prot_H-elongata_contig110687.883.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110687.883.1
Unique Nameprot_H-elongata_contig110687.883.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
BLAST of mRNA_H-elongata_contig110687.883.1 vs. uniprot
Match: D7G0J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J5_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 1.910e-7
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 0
Query:    1 RSVDVVTALATPLTYEGLIDDLIGIENG 28
            R VD+VTALATPLTYEGLIDDLIGIENG
Sbjct:  257 RGVDLVTALATPLTYEGLIDDLIGIENG 284          
BLAST of mRNA_H-elongata_contig110687.883.1 vs. uniprot
Match: A0A6H5L2P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P5_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.560e-7
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0
Query:    1 RSVDVVTALATPLTYEGLIDDLIGIENG 28
            R VD+VTA+ATPLTYEGLIDDLIGIENG
Sbjct:  257 RGVDLVTAMATPLTYEGLIDDLIGIENG 284          
BLAST of mRNA_H-elongata_contig110687.883.1 vs. uniprot
Match: A0A077QU67_9BASI (Probable vacuolar sorting protein (HbrA) n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077QU67_9BASI)

HSP 1 Score: 50.1 bits (118), Expect = 8.180e-6
Identity = 25/50 (50.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:    1 RSVDVVTALATPLTYEGLIDDLIGIENG---------LGQKQNTCGVGIH 41
            RSVD  T L T LTYEGL+D+++GI +G          GQ QN  GVG H
Sbjct:  299 RSVDYATPLCTQLTYEGLVDEVVGISSGHVEVDPSLLTGQSQNAAGVGSH 348          
BLAST of mRNA_H-elongata_contig110687.883.1 vs. uniprot
Match: A0A7S2PEM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PEM1_9STRA)

HSP 1 Score: 45.4 bits (106), Expect = 7.480e-5
Identity = 18/28 (64.29%), Postives = 26/28 (92.86%), Query Frame = 0
Query:    1 RSVDVVTALATPLTYEGLIDDLIGIENG 28
            R++D+VT + TPLTYEGL+DD+IG++NG
Sbjct:   54 RTLDLVTPMLTPLTYEGLVDDIIGMKNG 81          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110687.883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0J5_ECTSI1.910e-792.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2P5_9PHAE3.560e-789.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A077QU67_9BASI8.180e-650.00Probable vacuolar sorting protein (HbrA) n=1 Tax=M... [more]
A0A7S2PEM1_9STRA7.480e-564.29Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027482Sec1-like, domain 2GENE3D3.40.50.1910coord: 1..11
e-value: 2.3E-9
score: 39.0
IPR001619Sec1-like proteinPFAMPF00995Sec1coord: 1..27
e-value: 5.7E-8
score: 32.4
NoneNo IPR availableGENE3D3.90.830.10coord: 12..31
e-value: 2.3E-9
score: 39.0
IPR036045Sec1-like superfamilySUPERFAMILY56815Sec1/munc18-like (SM) proteinscoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110687contigH-elongata_contig110687:1833..1967 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110687.883.1mRNA_H-elongata_contig110687.883.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110687 1833..1967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110687.883.1 ID=prot_H-elongata_contig110687.883.1|Name=mRNA_H-elongata_contig110687.883.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
RSVDVVTALATPLTYEGLIDDLIGIENGLGQKQNTCGVGIHNKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027482Sec-1-like_dom2
IPR001619Sec1-like
IPR036045Sec1-like_sf