prot_H-elongata_contig1110.902.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1110.902.1
Unique Nameprot_H-elongata_contig1110.902.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length539
Homology
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A6H5K089_9PHAE (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K089_9PHAE)

HSP 1 Score: 444 bits (1143), Expect = 1.100e-147
Identity = 236/381 (61.94%), Postives = 279/381 (73.23%), Query Frame = 0
Query:  145 VRPEDHNAPIDWLLSRRLPIMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTISVD-------NMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMVQKNQAEEGD---LATARNLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGDPGFDSVVNASLYRRSSGKTAAVVMSQAADFGAKNAQTRVRNVATTGGLSLCRADVTNGRMHQVRVHLKWKLCPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDMWQTAKVILRASGTPEQRQEFEELQELQW----KTAPIGGRGAPRYLKNG 511
            V  ED+ APIDW+LSRRLP  SRRFYR+ALE G VKVDGR VKRF+RV RG+ ISVD                           + +FPQRLP LRV++ED H  VV+KPAGM+CQPC AA  GTVLHGL++HMVQ  Q +EG     A A  LSQGIVQRLDK TSG+MVVAK L A+SK S+L   G +K+QY+A+CHGDPGFDSVV+A LYRRSSGK  AV   +A +F AK AQTRVRNVAT  GLSLCRAD+  GRMHQVRVHLKW  CP+VGD++YGD EAN RV+KR   R + +RPLLHS++LEF HPFTN+PM F+APMPPDMW+TA+ ILR SGTPEQ++ F +LQEL+     + AP+GGRGAPR    G
Sbjct:  137 VSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQXXXXXXXXXXXXXXXXXXXXXXXSLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMYHMVQSGQLKEGADTMAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEVQRPLLHSVSLEFIHPFTNKPMSFKAPMPPDMWETAQNILRMSGTPEQQEAFGKLQELRQSQADEAAPVGGRGAPRMAAGG 517          
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A835YI41_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI41_9STRA)

HSP 1 Score: 221 bits (562), Expect = 3.810e-62
Identity = 143/374 (38.24%), Postives = 199/374 (53.21%), Query Frame = 0
Query:  143 LNVRPEDHNAPIDWLLSRRLPIMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTISVDNMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMVQKNQAEEGDLATARNLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHG------------DPGFDSV----VNASLYRRSSGKTAAVVMSQ----------AADFGAKNAQTRVRNVATT-------------GGLSLCRADVTNGRMHQVRVHLKWKLCPVVGDKDY---GDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDMWQTAKVIL 474
            + V  ED NAPIDWLLSR+LP  SRRF+R+ L  G+V++DGR  KR VRV  G TI+V      AA A D     + P +   P +  +L V+YED H  VV KP G+V QP  +   GT+L+G+LHHMV + +   GD   A+ L QG+V RLD+ TSG+++VAKNL A+S  S++     + + Y+A+  G            D G D      ++A LY+R+SGK A     Q          A+    K A TRV+ +  +             GGL   + ++T GR HQ+R HL     PV+GD  Y   GD+ A R  A      +   RPLLH+++L   HP TN  +   AP+P DMW+    ++
Sbjct:    8 ITVEQEDGNAPIDWLLSRKLPHRSRRFFRKQLADGNVQIDGRVNKRLVRVRPGQTITV------AAAAADA----VAPPSEQLPAQDLKLHVVYEDEHIIVVAKPPGIVVQPMASQPRGTLLNGVLHHMVARGECAAGDEVAAQGLLQGVVHRLDRDTSGIVIVAKNLEASSTLSAMFKSRKVSKTYLAVTAGLPNPARCALEPADSGGDGTGPYTIDAPLYKRASGKMAVATPQQLQXXXXXXXXASAIDVKPALTRVKALPRSAAXXXXXXXXXXXGGLRALQVEITTGRQHQIRAHLLHAGAPVIGDVTYCAGGDAGAARAAAAA----LGVARPLLHALSLTLHHPVTNARLVLVAPLPADMWRVLSDVV 367          
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A7S3XRN0_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRN0_HETAK)

HSP 1 Score: 190 bits (483), Expect = 1.230e-51
Identity = 117/329 (35.56%), Postives = 181/329 (55.02%), Query Frame = 0
Query:  145 VRPEDHNAPIDWLLSRRLPIMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTIS--VDNMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMVQKNQAEEGDLATARNLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGDPGFDSVVNASLYRRSSGKTAAVVMSQ----AADFGAKNAQTRVRNVATTGGLSLCRADVTNGRMHQVRVHLKWKLCPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDMW 467
            V  E++ AP+DW L+   P  SRR++R+ ++ G VKV+G+TV+RF ++  G  +   +++ +    GA + +                 L VL+ED     V+KPAG+VC P ++  SGTVL+GLLHH ++  Q    +  +   LS+GIV RLDK TSGVM+ AKN  AA K S   +     ++Y+ +C+G     +VV   +YR  +GK A +   Q     ++   K++++ V+ +    GLSL   ++  GRMHQ R+HLK+   P++GD  YG +  N+   +  +  VD  R LLH+  L   HP T   +   AP+P DMW
Sbjct:   62 VDSENNGAPLDWYLAHSFPQKSRRYFRKKIQDGEVKVNGKTVRRFAKLRTGQVLDLEIEDFAKEIEGAENLS-----------------LSVLFEDDDLVAVLKPAGVVCYPVDSQKSGTVLNGLLHHFLETEQQVFAN--SIETLSKGIVHRLDKDTSGVMIFAKNQKAAKKLSQSFESRETVKRYLGVCYGHVEPKTVVEEPVYRTKNGKMAVLSKKQDTSVISESRVKDSKSVVKCLMHRQGLSLVEVELITGRMHQARLHLKYLGAPILGDPIYGLARVNKDAYQ--DLGVD--RALLHASRLIVQHPRTGEKLDLSAPVPSDMW 367          
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A7S2USK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK5_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.140e-45
Identity = 138/395 (34.94%), Postives = 190/395 (48.10%), Query Frame = 0
Query:  145 VRPEDHNAPIDWLLSRRLPIMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTISVDNMSSVAAGARDRAGAPITPTNYLFPQRLPE---LRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMV------------------QKNQAEEGDLA------------------------TAR---NLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGD--PGFDSVVNASLYRRSSGKTAAVVMSQ-------------AADF---------GAKNAQTRVRNVATTGGLSLCRADVTNGRMHQVRVHLKWKL-CPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDM 466
            V  +D + P+D +L+R+ P  SRRF+R+ ++ G VKVD + VKR  ++ +G  +S                A   P     P   PE   L VL+ED H   V KP GM+  P E+  +GTVLHG+LH +                   Q+N  EE                            TAR    L+QG+V RLD  TSGV++VAKN  AA   +      ++K++Y+A+  GD  PG   +    L R SSGK A    +Q               DF         GA+ A T VR +AT G LS+  A++  GRMHQ+RVHL  +  CPV+GD  YGD++ NRR  +  N +V   R LLH+ +LEFTHP T + +    P+P DM
Sbjct:   57 VGKKDDDWPLDIVLTRQYPEKSRRFFRKIIQAGRVKVDEKEVKRLSKIRKGQLVS----------------AQFKPDEK--PSMEPEDLGLEVLFEDEHLIAVAKPPGMIVHPVESCETGTVLHGVLHLLTTPREKVTPKETAAQPEGNQENAQEEDTKVERKPEKNAKKGGPDPWDPAKPLKLTARLCTGLAQGVVHRLDSDTSGVVLVAKNAPAARGMAKQFQQRSVKKKYMAVVVGDLGPGVHHLT-LPLLRTSSGKMAVFQEAQPEWGEEMAGGDMLTGDFTDVGEADAKGARGATTIVRRLATDGQLSVVGAEILTGRMHQLRVHLAQEANCPVLGDPVYGDTDWNRRAKRSENLQVS--RTLLHAHSLEFTHPITGKHVSLSTPVPLDM 430          
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 168 bits (426), Expect = 2.770e-43
Identity = 113/326 (34.66%), Postives = 164/326 (50.31%), Query Frame = 0
Query:  148 EDHNAP-IDWLLSRRLPIMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTISVDNMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMVQKNQ----AEEGDLATARNLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGDPGFDSVVNASLYRRSSGKTAAVVMSQAADFGAK--NAQTRVRNVATTGGLSLCRADVTNGRMHQVRVHLKWKLCPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDM 466
            E++N   +D  LS   P  SR ++    ++G V+V GR VK+  ++  G  +SV  + +    A               P+ +P L +LYED H   V KP GMV  P   + SGT  + L  HM  + +    A  GD      L  GIV RLDK TSGV++ +KN    +K S +     IK+ Y+A+C G+PG D  +   + R    +    V+ +  +  A+   A T V  ++    LSL R  +  GR HQ+RVHL  +  PV+GD+ YG+ + NRR  KR   +    RPLLH+  LE  HP T  P+  +AP+P DM
Sbjct:   73 EEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAE--------------PEDIP-LDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDYRAAGGGDA-----LRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQ----RPLLHAYQLELDHPITGEPLSLKAPVPEDM 374          
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A6M1ZVU5_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZVU5_9BACT)

HSP 1 Score: 157 bits (398), Expect = 2.200e-40
Identity = 107/331 (32.33%), Postives = 169/331 (51.06%), Query Frame = 0
Query:  145 VRPEDHNAPIDWLLSRRLPIMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTISVDNMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMVQKNQAEEGDLATARNLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGDPGFDSVVNASLYRRSSGKTAAVVMSQAADFGAKNAQTRVRNVATTGGLSLCRADVTNGRMHQVRVHLKWKLCPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDMWQTAKVILR 475
            V  E+    +D LL+ R P +SR ++++ ++R  V V+G+ VK+ + +     I +  +              ++P   L P+ +P L +LYED    V+ KPAG+V  P    SSGT+++GLL H  Q        L  A +L  GIV RLDK TSG++V AKN  A  K S+L  +  + ++Y+AIC  +PG + +++  + R    +    ++ +      + AQT   ++   G LSL R     GR HQ+RVHLK    P++GD  YG+   N++              LLH+  L F HP +   + F+AP+P DM +    I+R
Sbjct:    8 VTEEEEKLRLDTLLATRFPELSRTYFQQLIDRQLVLVNGKQVKKRIHLRSADEIEIQFV--------------LSPEISLEPEEIP-LDILYEDEELLVINKPAGLVVHPGAGHSSGTLVNGLLFHCKQ--------LKAAESLRPGIVHRLDKGTSGLLVAAKNEEAQMKLSTLFANRQVHKEYLAICISNPG-NRLIDQPIGRHPVRRKEMTILKERG----REAQTETHSLVHNGELSLVRLIPKTGRTHQLRVHLKSIRAPILGDPVYGNHYLNKKYGLTHQ--------LLHAEILRFVHPISGEKVEFKAPIPEDMQKIIDSIIR 302          
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.710e-40
Identity = 108/320 (33.75%), Postives = 165/320 (51.56%), Query Frame = 0
Query:  149 DHNAPIDWLLSRRLPIMSRRFYRRALERGSVKVDGRT-VKRFVRVARGSTISVDNMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMVQKNQAEEGDLATARNLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGDPGFDSVVNASLYRRSSGKTAAVVMSQAADFG-AKNAQTRVRNVATTGGLSLCRADVTNGRMHQVRVHLKWKLCPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDM 466
            D    ID  L  ++P  SR ++     +G V V+G + VK+  +V  G  ISV  +++                  L P+ +P L V++ED     + KP GMV  P     +GT ++ LLHH+ +        L  + +L  G+V RLDK TSGV++ AK      + S L  D  +++ Y+A+C G+PG D  ++  + R ++ +   V +        A+ A + VR  A  G LS+    +  GR HQ+RVHL+ +  P+VGD+ YG+ + NRR+ KRG  R     PLLH++ LEFTHP T   +   AP+P DM
Sbjct:   62 DAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLATAELN--------------LGPEDIP-LDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVS--LGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPG-DDAIDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRGISR-----PLLHALRLEFTHPTTGAALRLEAPLPEDM 358          
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A2V8LI45_9BACT (Pseudouridine synthase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8LI45_9BACT)

HSP 1 Score: 156 bits (394), Expect = 7.570e-40
Identity = 118/327 (36.09%), Postives = 173/327 (52.91%), Query Frame = 0
Query:  141 LVLNVRPEDHNAPIDWLLSRRLPIMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTISVDNMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMVQKNQAEEGDLATARNLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGDPGFDS-VVNASLYRRSSGKTAAVVMSQAADFGAKNAQTRVRNVATTGGLSLCRADVTNGRMHQVRVHLKWKLCPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDM 466
            + L   P+D    +D  L+R L  ++R   +     G+V ++GR  K   ++  G TI +D       GA + A  P+TP      ++LP L++ +ED   AVV KPAG+V  P      GT++HGLL H   +N ++ G     +N   GIV RLDK TSG+++VAKN  A ++ S    D  I++ Y+A+ HG P  DS  +  S+ R  S +T    M+ A + G ++A T  R V    G SL    +  GR HQ+RVHL     PVVGD  YG+ + N+ V K G       R  LH+ AL F HP T+ P+ F +P+P ++
Sbjct:    1 MKLQPGPDDRGLRLDVFLARHLENLTRSQIQLLNRSGAVLIEGRHDKAGYKIRGGETIEID------LGALEPA--PLTP------KQLP-LQIYFEDEDLAVVEKPAGVVVHPGSGTGGGTLVHGLLFHF--QNLSDMG----GKN-RPGIVHRLDKWTSGLIIVAKNNVAHARLSQAFQDRQIQKSYLALVHGRPRLDSGTIELSIGRHPSIRTK---MAAATEKG-RSAYTEYRVVEQFRGFSLVELKIKTGRTHQIRVHLSAIGHPVVGDDVYGERQYNQFVKKHGELN----RYFLHAAALGFNHPSTHVPLKFHSPLPEEL 297          
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A0H5E3K8_9BACT (Pseudouridine synthase n=1 Tax=Estrella lausannensis TaxID=483423 RepID=A0A0H5E3K8_9BACT)

HSP 1 Score: 150 bits (380), Expect = 1.300e-37
Identity = 100/306 (32.68%), Postives = 149/306 (48.69%), Query Frame = 0
Query:  164 IMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTISVDNMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMVQKNQAEEGDLATARNLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGDPG---FDSVVNASLYRRSSGKTAAVVMSQAADFGAKNAQTRVRNVATTGGLSLCRADVTNGRMHQVRVHLKWKLCPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDM 466
            + SR +++   + G V V+G  VK+  R   G  + V  +              +TP   L  + +P LR+LYED     + KP GMV  P     SGTV++ LL H  +  +  + +     ++  GIV RLDK TSGV++ AK+ +   K   L     + ++Y+A+C G+PG    D  +    Y R   K          D G K A T    +AT G +SL +  +  GR HQ+RVH++ K  PV+GD  YG    N++            R LLH+  L F HP T +P+ F+AP+PPD+
Sbjct:   35 VKSRTYFQYLFQEGKVSVNGLPVKKQYRPRTGDLVEVQFI--------------LTPELNLAAENIP-LRILYEDESLIAIDKPPGMVVHPAPGNWSGTVVNALLFHCTRLKEEFQQE-----HIRPGIVHRLDKETSGVLLAAKSHSMHGKLVDLFSSRQVYKEYLAVCLGNPGRGIIDKPIGRDPYHRKQMKVL--------DEGGKRAVTEFETLATDGQVSLVKIILKTGRTHQIRVHMQSKNAPVLGDSLYGSIAVNKKWKAE--------RQLLHAYRLSFLHPMTKKPITFQAPLPPDL 304          
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Match: A0A8J5XTC5_DIALT (PseudoU_synth_2 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTC5_DIALT)

HSP 1 Score: 155 bits (391), Expect = 2.620e-37
Identity = 106/343 (30.90%), Postives = 168/343 (48.98%), Query Frame = 0
Query:  143 LNVRPEDHNAPIDWLLSRRLPIMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTISVDNMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGMVCQPCEAASSGTVLHGLLHHMVQKNQAEEGDLA------------------TARNLSQGIVQRLDKATSGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGDPGFDSV-VNASLYRRSSGKTAAVVMSQAADFGAKNAQTRVRNVATTGGLSLCRADVTNGRMHQVRVHLKWKLCPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHPFTNRPMFFRAPMPPDM 466
            L V P++ +  +D LL  R  + SR ++     +G V +DG    +  R+  G+ +SV    +    AR              P+R+P L +LYED H  V+ K AG+V  P      GT+++G+L H++       G                       R  +  +V RLDK T+G +  AK+  +    SSL     +++ Y+A+C GDPG D + +   + R  + +    V+++A   G ++A++ VR +   G  SL R D+  GR HQ+RVH++    P+VGD +YG  + N+   K     +  RRPLLH+  L F HPFT R + F AP+P D+
Sbjct:  180 LTVLPDEADLRLDRLLVGRFELQSRTYFASLCAQGLVTMDGMRAAKGDRLRVGAVVSVQFTPTAEMEAR--------------PERMP-LDILYEDAHLLVLNKAAGVVVHPAPGHWEGTLVNGVLFHLLGNGHGAAGAXXXXXXXXXXXXXXXXXXXDALRAPTSTVVHRLDKGTTGAIAFAKSAESQRALSSLFRLRQVRKSYLAVCVGDPGADPIEITHPIGRDKANRLRMTVVAEA--DGGRSARSVVRRLCYDGRFSLVRVDIFTGRTHQIRVHMRAHGLPLVGDDEYGSKQWNQAALKG----LGVRRPLLHAHRLAFEHPFTQRALAFEAPLPDDL 501          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1110.902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K089_9PHAE1.100e-14761.94S4 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YI41_9STRA3.810e-6238.24Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XRN0_HETAK1.230e-5135.56Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A7S2USK5_9STRA1.140e-4534.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XXK7_HETAK2.770e-4334.66Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A6M1ZVU5_9BACT2.200e-4032.33Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A836CH15_9STRA2.710e-4033.75Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A2V8LI45_9BACT7.570e-4036.09Pseudouridine synthase (Fragment) n=1 Tax=Acidobac... [more]
A0A0H5E3K8_9BACT1.300e-3732.68Pseudouridine synthase n=1 Tax=Estrella lausannens... [more]
A0A8J5XTC5_DIALT2.620e-3730.90PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 242..404
e-value: 4.1E-23
score: 82.2
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 140..204
e-value: 1.4E-6
score: 29.6
NoneNo IPR availableGENE3D3.30.2350.10coord: 233..475
e-value: 1.3E-51
score: 177.2
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 154..472
NoneNo IPR availablePANTHERPTHR21600:SF34RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTICcoord: 154..472
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..538
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.626
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 154..202
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 293..307
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 152..239
score: 9.817
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 229..471

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1110contigH-elongata_contig1110:4600..7681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1110.902.1mRNA_H-elongata_contig1110.902.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1110 4168..7894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1110.902.1 ID=prot_H-elongata_contig1110.902.1|Name=mRNA_H-elongata_contig1110.902.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=539bp
MITIRHTRFSLVCAVFSSCAVRASGLALVTPWTRPRQLDRSALGMAAEAG
SIEMRMHSTSIAGREVLRDGPPFITTSPSVARNGATRRRHVSCSVRDGST
TGMGTENRGWTVSSPGGGGATSATRNIKATTNEDSGGSSSLVLNVRPEDH
NAPIDWLLSRRLPIMSRRFYRRALERGSVKVDGRTVKRFVRVARGSTISV
DNMSSVAAGARDRAGAPITPTNYLFPQRLPELRVLYEDPHCAVVVKPAGM
VCQPCEAASSGTVLHGLLHHMVQKNQAEEGDLATARNLSQGIVQRLDKAT
SGVMVVAKNLNAASKFSSLCDDGNIKQQYVAICHGDPGFDSVVNASLYRR
SSGKTAAVVMSQAADFGAKNAQTRVRNVATTGGLSLCRADVTNGRMHQVR
VHLKWKLCPVVGDKDYGDSEANRRVAKRGNFRVDQRRPLLHSMALEFTHP
FTNRPMFFRAPMPPDMWQTAKVILRASGTPEQRQEFEELQELQWKTAPIG
GRGAPRYLKNGGERKGARGSASARKAHAAIVAAGMVDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR036986S4_RNA-bd_sf
IPR006224PsdUridine_synth_RluC/D_CS
IPR002942S4_RNA-bd
IPR020103PsdUridine_synth_cat_dom_sf