mRNA_H-elongata_contig110460.864.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: D7FY26_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY26_ECTSI) HSP 1 Score: 194 bits (493), Expect = 2.230e-55 Identity = 89/105 (84.76%), Postives = 100/105 (95.24%), Query Frame = 2
Query: 2 EKLTLSILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNEDGLTTLMYMQALYKHDWHNFMEREGI 316
+K TLSILEKLHGL+GIDRN+AEP+SVEARRRLAFF NSLFMD+PRAPPV DMMSWSC+TPFYSEDV+YSR DL+Q+NEDGLTTLMY+QALYKHDW NFMER+GI
Sbjct: 1094 DKTTLSILEKLHGLLGIDRNDAEPHSVEARRRLAFFANSLFMDMPRAPPVQDMMSWSCMTPFYSEDVVYSRGDLDQKNEDGLTTLMYLQALYKHDWRNFMERKGI 1198
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 194 bits (492), Expect = 3.080e-55 Identity = 89/105 (84.76%), Postives = 99/105 (94.29%), Query Frame = 2
Query: 2 EKLTLSILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNEDGLTTLMYMQALYKHDWHNFMEREGI 316
+K TLSILEKLHGL+GIDRN+AEP+SVEARRRLAFF NSLFMD+PRAPPV DMMSWSC+TPFYSEDV+YSR DL+Q+NEDGLTTLMY+QALYKHDW NFMER GI
Sbjct: 1203 DKTTLSILEKLHGLLGIDRNDAEPHSVEARRRLAFFTNSLFMDMPRAPPVQDMMSWSCMTPFYSEDVVYSRGDLDQKNEDGLTTLMYLQALYKHDWRNFMERRGI 1307
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA) HSP 1 Score: 164 bits (414), Expect = 9.970e-45 Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 2
Query: 8 LTLSILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNEDGLTTLMYMQALYKHDWHNFMEREGI 316
LT SIL KL+GL+ I +AEP S EARRRL FFVNSLFMD+PRAP + +M+SWSC+TP+YSEDV+Y R DLE+RNEDGL+ LMY+QALYKHDWHNF+ER GI
Sbjct: 970 LTKSILSKLYGLLAIQAGDAEPASPEARRRLTFFVNSLFMDMPRAPQLANMLSWSCVTPYYSEDVLYGRKDLEKRNEDGLSMLMYLQALYKHDWHNFLERNGI 1072
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA) HSP 1 Score: 150 bits (378), Expect = 7.090e-40 Identity = 68/101 (67.33%), Postives = 86/101 (85.15%), Query Frame = 2
Query: 14 LSILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNEDGLTTLMYMQALYKHDWHNFMEREGI 316
++IL KL+GL+ + NEAEP+S EA+RRL+FFVNSLFMD+P+APPV DM+SW+ +TPFYSEDVI +R DLE+RNEDGLT +MY+Q LY DW NF+ER GI
Sbjct: 718 MAILRKLYGLLAVTPNEAEPHSPEAQRRLSFFVNSLFMDVPKAPPVADMLSWTVMTPFYSEDVILTRADLERRNEDGLTVMMYLQTLYASDWKNFLERLGI 818
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: W7U1M2_9STRA (1,3-beta-glucan synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M2_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.560e-37 Identity = 64/101 (63.37%), Postives = 80/101 (79.21%), Query Frame = 2
Query: 14 LSILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNEDGLTTLMYMQALYKHDWHNFMEREGI 316
+ +L KL GL+ + +AEP S EARRRL+FFVNSLFMD+P+AP + DMMSW+ ITPFYSEDV+Y+R DLE NEDG+ TL+Y+Q LYK DW NF ER G+
Sbjct: 1336 MPVLAKLQGLLTLHVGDAEPKSAEARRRLSFFVNSLFMDVPKAPSISDMMSWTVITPFYSEDVLYNRKDLEAANEDGVNTLLYLQTLYKSDWKNFQERLGL 1436
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: A0A7S3LFK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFK8_9STRA) HSP 1 Score: 132 bits (332), Expect = 3.680e-36 Identity = 60/101 (59.41%), Postives = 81/101 (80.20%), Query Frame = 2
Query: 17 SILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNED-GLTTLMYMQALYKHDWHNFMEREGI 316
++L+K+HGL+ + +E EP S E RRRL FFVNSLFMD+P AP + DM SW+ +TP+YSEDV YS+ DLE+R++ G++TL+Y+Q LYK DWHNF+ER GI
Sbjct: 109 AVLKKIHGLMCMHPDEVEPKSKEVRRRLTFFVNSLFMDMPDAPSIHDMFSWNVLTPYYSEDVTYSKADLERRSDALGVSTLLYLQTLYKPDWHNFLERLGI 209
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: B7FQP6_PHATC (1,3-beta-glucan synthase n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQP6_PHATC) HSP 1 Score: 134 bits (337), Expect = 2.410e-34 Identity = 60/101 (59.41%), Postives = 83/101 (82.18%), Query Frame = 2
Query: 17 SILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNED-GLTTLMYMQALYKHDWHNFMEREGI 316
++L+K+HGLV + ++AEP S E RRRL FFVNSLFMD+P AP + DM SW+ +TP+YSEDV YS+DDLE+R++ G++TL+Y+Q LY+ DW+NF+ER GI
Sbjct: 1148 AVLKKMHGLVCMHPDDAEPKSKEVRRRLTFFVNSLFMDMPNAPSIHDMFSWNVLTPYYSEDVTYSKDDLEKRSDALGVSTLLYLQTLYRSDWNNFLERLGI 1248
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: A0A812UTS8_SYMMI (CALS5 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTS8_SYMMI) HSP 1 Score: 131 bits (330), Expect = 2.040e-33 Identity = 59/101 (58.42%), Postives = 78/101 (77.23%), Query Frame = 2
Query: 14 LSILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNEDGLTTLMYMQALYKHDWHNFMEREGI 316
L +L K++GL + + + EP+S EARRRL FFVNSLFM +P P + D +SC+TPFYSEDV+ +RDDLEQ+N DG+ TL+Y+Q LYK DWHNF+ER G+
Sbjct: 26 LPVLNKINGLFKLRQVQVEPSSSEARRRLHFFVNSLFMMMPSIPSMVDCKEYSCLTPFYSEDVLLTRDDLEQKNSDGVGTLLYLQTLYKKDWHNFLERRGL 126
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: A0A1Z5JIZ9_FISSO (1,3-beta-glucan synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIZ9_FISSO) HSP 1 Score: 131 bits (330), Expect = 2.120e-33 Identity = 60/100 (60.00%), Postives = 82/100 (82.00%), Query Frame = 2
Query: 20 ILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNED-GLTTLMYMQALYKHDWHNFMEREGI 316
+L+KL+GLV + ++AEP S EARRRL FFVNSLFMD+P AP + DM SW+ +TPFYSEDV+YS+ DLE+R + G++TL+Y+Q LY+ DW+NF+ER G+
Sbjct: 1167 VLKKLYGLVCMHPDDAEPKSKEARRRLTFFVNSLFMDMPDAPSIHDMFSWNVLTPFYSEDVLYSKADLERRTDALGVSTLLYLQTLYRSDWNNFLERLGV 1266
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Match: A0A7S1UZ62_9STRA (1,3-beta-glucan synthase n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ62_9STRA) HSP 1 Score: 130 bits (326), Expect = 7.350e-33 Identity = 55/100 (55.00%), Postives = 81/100 (81.00%), Query Frame = 2
Query: 20 ILEKLHGLVGIDRNEAEPNSVEARRRLAFFVNSLFMDLPRAPPVGDMMSWSCITPFYSEDVIYSRDDLEQRNED-GLTTLMYMQALYKHDWHNFMEREGI 316
+L+K+HGL+ + ++ EP S++ RRRL FFVNSLFMD+P AP + DM SW+ +TP+YSEDV Y++DDL +R++ G++TL+Y+Q LY+ DW+NF+ER GI
Sbjct: 1162 VLKKIHGLIALHPDDVEPKSIDVRRRLTFFVNSLFMDMPNAPSIHDMFSWNVLTPYYSEDVTYTKDDLMKRSDALGVSTLLYLQTLYRADWNNFVERMGI 1261 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110460.864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig110460.864.1 >prot_H-elongata_contig110460.864.1 ID=prot_H-elongata_contig110460.864.1|Name=mRNA_H-elongata_contig110460.864.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp GEADSLHTREAARTGRHRPQRGGAELGRSPPTPRVLRELPVHGPAPRPPRback to top mRNA from alignment at H-elongata_contig110460:1000..2082+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig110460.864.1 ID=mRNA_H-elongata_contig110460.864.1|Name=mRNA_H-elongata_contig110460.864.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1083bp|location=Sequence derived from alignment at H-elongata_contig110460:1000..2082+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig110460:1000..2082+ >mRNA_H-elongata_contig110460.864.1 ID=mRNA_H-elongata_contig110460.864.1|Name=mRNA_H-elongata_contig110460.864.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=636bp|location=Sequence derived from alignment at H-elongata_contig110460:1000..2082+ (Himanthalia elongata Himel1 dioecious)back to top |