prot_H-elongata_contig111007.905.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig111007.905.1
Unique Name	prot_H-elongata_contig111007.905.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	185

Homology

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BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A8F0FAP0_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP0_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 2.600e-123
Identity = 174/184 (94.57%), Postives = 179/184 (97.28%), Query Frame = 0

Query:    1 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            M NLKKSL+IFFVTLSLPLIAFADVAGLTKCS+S AFNKRLESSVKKLELRVQKYE GSPPALALEQQI RTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYL+TVSNTS PTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSG+FLA+DSEITVSPR
Sbjct:    1 MRNLKKSLLIFFVTLSLPLIAFADVAGLTKCSESAAFNKRLESSVKKLELRVQKYEAGSPPALALEQQISRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLNTVSNTSNPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGNFLASDSEITVSPR 184

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BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: D1J7A8_ECTSI (Photosystem I reaction center subunit III n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7A8_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 9.530e-113
Identity = 161/184 (87.50%), Postives = 171/184 (92.93%), Query Frame = 0

Query:    1 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            M  +KKSL+IFF+TLSLPL +FADVAGLTKCS+SVAFNKRLE SVKKLE RVQKYE  SPPALALEQQI RTKQRF+RYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYI+GWIGWVGR YL+TVSNT+ PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG FLA DSEITVSPR
Sbjct:   34 MFKIKKSLLIFFLTLSLPLASFADVAGLTKCSESVAFNKRLELSVKKLEGRVQKYEPNSPPALALEQQINRTKQRFNRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSNTTNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLAPDSEITVSPR 217

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BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A8F0JXW8_9PHAE (Photosystem I reaction center subunit III n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JXW8_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 1.010e-111
Identity = 156/184 (84.78%), Postives = 168/184 (91.30%), Query Frame = 0

Query:    1 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            M NLKKS +IFF+ LS+PL AFADVAGLTKCS+S  FNKRLE+SVKKLE RVQKYE GSPPALALEQQI RTKQRFDRYS SELLCGKEGLPHLITDGRWDH+VEF+IPG+MFLYISGWIGWVGR YL+TVS TS PTEKEIIIDVPLALKIMS+GF+WP SAWQEFT G+FLA DSEITVSPR
Sbjct:    1 MFNLKKSFLIFFLALSIPLTAFADVAGLTKCSESAPFNKRLEASVKKLESRVQKYEVGSPPALALEQQINRTKQRFDRYSKSELLCGKEGLPHLITDGRWDHSVEFVIPGLMFLYISGWIGWVGRSYLNTVSKTSNPTEKEIIIDVPLALKIMSSGFVWPVSAWQEFTGGNFLAPDSEITVSPR 184

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BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A6B7ILH5_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7ILH5_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 9.630e-110
Identity = 152/184 (82.61%), Postives = 167/184 (90.76%), Query Frame = 0

Query:    1 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            M   KKSL+IF +  SLPL+ FADVAGLTKCS+S  FNKRL++SVKKLE R+QKYE GSPPALALEQQI RTKQRFDRYSNSELLCGK+GLPHLITDGRWDHAVEFMIPGMMFLYI+GWIGWVGR YL+T+S +S PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG+FLA DS+ITVSPR
Sbjct:    1 MFKFKKSLLIFVLVFSLPLVTFADVAGLTKCSESTTFNKRLDASVKKLEGRIQKYEAGSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRNYLNTISGSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLAPDSDITVSPR 184

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BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A141BSG7_9PHAE (Photosystem I reaction center subunit III n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSG7_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 4.900e-108
Identity = 149/182 (81.87%), Postives = 168/182 (92.31%), Query Frame = 0

Query:    3 NLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            +LKKSL+I F+TLSLPL  FADVAGLTKCS+S AFN RLESSV+KLE R++KYETGSPPALALEQQI RTKQRF+RYSNSELLCGK+GLPHLITDGRWDHAVEF+IPG+MF+YISGWIGWVGR Y++ +S TS PTEKEIIIDVPLA+KIMS+GF+WP SAWQEF SG FLA+DSEITVSPR
Sbjct:    5 SLKKSLLIVFLTLSLPLTVFADVAGLTKCSESSAFNNRLESSVRKLESRIKKYETGSPPALALEQQINRTKQRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFIIPGIMFIYISGWIGWVGRSYINNISTTSNPTEKEIIIDVPLAIKIMSSGFVWPISAWQEFASGSFLASDSEITVSPR 186

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BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A0S0GAQ3_COSCS (Photosystem I reaction center subunit III n=29 Tax=Laminariales TaxID=2886 RepID=A0A0S0GAQ3_COSCS)

HSP 1 Score: 316 bits (809), Expect = 6.030e-108
Identity = 151/184 (82.07%), Postives = 166/184 (90.22%), Query Frame = 0

Query:    1 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            M N KKS++IFF+ LS+PL AFADVAGLTKCS+S  FNKR ++SVKKLE+RV+KYE GSPPALALEQQI RTKQRF RYSNSELLCGKEGLPHLITDGRWDHAVEF+IPGMMFLYISGWIGW GR YL+TV  TS PTEKEII+DVPLALKIMS+GFIWP SAWQEFT+G+FL  DSEITVSPR
Sbjct:   19 MFNFKKSVLIFFLALSIPLAAFADVAGLTKCSESAPFNKRFDASVKKLEVRVKKYEPGSPPALALEQQITRTKQRFTRYSNSELLCGKEGLPHLITDGRWDHAVEFVIPGMMFLYISGWIGWAGRSYLNTVGATSNPTEKEIILDVPLALKIMSSGFIWPVSAWQEFTTGNFLVPDSEITVSPR 202

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BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A344PFC1_9PHAE (Photosystem I reaction center subunit III n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PFC1_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 1.360e-107
Identity = 154/184 (83.70%), Postives = 166/184 (90.22%), Query Frame = 0

Query:    1 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            M   KKSL+IFF+ LSLPL +FADVAGLTKCSDS AF KRL+SSVKKLE R++KYE  SPPALALEQQI RTKQRFDRYSNS+LLCGK+GLPHLITDGRW+HAVEF+IPGMMFLYISGWIGWVGR YL+TVS  S PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG FLA DSEITVSPR
Sbjct:    2 MFKFKKSLLIFFLALSLPLASFADVAGLTKCSDSSAFTKRLDSSVKKLEGRIKKYEPNSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFVIPGMMFLYISGWIGWVGRSYLNTVSVFSNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLAPDSEITVSPR 185

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BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A1I9LVT8_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT8_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 4.970e-106
Identity = 153/185 (82.70%), Postives = 165/185 (89.19%), Query Frame = 0

Query:    1 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTS-KPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            M   KKSL+IFF+TLSLP I+FADVAGLTKCSDS  FNKRLESSVKKLE R++KYE  SPPAL L++QI  TK+RFDRYSNSELLCGK+GLPHLITDGRWDHAVEFMIPG+MFLYISGWIGWVGR YL+TVS TS  PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG FL  DSEITVSPR
Sbjct:   34 MFKFKKSLLIFFLTLSLPFISFADVAGLTKCSDSSPFNKRLESSVKKLETRIKKYEPNSPPALVLQEQIRTTKKRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGIMFLYISGWIGWVGRSYLNTVSKTSLNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLTPDSEITVSPR 218

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BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A2R4QPX5_9PHAE (Photosystem I reaction center subunit III n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPX5_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 6.670e-106
Identity = 147/182 (80.77%), Postives = 163/182 (89.56%), Query Frame = 0

Query:    3 NLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            +LKK L++  +T SLP   FAD+AGLTKCSDS  FN RL+SSVKKLE RV+KYE GSPPALALEQQI RTKQRF+RYSNSELLCGK+GLPHLITDGRWDHAVEF+IPG+MF+YISGWIGWVGR Y++ VSNT  PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG FLA+DSEITVSPR
Sbjct:    5 HLKKLLLVILITFSLPSTIFADIAGLTKCSDSSTFNNRLDSSVKKLESRVKKYEAGSPPALALEQQISRTKQRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFVIPGLMFIYISGWIGWVGRSYINNVSNTKNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGSFLASDSEITVSPR 186

[Close]

BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A8F0F743_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F743_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 3.010e-105
Identity = 144/184 (78.26%), Postives = 165/184 (89.67%), Query Frame = 0

Query:    1 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 184
            M  L+KSL+ FF+  +LPL A+ADVAGLTKCSDS AFNKR + SVKKLE R+QKYE GSPP LALEQQI RTK RF+RYSNSELLCGK+GLPHLITDGRWDHAVEF+IPG+MF+YISGWIGWVGRKY++T+  +  PTEKEIIIDVPLA+KIMS+GFIWP SAWQEFT+G+FLA+DSEITVSPR
Sbjct:    6 MFTLRKSLLFFFLAFTLPLNAYADVAGLTKCSDSAAFNKRFDGSVKKLETRIQKYEPGSPPTLALEQQIERTKNRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFIIPGIMFIYISGWIGWVGRKYINTIGTSKNPTEKEIIIDVPLAVKIMSSGFIWPISAWQEFTTGNFLASDSEITVSPR 189

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot

BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8F0FAP0_9PHAE	2.600e-123	94.57	Photosystem I reaction center subunit III n=1 Tax=...	[more]
D1J7A8_ECTSI	9.530e-113	87.50	Photosystem I reaction center subunit III n=2 Tax=...	[more]
A0A8F0JXW8_9PHAE	1.010e-111	84.78	Photosystem I reaction center subunit III n=2 Tax=...	[more]
A0A6B7ILH5_9PHAE	9.630e-110	82.61	Photosystem I reaction center subunit III n=1 Tax=...	[more]
A0A141BSG7_9PHAE	4.900e-108	81.87	Photosystem I reaction center subunit III n=15 Tax...	[more]
A0A0S0GAQ3_COSCS	6.030e-108	82.07	Photosystem I reaction center subunit III n=29 Tax...	[more]
A0A344PFC1_9PHAE	1.360e-107	83.70	Photosystem I reaction center subunit III n=5 Tax=...	[more]
A0A1I9LVT8_9PHAE	4.970e-106	82.70	Photosystem I reaction center subunit III n=1 Tax=...	[more]
A0A2R4QPX5_9PHAE	6.670e-106	80.77	Photosystem I reaction center subunit III n=3 Tax=...	[more]
A0A8F0F743_9PHAE	3.010e-105	78.26	Photosystem I reaction center subunit III n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..58
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..184
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..23
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.849
None	No IPR available	TMHMM	TMhelix		coord: 102..124
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR003666	Photosystem I PsaF, reaction centre subunit III	PFAM	PF02507	PSI_PsaF	coord: 9..175 e-value: 4.8E-81 score: 270.7
IPR003666	Photosystem I PsaF, reaction centre subunit III	PANTHER	PTHR34939	FAMILY NOT NAMED	coord: 4..181
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	GENE3D	1.10.8.110		coord: 24..177 e-value: 2.2E-67 score: 227.5
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	SUPERFAMILY	81536	Subunit III of photosystem I reaction centre, PsaF	coord: 24..184

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig111007	contig	H-elongata_contig111007:1530..2084 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig111007.905.1	mRNA_H-elongata_contig111007.905.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig111007 1425..2084 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig111007.905.1 ID=prot_H-elongata_contig111007.905.1|Name=mRNA_H-elongata_contig111007.905.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp
MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLEL
RVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRW
DHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLAL
KIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003666	PSI_PsaF
IPR036577	PSI_PsaF_sf