prot_H-elongata_contig111257.923.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig111257.923.1
Unique Nameprot_H-elongata_contig111257.923.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: D7FVX8_ECTSI (Ubiquinol cytochrome c reductase cytochrome c1 prec (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVX8_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 7.170e-27
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAAR 64
            CHSIKF+AFRNLIGVS+SEA+VKKIAAE+EVEDGPN +GEMFERPAKPSD IP  YK EA+AR
Sbjct:   81 CHSIKFVAFRNLIGVSHSEAEVKKIAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEASAR 143          
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: A0A6J0BNX1_NEOLC (cytochrome c1, heme protein, mitochondrial-like n=3 Tax=Diprioninae TaxID=410274 RepID=A0A6J0BNX1_NEOLC)

HSP 1 Score: 87.8 bits (216), Expect = 4.460e-19
Identity = 38/63 (60.32%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAAR 64
            CHS+K++AFR LIGV+++EA+VK++AAEYE++DGPN +GE + RP KPSD +P+ Y  E AAR
Sbjct:  105 CHSLKYVAFRELIGVTHTEAEVKEMAAEYEIKDGPNDQGEYYMRPGKPSDYVPSPYPNEEAAR 167          
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: A0A2E4GUG0_9PROT (Cytochrome c1 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E4GUG0_9PROT)

HSP 1 Score: 82.8 bits (203), Expect = 2.130e-17
Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAAR 64
            CH ++F+AFRNL+ +  SE +VK +AAEYEV DGPN +GEMFERPA+PSD  PN +    AAR
Sbjct:   65 CHGLRFVAFRNLMQLGYSENQVKALAAEYEVTDGPNDEGEMFERPARPSDRFPNPFPNNNAAR 127          
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: UPI001F2AB500 (cytochrome c1 n=1 Tax=Candidatus Bandiella numerosa TaxID=2570586 RepID=UPI001F2AB500)

HSP 1 Score: 82.4 bits (202), Expect = 2.540e-17
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAAR 64
            CHSIK  AFRNL+ +  SE +VK +A+EYEV+DGPN +GEMFERPA+ SD+IP  Y  E AAR
Sbjct:   65 CHSIKRAAFRNLMEIGFSEEEVKALASEYEVKDGPNDEGEMFERPARLSDIIPGPYPNEKAAR 127          
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: A0A507FSB3_9FUNG (Cytochrome c domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FSB3_9FUNG)

HSP 1 Score: 83.2 bits (204), Expect = 2.750e-17
Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAAR 64
            CHS+  I++RNL+GVS++EA+VK++AAEYE EDGPN +GEMF+RP K SD  P  Y  E AAR
Sbjct:  113 CHSMSLISWRNLVGVSHTEAEVKEMAAEYEYEDGPNDQGEMFKRPGKLSDRFPVAYPNEEAAR 175          
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: A0A2E2T611_9PROT (Cytochrome c1 n=3 Tax=Thalassospira TaxID=168934 RepID=A0A2E2T611_9PROT)

HSP 1 Score: 80.9 bits (198), Expect = 9.630e-17
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAA 63
            CHS++FIAFRNL G+  +E ++K IAA+YE+EDGPN  G+MF RP KPSD  P+ +  E AA
Sbjct:   65 CHSLRFIAFRNLQGIGFNEDQIKAIAADYEIEDGPNDDGDMFTRPGKPSDYFPSPFANEKAA 126          
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: A0A2D8TRX0_9PROT (Cytochrome c1 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D8TRX0_9PROT)

HSP 1 Score: 80.5 bits (197), Expect = 1.310e-16
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAAR 64
            CH + +IAFRNL  +  +EA++K IAAEYEV DGP+ +GEMF RPA+P+D+IPN Y+ +  AR
Sbjct:   65 CHGLDYIAFRNLADLGYNEAEIKAIAAEYEVMDGPDDEGEMFMRPARPADIIPNPYRNDNEAR 127          
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: A0A139AWJ5_GONPJ (Cytochrome c domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AWJ5_GONPJ)

HSP 1 Score: 80.9 bits (198), Expect = 1.820e-16
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAAR 64
            CHS++ IAFRNLIGVS++EA+ K IAAE+E  DGPN  GEMF+RP K SD +P  Y  E A+R
Sbjct:  108 CHSLERIAFRNLIGVSHTEAEAKAIAAEFEYTDGPNDTGEMFQRPGKLSDYMPKPYPNEEASR 170          
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: A0A507BXV6_9FUNG (Cytochrome c domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BXV6_9FUNG)

HSP 1 Score: 81.3 bits (199), Expect = 2.150e-16
Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAAR 64
            CHS++ +A+RNLIGV+++EA++K ++AEYE  DGPN  GEMF RP KPSD +P  Y  E AAR
Sbjct:  165 CHSLERVAWRNLIGVTHTEAEIKAMSAEYEYADGPNDAGEMFMRPGKPSDYMPKPYPNEEAAR 227          
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Match: A0A7S1TQH4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQH4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.040e-16
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    2 CHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPSDLIPNLYKIEAAAR 64
            CHS++ IAFRNL+ V  SE + KK+A  YE+EDGPN +GEMFERP K SD IP  Y  E A R
Sbjct:   69 CHSVEGIAFRNLVNVIFSEKQAKKLAESYEIEDGPNDEGEMFERPGKLSDYIPGPYANEEAGR 131          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111257.923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVX8_ECTSI7.170e-2782.54Ubiquinol cytochrome c reductase cytochrome c1 pre... [more]
A0A6J0BNX1_NEOLC4.460e-1960.32cytochrome c1, heme protein, mitochondrial-like n=... [more]
A0A2E4GUG0_9PROT2.130e-1760.32Cytochrome c1 n=2 Tax=Alphaproteobacteria TaxID=28... [more]
UPI001F2AB5002.540e-1763.49cytochrome c1 n=1 Tax=Candidatus Bandiella numeros... [more]
A0A507FSB3_9FUNG2.750e-1761.90Cytochrome c domain-containing protein n=2 Tax=Chy... [more]
A0A2E2T611_9PROT9.630e-1758.06Cytochrome c1 n=3 Tax=Thalassospira TaxID=168934 R... [more]
A0A2D8TRX0_9PROT1.310e-1657.14Cytochrome c1 n=3 Tax=Alphaproteobacteria TaxID=28... [more]
A0A139AWJ5_GONPJ1.820e-1661.90Cytochrome c domain-containing protein n=1 Tax=Gon... [more]
A0A507BXV6_9FUNG2.150e-1658.73Cytochrome c domain-containing protein n=1 Tax=Syn... [more]
A0A7S1TQH4_9STRA3.040e-1660.32Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002326Cytochrome c1PFAMPF02167Cytochrom_C1coord: 2..68
e-value: 7.8E-18
score: 65.0
IPR002326Cytochrome c1PANTHERPTHR10266CYTOCHROME C1coord: 2..64
IPR036909Cytochrome c-like domain superfamilyGENE3D1.10.760.10coord: 1..74
e-value: 3.4E-18
score: 68.4
IPR036909Cytochrome c-like domain superfamilySUPERFAMILY46626Cytochrome ccoord: 2..63
NoneNo IPR availablePANTHERPTHR10266:SF3CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIALcoord: 2..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111257contigH-elongata_contig111257:1757..1987 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111257.923.1mRNA_H-elongata_contig111257.923.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig111257 1383..2155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig111257.923.1 ID=prot_H-elongata_contig111257.923.1|Name=mRNA_H-elongata_contig111257.923.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
MCHSIKFIAFRNLIGVSNSEAKVKKIAAEYEVEDGPNGKGEMFERPAKPS
DLIPNLYKIEAAARGRTTEPARPTCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002326Cyt_c1
IPR036909Cyt_c-like_dom_sf