prot_H-elongata_contig110856.891.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110856.891.1
Unique Nameprot_H-elongata_contig110856.891.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length190
Homology
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 1.920e-85
Identity = 130/190 (68.42%), Postives = 154/190 (81.05%), Query Frame = 0
Query:    1 MEERQRLLEDKTKSEAGVVSV--GEANNGPATTTDKALSALAYILPLADSMVFAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVNKLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIFVTMLVAVAYSIGVSATGAFPNKLPVIGRFNRENPDRDE 188
            MEERQR ++DK + +AG V V  G+ N+GPATT DKALSAL Y+LPLAD +VFAAHLF  FPEQTAW +P+ A LL LRSVPFATL GFF+LS+ SSNP++NKLVRF+MQQAINLDIAL LP  +GA+    LG DA KL PL+ AGSDV+FV +L AVAYS+G SATG+FPNKLP++GR NRENPD  E
Sbjct:    1 MEERQRQMDDKMRPDAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 190          
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 261 bits (666), Expect = 3.400e-83
Identity = 133/194 (68.56%), Postives = 158/194 (81.44%), Query Frame = 0
Query:    1 MEERQRLLEDKTKSEAG-----VVSVGEANNGPATTTDKALSALAYILPLADSMVFAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVNKLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIFVTMLVAVAYSIGVSATGAFPNKLPVIGRFNRENPDRDEE 189
            +EERQR +EDK  +E G     VV  G  N+GPAT  DKALSAL Y+LPL D + FA HLF  FPEQTAW QP+AA LL LRS+PFATL GFF+LS LS NP+VNKLVRF+MQQAINLDIAL +P  +GALAS++LGQDAYKL+PL++AGSDV+FV ML AVAYS+  S+TG+FPNKLP++GR NRENPDR+EE
Sbjct:  218 VEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDREEE 411          
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 5.170e-80
Identity = 125/180 (69.44%), Postives = 146/180 (81.11%), Query Frame = 0
Query:   11 KTKSEAGVVSV--GEANNGPATTTDKALSALAYILPLADSMVFAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVNKLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIFVTMLVAVAYSIGVSATGAFPNKLPVIGRFNRENPDRDE 188
            K + +AG V V  G+ N+GPATT DKALSAL Y+LPLAD +VFAAHLF  FPEQTAW QP+AA LL LRSVPFATL GFF+LS+ SSNP++NKLVRF+MQQAINLDIAL LP  +GA+    LG DA KL PL+ AGSDV+FV +L AVAYS+G SATG+FPNKLP++GR NRENPD  E
Sbjct:   93 KMRPDAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 272          
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 1.600e-78
Identity = 128/190 (67.37%), Postives = 149/190 (78.42%), Query Frame = 0
Query:    1 MEERQRLLEDKTKSEAG--VVSVGEANNGPATTTDKALSALAYILPLADSMVFAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVNKLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIFVTMLVAVAYSIGVSATGAFPNKLPVIGRFNRENPDRDE 188
            ME       D+ + +AG  VVS G+ N+GPATT DKALSAL Y+LPLAD +VFAAHLF  FPEQTAW QP+AA LL LRSVPFATL GFF+LSI SSNP++NKLVRF+MQQAINLDIAL LP  +GA+    LG DA KL PL+ A SDV+FV +L AVAYS+G SATG+FPNKLP++GR NRENPD  E
Sbjct:  220 MEXXXXXXXDRMRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 409          
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 4.160e-67
Identity = 116/169 (68.64%), Postives = 135/169 (79.88%), Query Frame = 0
Query:    1 MEERQRLLEDKTKSEAG--VVSVGEANNGPATTTDKALSALAYILPLADSMVFAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVNKLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIFVTMLVAVAYSIGVSATG 167
            +EERQR ++DK + + G  VVS G+ N+GPATT DKALSAL Y+LPL D ++FAAHLF  FPEQTAW QP+AA LL LRS+PFATL GFF+LSI SSNP VNKLVRF+MQQAINLDIAL LP  +GA+    LG DA KL PLS AGSDV+FV +L AVAYS+G SATG
Sbjct:  220 LEERQRQMDDKMRPDTGAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388          
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 2.000e-51
Identity = 97/191 (50.79%), Postives = 119/191 (62.30%), Query Frame = 0
Query:    1 MEERQRLLEDKTKSEAG--VVSVGEANNGPATTTDKALSALAYILPLADSMVFAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVNKLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIFVTMLVAVAYSIGVSATGAFPNKLPVIGRFNRENPDRDEE 189
            MEERQR ++D  + +AG  VVS G+ N+G   T D ALSAL Y+LPLAD +VFAAHLF  FPEQTAW QP+AAA                                      IN+DIAL LP  +GA+A   LG DA KL PL+ AGSDV+FV +L AVAYS+G SATG+FP+KLP++GR NRENP  ++E
Sbjct:   84 MEERQRQMDDNMRPDAGAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAAA--------------------------------------INVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNRENPGNEQE 236          
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 6.630e-51
Identity = 91/186 (48.92%), Postives = 134/186 (72.04%), Query Frame = 0
Query:    3 ERQRLLEDKTKSEAGVVS-VGEANN--GPATTTDKALSALAYILPLADSMVFAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVNKLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIFVTMLVAVAYSIGVSATGAFPNKLPVIGRFNRENPD 185
            ER+R ++ KT  +  ++S V +++     AT+ +KAL AL YILPL+D +V+A H+++TFP+Q AW +P+ A L+ + ++PFATL  FF +SILSSN  +NKL+RF+M QAIN DIAL +PS  G L + +LG DAYK+ P++   +D++ V++++AVAYSI  SATGA PNK+P  G+ NR   D
Sbjct:  217 ERKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINRVTRD 402          
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.480e-49
Identity = 86/128 (67.19%), Postives = 103/128 (80.47%), Query Frame = 0
Query:   63 TAWVQPIAAALLILRSVPFATLAGFFTLSILS-SNPEVNKLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIFVTMLVAVAYSIGVSATGAFPNKLPVIGRFNRENPDRDEE 189
            TAW QP+AA LL LRSVPFATL GFF+LS+    NP+VNKLVRF+ QQAIN+DIAL LP  +GA+A   LG DA KL PL+ AGSDV+FV +L AVAYS+G SATG+FPNKLP++GR NRENP+  +E
Sbjct:  176 TAWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPENQQE 303          
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 9.590e-47
Identity = 92/193 (47.67%), Postives = 127/193 (65.80%), Query Frame = 0
Query:    4 RQRLLE----DKTKSEA---GVVSVGEANNGPATTTDKALSALAYILPLADSMVFAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVNKLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIFVTMLVAVAYSIGVSATGAFPNKLPVIGRFNRENPDRDEE 189
            R+R +E    DK + EA   G+    + N+GP T TDK LS L Y LPL DS+VF AH+F TFP Q ++++P+ A LLI RS+PF+ L  FF L   ++ PEVNKLVRF+++QA+ LDIA+F PS    + +  LG+D+ KL PL+   +DVIFVT++  V YSI  SA G  P  LP++G+ NRE+    E+
Sbjct:  233 REREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKED 425          
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 2.870e-44
Identity = 86/126 (68.25%), Postives = 99/126 (78.57%), Query Frame = 0
Query:    1 MEERQRLLEDKTKSEAG--VVSVGEANNGPATTTDKALSALAYILPLADSMVFAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVNKLVRFDMQQAINLDIALFLPSWIG 124
            ME       D+ + +AG  VVS G+ N+GPATT DKALSAL Y+LPLAD +VFAAHLF  F EQTAW QP+AA LL LRSVPFATL GFF+LSI SSNP++NKLVRF+MQQAINLDIAL LP  +G
Sbjct:  220 MEXXXXXXXDRMRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110856.891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVD7_9PHAE1.920e-8568.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2I6U1M4_SACJA3.400e-8368.56Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
A0A6H5KUU9_9PHAE5.170e-8069.44Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LS19_ECTSI1.600e-7867.37EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
D7FRG5_ECTSI4.160e-6768.64EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5KCI4_9PHAE2.000e-5150.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY95_9PHAE6.630e-5148.92EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5JBJ0_9PHAE1.480e-4967.19EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LTM8_ECTSI9.590e-4747.67TIC 20 related, plastid import n=2 Tax=Ectocarpus ... [more]
D8LS20_ECTSI2.870e-4468.25EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005691Chloroplast protein import component Tic20PFAMPF16166TIC20coord: 34..176
e-value: 9.2E-11
score: 41.8
IPR005691Chloroplast protein import component Tic20PANTHERPTHR33510FAMILY NOT NAMEDcoord: 14..177
NoneNo IPR availablePANTHERPTHR33510:SF5PROTEIN TIC 20-II, CHLOROPLASTICcoord: 14..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..147
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..114
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110856contigH-elongata_contig110856:1576..2145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110856.891.1mRNA_H-elongata_contig110856.891.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110856 1576..2172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110856.891.1 ID=prot_H-elongata_contig110856.891.1|Name=mRNA_H-elongata_contig110856.891.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
MEERQRLLEDKTKSEAGVVSVGEANNGPATTTDKALSALAYILPLADSMV
FAAHLFTTFPEQTAWVQPIAAALLILRSVPFATLAGFFTLSILSSNPEVN
KLVRFDMQQAINLDIALFLPSWIGALASLALGQDAYKLLPLSQAGSDVIF
VTMLVAVAYSIGVSATGAFPNKLPVIGRFNRENPDRDEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005691Tic20