prot_H-elongata_contig111016.906.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: D7G6X0_ECTSI (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X0_ECTSI) HSP 1 Score: 192 bits (489), Expect = 4.390e-61 Identity = 90/103 (87.38%), Postives = 94/103 (91.26%), Query Frame = 0
Query: 1 MEFPGEAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQGVDPREGLKNLTGLEFMLQADLPEEMSFLPPGQPAPVGPQPRRLFVIKVQ 103
M+FPG AEDP +SFIDPVWLQQWGLGPENALDYFALSPFYDK+CNNEQCRMQGVDPREGL NLTGLEFML +LP EMSFLPPGQPAP GPQPRRLFVIK Q
Sbjct: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFML-VELPPEMSFLPPGQPAPAGPQPRRLFVIKKQ 102
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: A0A6H5KKW4_9PHAE (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW4_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.590e-58 Identity = 89/103 (86.41%), Postives = 93/103 (90.29%), Query Frame = 0
Query: 1 MEFPGEAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQGVDPREGLKNLTGLEFMLQADLPEEMSFLPPGQPAPVGPQPRRLFVIKVQ 103
MEFPG AEDP +SFIDPVWLQQWGLGP+NALDYFALSPFYDK+CNNEQCRMQ VDPREGL NLTGLEFML +LP EMSFLPPGQPAP GPQPRRLFVIK Q
Sbjct: 1 MEFPGAAEDPEQRSFIDPVWLQQWGLGPQNALDYFALSPFYDKACNNEQCRMQSVDPREGLLNLTGLEFML-VELPPEMSFLPPGQPAPAGPQPRRLFVIKKQ 102
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: A0A835YVL9_9STRA (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL9_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 9.860e-22 Identity = 52/100 (52.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query: 6 EAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQGV-DPREGLKNLTGLEFMLQADLPEEMSFLP-PGQPAPVGPQPRRLFVIKVQ 103
E ED SF D +WL+ + LGPE A+DYFALSPFYD++ NNE CRMQG+ D ++ +TG+E++++ +LP E LP PG P PQPR L VIK Q
Sbjct: 14 EIEDQTQLSFQDTMWLRSFYLGPETAIDYFALSPFYDRTSNNELCRMQGLTDHVAAMQTMTGIEYVVE-ELPPETDELPEPGAP----PQPRHLMVIKKQ 108
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: M4C4K5_HYAAE (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4K5_HYAAE) HSP 1 Score: 79.7 bits (195), Expect = 9.520e-16 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 0
Query: 1 MEFPGEAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLQADLPEEMSFLPPGQPAPVGPQPRRLFVIKVQK 104
ME A+D Y SF D VWLQ + L P+ L YFALSPFYD+SCNNE+ +MQ G+D LKNL G+E+ L + +++ P++L+VI+ Q+
Sbjct: 1 MEVAAHADD-YNASFRDTVWLQSFPLNPQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGIEYELLPNAAKQL--------------PQQLYVIRKQR 88
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: A0A0N7L744_PLAHL (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L744_PLAHL) HSP 1 Score: 76.6 bits (187), Expect = 2.440e-15 Identity = 43/106 (40.57%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 1 MEFPGEAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLQADLPEEMSFLPPGQPAPVGPQPRRLFVIKVQK 104
ME G +D Y SF D VWLQ + L + L YFALSPFYD+SCNNE+ +MQ G+D LKNL G+E+ L + +++ P++L++I+ Q+
Sbjct: 1 MEVAGHVDD-YNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGVEYELLPNAAKQL--------------PQQLYIIRKQR 88
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: D0NQQ4_PHYIT (Mediator of RNA polymerase II transcription subunit 6 n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0NQQ4_PHYIT) HSP 1 Score: 76.6 bits (187), Expect = 1.130e-14 Identity = 44/106 (41.51%), Postives = 61/106 (57.55%), Query Frame = 0
Query: 1 MEFPGEAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLQADLPEEMSFLPPGQPAPVGPQPRRLFVIKVQK 104
ME +D Y SF D VWLQ + L + L YFALSPFYD+SCNNE+ +MQ G+D LKNL G+E+ L + ++M P++LF+I+ Q+
Sbjct: 1 MEVSAHVDD-YNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGVEYELLPNTAKQM--------------PQQLFIIRKQR 88
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: A0A3F2RNL5_9STRA (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RNL5_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.250e-14 Identity = 43/106 (40.57%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 1 MEFPGEAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLQADLPEEMSFLPPGQPAPVGPQPRRLFVIKVQK 104
ME +D Y SF D VWLQ + L + L YFALSPFYD+SCNNE+ +MQ G+D LKNL G+E+ L ++ +++ P++LF+I+ Q+
Sbjct: 1 MEVSSHVDD-YNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGIEYELLSNAAKQL--------------PQQLFIIRKQR 88
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: A0A484EGT8_BRELC (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGT8_BRELC) HSP 1 Score: 74.7 bits (182), Expect = 1.990e-14 Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 0
Query: 1 MEFPGEAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQGVDPREGLKNLTGLEFMLQADLPEEMSFLPPGQPAPVGPQPRRLFVIKVQK 104
ME +D Y SF D VWLQ + L + L YFALSPFYD+SCNNE+ +MQ + E LKNL G+E+ L + +++ P++L++I+ Q+
Sbjct: 1 MEVVAHVDD-YNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLG-LEQLKNLRGVEYELLPNAAKQL--------------PQQLYIIRKQR 88
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: A0A2D4BKI9_PYTIN (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKI9_PYTIN) HSP 1 Score: 75.5 bits (184), Expect = 3.720e-14 Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 1 MEFPGEAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLQADLPEEMSFLPPGQPAPVGPQPRRLFVIKVQK 104
ME +D Y SF D VWLQ + L + L YFALSPFYD+SCNNE+ +MQ G+D LKN+ G+E+ L +L +++ P++LF+++ Q+
Sbjct: 1 MEVVSHVDD-YNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNMRGIEYELXPNLAKQL--------------PQQLFLVQKQR 88
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Match: A0A662X429_9STRA (Mediator of RNA polymerase II transcription subunit 6 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X429_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.130e-13 Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = 0
Query: 1 MEFPGEAEDPYTKSFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLQADLPEEMSFLPPGQPAPVGPQPRRLFVIKVQK 104
ME A+D Y SF D VWLQ + L + L YFALSPFYD+SCNNE+ +MQ G+D LKNL G+E+ L LP LP ++LF+I+ Q+
Sbjct: 1 MEVVAHADD-YNASFRDTVWLQSFPLTAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGIEYEL---LPNGAKQLP-----------QQLFLIRKQR 88 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111016.906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig111016.906.1 ID=prot_H-elongata_contig111016.906.1|Name=mRNA_H-elongata_contig111016.906.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bpback to top |