 309

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: W7T706_9STRA (Gtp cyclohydrolase ii n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T706_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.060e-44
Identity = 72/98 (73.47%), Postives = 83/98 (84.69%), Query Frame = 0

Query:    1 QDGQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            +DGQ  +TK A+EPVWYLP +A RF V E KLRETLF ETNMMYPEL+TR D+K FLPPIGG T+Y+FGDP  IPDE+VPLT RV+DECNGSDVFGS+
Sbjct:  202 KDGQVNVTKAAIEPVWYLPAVAERFSVSEAKLRETLFVETNMMYPELITRPDIKVFLPPIGGSTVYIFGDPEKIPDENVPLTARVHDECNGSDVFGSD 299

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: A0A6U6N6L8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A6U6N6L8_9DINO)

HSP 1 Score: 155 bits (393), Expect = 2.430e-44
Identity = 70/97 (72.16%), Postives = 83/97 (85.57%), Query Frame = 0

Query:    2 DGQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            DGQSF+TK A+EPVWYLP IA RF V E +LR+++FKETN MYPEL+TR DLK FLPPIGG+T+Y++GDP  IPDE V LT RV+DECNGSDVFGS+
Sbjct:  263 DGQSFVTKAAIEPVWYLPGIAQRFKVSETELRQSIFKETNSMYPELLTRMDLKLFLPPIGGMTVYIWGDPEKIPDESVELTCRVHDECNGSDVFGSD 359

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: A0A7S1U4W9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4W9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.080e-44
Identity = 71/96 (73.96%), Postives = 82/96 (85.42%), Query Frame = 0

Query:    3 GQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            GQS ITK A+EPVWYLPE+A RFG  E  LR  LF+ETNMMYPEL+TR D+K FLPPIGG TIY++GDP  IPDE++PLTVRV+DECNGSDVFGS+
Sbjct:  186 GQSIITKAAIEPVWYLPEVARRFGCSEQDLRLALFRETNMMYPELITRTDMKVFLPPIGGCTIYIWGDPNTIPDENIPLTVRVHDECNGSDVFGSD 281

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: A0A7R9WIM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WIM1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 9.320e-44
Identity = 68/96 (70.83%), Postives = 81/96 (84.38%), Query Frame = 0

Query:    3 GQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            GQS +TK A+EPVWYLPEIA RFG  E  LR+++F+ TN MYPEL+TR D+K FLPPIGGLTIY++GDP  IPDED+ LT RV+DECNGSDVFGS+
Sbjct:   65 GQSVVTKAAIEPVWYLPEIARRFGCTETSLRQSIFRMTNGMYPELITRPDIKIFLPPIGGLTIYIWGDPDTIPDEDIELTCRVHDECNGSDVFGSD 160

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: A0A7S2FI45_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FI45_9STRA)

HSP 1 Score: 156 bits (395), Expect = 9.420e-44
Identity = 74/98 (75.51%), Postives = 82/98 (83.67%), Query Frame = 0

Query:    1 QDGQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            QDGQS ITK AVEPVW LP IA RFG  E  LRETLFKETNMMYPELVTR DL  FLPP+GGLT+Y++G    IPDE++PLTVRV+DECNGSDVFGS+
Sbjct:  172 QDGQSHITKFAVEPVWNLPGIAERFGCTEANLRETLFKETNMMYPELVTRPDLDTFLPPVGGLTVYVWGSVDAIPDENIPLTVRVHDECNGSDVFGSD 269

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: A0A7S2JIP4_9DINO (Hypothetical protein n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2JIP4_9DINO)

HSP 1 Score: 157 bits (398), Expect = 1.610e-43
Identity = 71/97 (73.20%), Postives = 84/97 (86.60%), Query Frame = 0

Query:    2 DGQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            +GQSF+TK A+EPVWYLP +A RFGV E +LRE+LFKETN MYPEL+TR DLK FLPPIGG+T+Y++GDP  I DE V LTVRV+DECNGSDVFGS+
Sbjct:  295 EGQSFVTKAAIEPVWYLPGVAERFGVTEQRLRESLFKETNSMYPELLTRNDLKLFLPPIGGMTVYIWGDPETIADESVELTVRVHDECNGSDVFGSD 391

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BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Match: A0A7S3GY78_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GY78_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.370e-43
Identity = 68/97 (70.10%), Postives = 81/97 (83.51%), Query Frame = 0

Query:    2 DGQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTREDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN 98
            D Q+ +TK A+EPVWYLP +A RF   E  LR+ LFKETNMMYPEL+TR D+K FLPPIGGLTIY++G+P  IPDE +PLTVRV+DECNGSDVFGS+
Sbjct:   53 DAQAMVTKAAIEPVWYLPGVAERFQCTEQALRQALFKETNMMYPELLTRTDIKLFLPPIGGLTIYIWGNPDTIPDESIPLTVRVHDECNGSDVFGSD 149

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot

BLAST of mRNA_H-elongata_contig11134.930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YXC9_9STRA	1.080e-46	79.38	GTP cyclohydrolase N terminal-domain-containing pr...	[more]
A0A4D9CXZ5_9STRA	2.190e-45	73.47	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A7S2SSD0_9STRA	5.150e-45	77.32	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
W7T706_9STRA	1.060e-44	73.47	Gtp cyclohydrolase ii n=1 Tax=Nannochloropsis gadi...	[more]
A0A6U6N6L8_9DINO	2.430e-44	72.16	Hypothetical protein (Fragment) n=1 Tax=Alexandriu...	[more]
A0A7S1U4W9_9STRA	3.080e-44	73.96	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
A0A7R9WIM1_9STRA	9.320e-44	70.83	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]
A0A7S2FI45_9STRA	9.420e-44	75.51	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S2JIP4_9DINO	1.610e-43	73.20	Hypothetical protein n=2 Tax=Brandtodinium nutricu...	[more]
A0A7S3GY78_9STRA	3.370e-43	70.10	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022163	GTP cyclohydrolase N-terminal	PFAM	PF12471	GTP_CH_N	coord: 3..39 e-value: 2.5E-12 score: 47.0
None	No IPR available	PANTHER	PTHR47259	FAMILY NOT NAMED	coord: 2..98
IPR036144	RibA-like superfamily	SUPERFAMILY	142695	RibA-like	coord: 43..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig11134	contig	H-elongata_contig11134:8473..8766 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig11134.930.1	mRNA_H-elongata_contig11134.930.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig11134 8473..8766 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig11134.930.1 ID=prot_H-elongata_contig11134.930.1|Name=mRNA_H-elongata_contig11134.930.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
QDGQSFITKCAVEPVWYLPEIAWRFGVDEVKLRETLFKETNMMYPELVTR
EDLKAFLPPIGGLTIYMFGDPALIPDEDVPLTVRVYDECNGSDVFGSN

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022163	GTP_CH_N
IPR036144	RibA-like_sf