prot_H-elongata_contig110818.889.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110818.889.1
Unique Nameprot_H-elongata_contig110818.889.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: D7FS69_ECTSI (Vps16_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS69_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.600e-21
Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = 0
Query:    1 MLADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKLLKV 58
            MLAD W +L +VQYRKIHLY+LDWA DEDR L   LVAVAKY GAVAM+RDETKLLK+
Sbjct:    1 MLADDWTTLRDVQYRKIHLYDLDWAEDEDRHLDRCLVAVAKYGGAVAMVRDETKLLKM 58          
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: A0A6P4XUS8_BRABE (Vacuolar protein sorting-associated protein 16 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XUS8_BRABE)

HSP 1 Score: 50.1 bits (118), Expect = 1.790e-5
Identity = 27/57 (47.37%), Postives = 33/57 (57.89%), Query Frame = 0
Query:    2 LADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKLLKV 58
            +   W  LG V YRK  +Y L W    D  L   +VA A Y G VA+IRDETKL++V
Sbjct:    4 VTGDWNPLGQVFYRKQEIYTLGW---RDIDLDKFVVAAAPYGGPVALIRDETKLVRV 57          
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: L2G314_COLFN (Vacuolar protein sorting vps16 n=1 Tax=Colletotrichum fructicola (strain Nara gc5) TaxID=1213859 RepID=L2G314_COLFN)

HSP 1 Score: 49.3 bits (116), Expect = 3.340e-5
Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    3 ADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKL 55
            + GW ++G+  YRKI LY   +  D+D  L ++LVA A Y+GA+A++RD+TKL
Sbjct:    8 SAGWENVGDKWYRKIQLYTEVF--DQDLDLDNHLVAGAPYAGALALLRDDTKL 58          
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: C3ZIW0_BRAFL (Vacuolar protein sorting-associated protein 16 homolog n=6 Tax=Branchiostoma TaxID=7737 RepID=C3ZIW0_BRAFL)

HSP 1 Score: 49.3 bits (116), Expect = 3.360e-5
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0
Query:    2 LADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKLLKV 58
            +   W  LG V YRK  +Y++ W    D  L   +VA A Y G +A+IRDETKL++V
Sbjct:    4 VTGDWNPLGQVFYRKQEIYSMGW---RDIDLDKFVVAAAPYGGPIALIRDETKLVRV 57          
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: A0A7J6JL75_COLFN (Probable vacuolar protein sorting-associated protein 16 homolog n=10 Tax=Colletotrichum TaxID=5455 RepID=A0A7J6JL75_COLFN)

HSP 1 Score: 49.3 bits (116), Expect = 3.370e-5
Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    3 ADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKL 55
            + GW ++G+  YRKI LY   +  D+D  L ++LVA A Y+GA+A++RD+TKL
Sbjct:    7 SAGWENVGDKWYRKIQLYTEVF--DQDLDLDNHLVAGAPYAGALALLRDDTKL 57          
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: A0A8J9Z1U9_BRALA (VPS16 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9Z1U9_BRALA)

HSP 1 Score: 49.3 bits (116), Expect = 3.410e-5
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0
Query:    2 LADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKLLKV 58
            +   W  LG V YRK  +Y++ W    D  L   +VA A Y G +A+IRDETKL++V
Sbjct:    4 VTGDWNPLGQVFYRKQEIYSMGW---RDIDLDKFVVAAAPYGGPIALIRDETKLVRV 57          
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: A0A1J7JUQ5_9PEZI (Probable vacuolar protein sorting-associated protein 16 homolog n=1 Tax=Coniochaeta ligniaria NRRL 30616 TaxID=1408157 RepID=A0A1J7JUQ5_9PEZI)

HSP 1 Score: 48.9 bits (115), Expect = 4.610e-5
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    3 ADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKLL 56
             DGW  +G   YRKI LY   +  DED  L + +VA A Y+GA+A+ RDE KL+
Sbjct:    7 TDGWEQVGERFYRKIALYTAIF--DEDLDLDNYIVAGAPYAGAIALYRDENKLV 58          
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: A0A4U6X8F9_9PEZI (Probable vacuolar protein sorting-associated protein 16 homolog n=17 Tax=Colletotrichum TaxID=5455 RepID=A0A4U6X8F9_9PEZI)

HSP 1 Score: 48.9 bits (115), Expect = 4.610e-5
Identity = 23/53 (43.40%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    3 ADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKL 55
            A GW ++G+  YRK+ LY   +  D+D  L +++VA A Y GA+A++RD+TK+
Sbjct:    8 AAGWENVGDKWYRKVQLYTEVF--DQDLDLDNHIVAGAPYGGAIALLRDDTKI 58          
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: A0A433SPT9_ELYCH (Vacuolar protein sorting-associated protein 16 homolog n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SPT9_ELYCH)

HSP 1 Score: 48.5 bits (114), Expect = 6.300e-5
Identity = 23/60 (38.33%), Postives = 36/60 (60.00%), Query Frame = 0
Query:    1 MLADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKLLKVLS 60
            M    W  LG+V YRK  LY ++W    D  L  + VA + Y G +A+++DE+KL +V++
Sbjct:    1 MATADWNPLGDVYYRKCELYAMEWCGLVD--LAKHSVATSTYGGPIALMKDESKLSRVVT 58          
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Match: A0A5N5MUG9_9PEZI (Probable vacuolar protein sorting-associated protein 16 homolog n=2 Tax=Coniochaeta sp. 2T2.1 TaxID=1571157 RepID=A0A5N5MUG9_9PEZI)

HSP 1 Score: 48.1 bits (113), Expect = 8.630e-5
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    3 ADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIRDETKLL 56
             +GW  +G   YRKI LY   +  DED  L + +VA A Y+GA+A+ RDE+KL+
Sbjct:    7 TEGWEQVGERFYRKISLYTAIF--DEDLDLDNYIVAGAPYAGAIALYRDESKLV 58          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110818.889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FS69_ECTSI1.600e-2175.86Vps16_N domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6P4XUS8_BRABE1.790e-547.37Vacuolar protein sorting-associated protein 16 hom... [more]
L2G314_COLFN3.340e-547.17Vacuolar protein sorting vps16 n=1 Tax=Colletotric... [more]
C3ZIW0_BRAFL3.360e-543.86Vacuolar protein sorting-associated protein 16 hom... [more]
A0A7J6JL75_COLFN3.370e-547.17Probable vacuolar protein sorting-associated prote... [more]
A0A8J9Z1U9_BRALA3.410e-543.86VPS16 protein n=1 Tax=Branchiostoma lanceolatum Ta... [more]
A0A1J7JUQ5_9PEZI4.610e-548.15Probable vacuolar protein sorting-associated prote... [more]
A0A4U6X8F9_9PEZI4.610e-543.40Probable vacuolar protein sorting-associated prote... [more]
A0A433SPT9_ELYCH6.300e-538.33Vacuolar protein sorting-associated protein 16 hom... [more]
A0A5N5MUG9_9PEZI8.630e-546.30Probable vacuolar protein sorting-associated prote... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006926Vps16, N-terminalPFAMPF04841Vps16_Ncoord: 6..58
e-value: 7.7E-6
score: 24.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110818contigH-elongata_contig110818:665..853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110818.889.1mRNA_H-elongata_contig110818.889.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110818 665..853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110818.889.1 ID=prot_H-elongata_contig110818.889.1|Name=mRNA_H-elongata_contig110818.889.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
MLADGWISLGNVQYRKIHLYNLDWANDEDRCLGHNLVAVAKYSGAVAMIR
DETKLLKVLSMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006926Vps16_N