prot_H-elongata_contig11128.927.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11128.927.1
Unique Nameprot_H-elongata_contig11128.927.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length145
Homology
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: D7G767_ECTSI (Selenoprotein T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G767_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 6.510e-57
Identity = 93/141 (65.96%), Postives = 110/141 (78.01%), Query Frame = 0
Query:    1 MRRNFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGGIAITLGGSIIFDTLGVPQPFFVPPMRRNSIPTMIGLFFLNSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISALEKRRLRSTKN 141
            MRRNFEELRSFLH H+P LA+A SIRGELYPPP  AQ LATLGS+ Q+GG+A  L GS+IFD LGVP PFFVP MRRN + T++GL   NSFC   + TGAFEV ID ELVFSRL  +G+FP+GA+L+   EKR LRS ++
Sbjct:  166 MRRNFEELRSFLHAHYPALAKAQSIRGELYPPPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSVRS 306          
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: A0A7S2D3C0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3C0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.110e-28
Identity = 57/134 (42.54%), Postives = 84/134 (62.69%), Query Frame = 0
Query:    1 MRRNFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGGIAITLGGSIIFDTLGVPQPFFVPPMRRNSIPTMIGLFFLNSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISALEKR 134
            M+RNF ELR+FL   +P L     I GE YPPP +A    +    +QMGGI + + GS IF+TLG+P+P +   ++ N +    G+FF+NS  +    TGAFEV +D E+V+S+LE  G+ P+G  LI  +E++
Sbjct:    1 MKRNFVELRNFLAHRYPELQ--GKIAGENYPPPPYANLAVSAAGTVQMGGIVLMMFGSQIFNTLGMPEPEWYKELQENKMMAFCGVFFMNSMANSLTTTGAFEVLLDGEVVYSKLET-GRMPNGRQLIELMEQK 131          
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: A0A6S9L5H0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9L5H0_HETAK)

HSP 1 Score: 99.8 bits (247), Expect = 5.220e-24
Identity = 54/134 (40.30%), Postives = 82/134 (61.19%), Query Frame = 0
Query:    1 MRRNFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGGIAITLGGSIIFDTLGVPQP-FFVPPMRRNSIPTMIGLFFLNSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISALEK 133
            M+RNF EL+ FL   +P L    +++G  YPPP FA  LA LG+    GGIA+T  G  +F  +G+  P  +   M+ N +P + GLF LN+    F +TGAFEV+++ E VFS+LE  G+FP+   + + +++
Sbjct:    1 MQRNFIELQKFLEYSYPELV--GNVQGTFYPPPPFALALANLGTLALWGGIALTFLGETLFRAVGLAAPPGWFQSMKANPMPVVGGLFALNAVAGGFAKTGAFEVYLNGETVFSKLES-GRFPNAEDIYAGMKR 131          
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: A0A7S2V5G7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.540e-22
Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 0
Query:    1 MRRNFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGGIAITLGGSIIFDTLGVPQPFFVPPMRRNSIPTMIGLFFLNSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISALEKRRLRST 139
            M++NFEE++ FL   +P L    SI G+ YP P   + ++ +GS L +  +   +GGS +F  +G+P+P ++   + N +   IG+F +N   S   +TGAFEV++DD+L+FS+LE   KFPS   L   L +  LR T
Sbjct:  143 MKKNFEEMQQFLEYRYPQLV--GSIHGQNYPLPFHIKVISKIGSSLHLLSLVFLMGGSFVFQKMGIPEPSWLDWAKNNRMQVFIGIFGINYVTSNMAKTGAFEVFLDDDLIFSKLE-MNKFPSVQDLQVGLAQFGLRPT 278          
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: A0A482RX40_9ARCH (SelT/SelW/SelH family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX40_9ARCH)

HSP 1 Score: 84.0 bits (206), Expect = 5.550e-18
Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = 0
Query:    1 MRRNFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGGIAITLGGSIIFDTLGVPQPFFVPPMRRNSIPTMIGLFFLNSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISAL 131
            M + F++++ F+   +P +     + G LYPPP  A+  AT+  ++   GI + +GG  IF  LG+P+P FV  + RN   + + LF LN+     + TGAFE+++D+  VFS+L   G+ P+   ++ AL
Sbjct:    1 MSKYFQDVKRFVESKYPSV----HVSGGLYPPPIHARIFATIMGYVWTIGIVLIVGGQQIFKILGIPEPEFVSWIARNKGNSFLALFVLNTVSHSMLATGAFELYLDEAPVFSKLTY-GRVPTAEDILHAL 126          
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: B7G6P7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6P7_PHATC)

HSP 1 Score: 82.8 bits (203), Expect = 1.960e-17
Identity = 57/136 (41.91%), Postives = 78/136 (57.35%), Query Frame = 0
Query:    1 MRRNFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGGIA-ITLGGSIIFDTLGVPQ---PFFVPPMRRNSIPTMIGLFF-LNSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISAL 131
            M+RNF  ++ FL   FP L     I G  YPPPA  +  A L S +Q+ GI  I  GG  IF  LG PQ   P     + +N++P  I LF  L  +  ++ QTGAFEV+++D+ +FS+L  KG FP+   LIS+L
Sbjct:    1 MKRNFLNVQKFLEDQFPELR--GHITGANYPPPATIELAANLMSVIQLMGIFWIVAGGEKIFRFLGYPQNQLPSVYHTINQNAMPIGIFLFLILPQWIGRYTQTGAFEVYLNDKEIFSKLS-KGAFPTADDLISSL 133          
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: F0YLT9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLT9_AURAN)

HSP 1 Score: 78.6 bits (192), Expect = 1.970e-15
Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 0
Query:    2 RRNFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGGIAITLGGSIIFDTLGVPQPFFVPPMRRNSIPTMIGLFFLNSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISALEK 133
            +RN+ ELR FL   +P L    S+  E YPPPA     A      Q+  +A+ LGG  +F   G   P +   +  N +     ++  N+  +Q V TGAFE+ ++ EL FS+LE  G+ PS A ++  +++
Sbjct:   35 QRNYLELRKFLEDAYPGLR---SVAAEQYPPPAVGVFAAQAAGMAQVACVALLLGGEKVFQLFGAATPGWYHSVAENKMMAFGAVWMANNVAAQMVATGAFEIHVNGELAFSKLET-GRLPSAADVVRGMKR 162          
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: A0A6U3TNV0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TNV0_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.490e-15
Identity = 47/137 (34.31%), Postives = 72/137 (52.55%), Query Frame = 0
Query:    1 MRRNFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGGIAITLGGSIIFDTL----GVPQPFFVPPMRRNSIPTMIGLFFLNSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISALEK 133
            M+ NF  LR  L   FP   E   I G+ YP P +    AT+ S LQM  I + L G  +++ +      P  F+       ++  MI    + S+   F  TGAFE+++DD+L+FS+LE  G+ P+   +++ALEK
Sbjct:    1 MKANFLRLRELLRTEFP--GEWSEISGDNYPAPEWTNLAATVISILQMLVILVVLTGDAVWNYIPGFRSGPPEFYYKMKDNPALTFMIVFLVIPSYVQSFANTGAFEIFLDDKLIFSKLET-GRMPNVGEIMAALEK 134          
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: A0A7D4XC27_SCEQU (Selenoprotein T n=1 Tax=Scenedesmus quadricauda TaxID=3089 RepID=A0A7D4XC27_SCEQU)

HSP 1 Score: 74.3 bits (181), Expect = 1.360e-13
Identity = 40/107 (37.38%), Postives = 66/107 (61.68%), Query Frame = 0
Query:   27 GELYPPPAFAQNLATLGSFLQMGGIAITLGGSIIFDTLGVPQP-FFVPPMRRNSIPTMIGLFFL-NSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISAL 131
            G  YPPPA+   LA +   +QMG +   + G  +F+  GVP P +++  +  N   T +G++F+ N   +Q + TGAFEV+ D ELV+S+L++ G+ P+   L+SA+
Sbjct:   83 GTQYPPPAWKAGLAQVLGMVQMGALGGVVLGEKVFEAAGVPVPQWYLDNVAANRFGTGVGVWFVGNMITNQLISTGAFEVYYDGELVWSKLQQ-GRMPTAPELLSAM 188          
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Match: A0A1V9YGR5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGR5_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.040e-13
Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 0
Query:    4 NFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGGIAITLGGSIIFDTLGVP--QPFFVPPMRRNSIPTMIGLFFLNSFCSQFVQTGAFEVWIDDELVFSRLEEKGKFPSGAVLISALEKRRLR 137
            N+ E+  +L  ++P L     I G    PPA+ Q LA+   ++QM G A+ L G  I   LG+P   P FV  MR N      G+  L S     + TGAFEV+ +D+L++S++    ++P+ + L+   +   LR
Sbjct:  156 NYREVSRYLEANYPHLI--GRISGANALPPAWKQQLASFLGYVQMAGFALLLAGEHILGALGLPLDMPLFVQ-MRENKFAAFAGIMILGSISQSMLATGAFEVYFNDDLIYSKIR-MNRWPTMSELLELFQAAGLR 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11128.927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G767_ECTSI6.510e-5765.96Selenoprotein T n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A7S2D3C0_9STRA3.110e-2842.54Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6S9L5H0_HETAK5.220e-2440.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V5G7_9STRA1.540e-2238.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482RX40_9ARCH5.550e-1834.35SelT/SelW/SelH family protein n=1 Tax=archaeon Tax... [more]
B7G6P7_PHATC1.960e-1741.91Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
F0YLT9_AURAN1.970e-1533.33Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6U3TNV0_9STRA6.490e-1534.31Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7D4XC27_SCEQU1.360e-1337.38Selenoprotein T n=1 Tax=Scenedesmus quadricauda Ta... [more]
A0A1V9YGR5_9STRA6.040e-1333.09Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..144
NoneNo IPR availableGENE3D3.40.30.10coord: 89..135
e-value: 2.5E-7
score: 32.6
IPR011893Selenoprotein, Rdx-typeTIGRFAMTIGR02174TIGR02174coord: 2..132
e-value: 1.4E-10
score: 39.3
IPR011893Selenoprotein, Rdx-typePFAMPF10262Rdxcoord: 3..130
e-value: 1.2E-7
score: 31.8
IPR019389Selenoprotein TPANTHERPTHR13544SELENOPROTEIN Tcoord: 1..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11128contigH-elongata_contig11128:7417..7851 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11128.927.1mRNA_H-elongata_contig11128.927.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11128 6825..8746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11128.927.1 ID=prot_H-elongata_contig11128.927.1|Name=mRNA_H-elongata_contig11128.927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
MRRNFEELRSFLHLHFPVLAEADSIRGELYPPPAFAQNLATLGSFLQMGG
IAITLGGSIIFDTLGVPQPFFVPPMRRNSIPTMIGLFFLNSFCSQFVQTG
AFEVWIDDELVFSRLEEKGKFPSGAVLISALEKRRLRSTKNLNQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011893Selenoprotein_Rdx-typ
IPR019389Selenoprotein_T