prot_H-elongata_contig110846.890.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110846.890.1
Unique Nameprot_H-elongata_contig110846.890.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
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BLAST of mRNA_H-elongata_contig110846.890.1 vs. uniprot
Match: D8LDL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL0_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 8.800e-22
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 0 
Query:  104 CERPYAFTNESDVACVELVNYEDREAGGGAFYDEEGCAWQTRGMSSIGCDFGGVARCRLCVFNRALYSAVILNGLEV 180
            CERPY ++NES++ CV++V   D+ +G GAFYDEEGC      +S +GC  GGV  CRLCVFNR L+S  IL G EV
Sbjct:   39 CERPYTWSNESEIPCVDMVTAVDKASGAGAFYDEEGCGPDAESISVVGCAHGGVGNCRLCVFNRGLFSETILGGEEV 115
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110846.890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDL0_ECTSI8.800e-2255.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110846contigH-elongata_contig110846:81..1999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110846.890.1mRNA_H-elongata_contig110846.890.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110846 81..1999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110846.890.1 ID=prot_H-elongata_contig110846.890.1|Name=mRNA_H-elongata_contig110846.890.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
DDDAPEETPAPTTPGPTESPTPEPTPAPTQAPTTQSPTAMPTTPSPTEAP
TLAPTRSPTLSPTPSPTTAPTLAPTPQPTFSKAPTLAPTPAPTPPPTFSY
SSYCERPYAFTNESDVACVELVNYEDREAGGGAFYDEEGCAWQTRGMSSI
GCDFGGVARCRLCVFNRALYSAVILNGLEV
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