mRNA_H-elongata_contig11037.855.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11037.855.1
Unique NamemRNA_H-elongata_contig11037.855.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig11037.855.1 vs. uniprot
Match: D8LR74_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR74_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 5.390e-125
Identity = 217/330 (65.76%), Postives = 258/330 (78.18%), Query Frame = 1 
Query:    1 KGCANALLNLASDAGRELEITRCGAVSALLITALVASDSNETRHACTKALTNLLCEKQAHHDMFRDGVLWGLSTMSRSNDVIIARLCSVALCNLSCKYWKDIATSNSIKAVYYFSRSDDEAVMGAGVKTLHNVLLRAQHLDGVEHIFASAVPLAGRALEHISKDVRLVGLRLTHLISTTTTSRETAIQHGLMKRVDVKDFVSDEPLCHSFCCALERFALDPATRRSVLDSGCIISFPALGAVSPRILECLTRFLYIVSCSPEHVAALVLEHDCVKVAAAV------------VDQRCADGTGSP---------DGTRDMCAALLFNLSTQ 927
            KGCAN LLNLA D GRE+EIT+CGAVS LLITALVASDS+ETRHACTKALTNLLCEKQAH  MF+DGV+WGL+ MSRSNDV IA+LCSVALCNLSC+YWK+IA SN ++AVY  +RS DEAVM AG+K LHNVLLRAQHL+GV HIF+  VP+A RAL H SK++RLVG+RLT+L+ST   +R+TA+ + +++RV+V DF SDEPL +SFCCALERFALDPATR SVL SGCI +F AL A+S RI+  L +F+Y VSCSPE V +LVLEHD +KV AAV            V+ R   G GS          DG ++ CAALLFN+STQ
Sbjct:  709 KGCANTLLNLAYDHGREIEITKCGAVSVLLITALVASDSDETRHACTKALTNLLCEKQAHRGMFKDGVVWGLAAMSRSNDVTIAKLCSVALCNLSCEYWKEIAMSNCMQAVYGLARSSDEAVMSAGMKALHNVLLRAQHLEGVGHIFSGTVPIARRALMHKSKEIRLVGVRLTNLVSTALVARQTAMLYRIVERVNVGDFDSDEPLSYSFCCALERFALDPATRSSVLHSGCIDNFTALCAMSGRIMSRLAQFMYSVSCSPELVPSLVLEHDGMKVIAAVLEPVVQEEEDGSVEGRQGGGAGSXGGEDRKESLDGAKETCAALLFNMSTQ 1038
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BLAST of mRNA_H-elongata_contig11037.855.1 vs. uniprot
Match: A0A6H5KQD4_9PHAE (Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD4_9PHAE)

HSP 1 Score: 402 bits (1034), Expect = 1.350e-120
Identity = 209/330 (63.33%), Postives = 253/330 (76.67%), Query Frame = 1 
Query:    1 KGCANALLNLASDAGRELEITRCGAVSALLITALVASDSNETRHACTKALTNLLCEKQAHHDMFRDGVLWGLSTMSRSNDVIIARLCSVALCNLSCKYWKDIATSNSIKAVYYFSRSDDEAVMGAGVKTLHNVLLRAQHLDGVEHIFASAVPLAGRALEHISKDVRLVGLRLTHLISTTTTSRETAIQHGLMKRVDVKDFVSDEPLCHSFCCALERFALDPATRRSVLDSGCIISFPALGAVSPRILECLTRFLYIVSCSPEHVAALVLEHDCVKVAAAVVDQRCADGTG---------------------SPDGTRDMCAALLFNLSTQ 927
            KGCAN LLNLA D GRE+EIT+CGAVS LLITALVASDS+ETRHACTKALTNLLCEKQAH  MF+DGV+WGL+ MSRS DV IA+LCSVALCNLSC+YWK+I  SN ++AVY  +RS D AVM AG+K LHNVLLRAQHL+GV HIF+  VP+A RAL H SK++RLVG+RLT+L+ST + +R+TA+ + +++RV+V DF SDEPL +SFCCALERFALDPATR +VL SGC+ +F AL A+S RI+  L  F+Y VSCSPE VA+LVLEHD +KV A V++    +  G                     S DG +  CAALLFN+STQ
Sbjct:  439 KGCANTLLNLAYDHGREIEITKCGAVSVLLITALVASDSDETRHACTKALTNLLCEKQAHRGMFKDGVVWGLAAMSRSKDVTIAKLCSVALCNLSCEYWKEITMSNCMQAVYGLARSSDAAVMSAGMKALHNVLLRAQHLEGVGHIFSGTVPIARRALMHESKEIRLVGVRLTNLVSTASVARQTAMLYRIVERVNVGDFDSDEPLSYSFCCALERFALDPATRSAVLHSGCVNNFTALCAMSGRIMSRLAYFMYCVSCSPELVASLVLEHDGMKVIAVVLELGSQEDEGGAVEGGQGGGAGSRVGEGRKESLDGAKATCAALLFNMSTQ 768
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BLAST of mRNA_H-elongata_contig11037.855.1 vs. uniprot
Match: F0YJH6_AURAN (Vacuolar protein 8 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJH6_AURAN)

HSP 1 Score: 99.0 bits (245), Expect = 8.920e-18
Identity = 65/192 (33.85%), Postives = 103/192 (53.65%), Query Frame = 2 
Query:  932 DIRTELVMKGAVQLAFALWEGAGTTARRNCSLVACNLAVGKVNTAKIVQNGAGKLLVELVSTTDPDKD----------------ADGNHVQLAREGAIPAVMDLAETECPVVRRNCASAMRSMTCKADIRQLLIASGAAKVILDDAK-TQDDDDNLVIDNTLLCEIEAESWTNGTRGILVESR----APPLM 1444
            +++  LV +GA++     W   G + R   +L+ACNLA G+VNTA+IV++G   ++  L S   PD                     N   +A  GAI  ++ LA  + P+  ++CASA+R  T     R++L+ SGA  VIL D++ +    D+L + ++LLC++E ESW NG+R    E R    APP++
Sbjct: 1060 NVQASLVQQGAIEFTVDHWAMMGESERLLAALMACNLACGEVNTARIVKSGGSMVISYLAS---PDSSPFQCRCCAIALRNLVRVAANQRPMAASGAIDTLVALAALDDPLTTQHCASALRIFTYNKTTREVLVKSGAISVILADSQGSTGTGDDLQLSHSLLCKVETESWKNGSRSGQQEGRTRLPAPPVL 1248
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BLAST of mRNA_H-elongata_contig11037.855.1 vs. uniprot
Match: A0A6A3ZK58_9STRA (Vacuolar protein 8 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3ZK58_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 9.600e-7
Identity = 45/143 (31.47%), Postives = 72/143 (50.35%), Query Frame = 1 
Query:    7 CANALLNLASDAGRELEITRCGAVSALLITALVASDSNETRHACTKALTNLLCEKQAH--HDMFRDGVLWGLSTMSRSNDVIIARLCSVALCNLS---CKYWKDIATSNSIKAVYYFSRS------DDEAVMGAGVKTLHNVL 402
            C  AL  L+S AG E  +   GAV A+++ ALVA+DSN  +      L N L +   H    +   G++W LS++       ++ +C+V+LCNLS   CK  K +        ++  S S      +D A++   VKT+ N++
Sbjct:  953 CTMALCRLSSFAGLESRLIEQGAVQAVMVLALVATDSNTIKALSIMTLANCLVDVTPHCLQSLVGHGIIWALSSLCTVQYPEVSYVCAVSLCNLSAHPCKIPKFLDAGAPRALIHLLSHSGGADAAEDAAIVLVTVKTIANLV 1095
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BLAST of mRNA_H-elongata_contig11037.855.1 vs. uniprot
Match: A0A6A3M971_9STRA (Vacuolar protein 8 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3M971_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.030e-6
Identity = 45/143 (31.47%), Postives = 72/143 (50.35%), Query Frame = 1 
Query:    7 CANALLNLASDAGRELEITRCGAVSALLITALVASDSNETRHACTKALTNLLCEKQAH--HDMFRDGVLWGLSTMSRSNDVIIARLCSVALCNLS---CKYWKDIATSNSIKAVYYFSRS------DDEAVMGAGVKTLHNVL 402
            C  AL  L+S AG E  +   GAV A+++ ALVA+DSN  +      L N L +   H    +   G++W LS++       ++ +C+V+LCNLS   CK  K +        ++  S S      +D A++   VKT+ N++
Sbjct:  953 CTMALCRLSSFAGLESRLIEQGAVQAVMVLALVATDSNTIKALSIMTLANCLVDVTPHCLQSLVGHGIIWALSSLCTVQYPEVSYVCAVSLCNLSAHPCKIPKFLDAGAPRALIHLLSHSGGADAAEDAAIVLVTVKTIANLV 1095
[Close]
BLAST of mRNA_H-elongata_contig11037.855.1 vs. uniprot
Match: H3GLJ4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLJ4_PHYRM)

HSP 1 Score: 61.2 bits (147), Expect = 4.840e-6
Identity = 44/143 (30.77%), Postives = 71/143 (49.65%), Query Frame = 1 
Query:    7 CANALLNLASDAGRELEITRCGAVSALLITALVASDSNETRHACTKALTNLLCEKQAH--HDMFRDGVLWGLSTMSRSNDVIIARLCSVALCNLSC---KYWKDIATSNSIKAVYYFSRS------DDEAVMGAGVKTLHNVL 402
            C  AL  L+S AG E  +   GA+ A+++ ALVA+DS   +  C   L N L +   H    +   G++W LS++       +  +C+V+LCNLS    K  K +        ++  SRS      +D A++   VKT+ N++
Sbjct:  334 CTLALCRLSSFAGLESRLIEQGAIQAVMVLALVATDSITIKALCIMTLANCLVDVTPHCLQSLVGHGIIWALSSLCTVEYPEVGYVCAVSLCNLSAHPNKVPKFLDAGAPRALIHLLSRSGGADAAEDAAIVLVTVKTIANLV 476
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11037.855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LR74_ECTSI5.390e-12565.76Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KQD4_9PHAE1.350e-12063.33Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 131... [more]
F0YJH6_AURAN8.920e-1833.85Vacuolar protein 8 n=1 Tax=Aureococcus anophageffe... [more]
A0A6A3ZK58_9STRA9.600e-731.47Vacuolar protein 8 n=1 Tax=Phytophthora fragariae ... [more]
A0A6A3M971_9STRA1.030e-631.47Vacuolar protein 8 n=7 Tax=Phytophthora TaxID=4783... [more]
H3GLJ4_PHYRM4.840e-630.77Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11037contigH-elongata_contig11037:2676..8650 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.2
Seed ortholog evalue1.1e-82
Seed eggNOG ortholog2880.D8LR74
EggNOG free text desc.Armadillo/beta-catenin-like repeats
EggNOG OGs2C7KE@1,2QPXB@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons10
Model size1744
Cds size753
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11037.855.1prot_H-elongata_contig11037.855.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11037 5643..7866 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929630.5021453-UTR-H-elongata_contig11037:2675..28461622929630.5021453-UTR-H-elongata_contig11037:2675..2846Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 2676..2846 -
1691679098.3195-UTR-H-elongata_contig11037:2675..28461691679098.3195-UTR-H-elongata_contig11037:2675..2846Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 2676..2846 -
1622929630.518235-UTR-H-elongata_contig11037:3480..37231622929630.518235-UTR-H-elongata_contig11037:3480..3723Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 3481..3723 -
1691679098.3309388-UTR-H-elongata_contig11037:3480..37231691679098.3309388-UTR-H-elongata_contig11037:3480..3723Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 3481..3723 -
1622929630.5492046-UTR-H-elongata_contig11037:4227..44161622929630.5492046-UTR-H-elongata_contig11037:4227..4416Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 4228..4416 -
1691679098.3421106-UTR-H-elongata_contig11037:4227..44161691679098.3421106-UTR-H-elongata_contig11037:4227..4416Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 4228..4416 -
1622929630.5732543-UTR-H-elongata_contig11037:4933..50201622929630.5732543-UTR-H-elongata_contig11037:4933..5020Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 4934..5020 -
1691679098.349638-UTR-H-elongata_contig11037:4933..50201691679098.349638-UTR-H-elongata_contig11037:4933..5020Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 4934..5020 -
1622929630.5914483-UTR-H-elongata_contig11037:5194..53081622929630.5914483-UTR-H-elongata_contig11037:5194..5308Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 5195..5308 -
1691679098.3571045-UTR-H-elongata_contig11037:5194..53081691679098.3571045-UTR-H-elongata_contig11037:5194..5308Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 5195..5308 -
1622929630.6076863-UTR-H-elongata_contig11037:5641..56421622929630.6076863-UTR-H-elongata_contig11037:5641..5642Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 5642..5642 -
1691679098.3646202-UTR-H-elongata_contig11037:5641..56421691679098.3646202-UTR-H-elongata_contig11037:5641..5642Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 5642..5642 -
1622929630.6752884-UTR-H-elongata_contig11037:7866..78781622929630.6752884-UTR-H-elongata_contig11037:7866..7878Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 7867..7878 -
1691679098.4211552-UTR-H-elongata_contig11037:7866..78781691679098.4211552-UTR-H-elongata_contig11037:7866..7878Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 7867..7878 -
1622929630.6869311-UTR-H-elongata_contig11037:8476..86501622929630.6869311-UTR-H-elongata_contig11037:8476..8650Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 8477..8650 -
1691679098.4385915-UTR-H-elongata_contig11037:8476..86501691679098.4385915-UTR-H-elongata_contig11037:8476..8650Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11037 8477..8650 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929630.621802-CDS-H-elongata_contig11037:5642..59681622929630.621802-CDS-H-elongata_contig11037:5642..5968Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11037 5643..5968 -
1691679098.3718767-CDS-H-elongata_contig11037:5642..59681691679098.3718767-CDS-H-elongata_contig11037:5642..5968Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11037 5643..5968 -
1622929630.6327617-CDS-H-elongata_contig11037:6432..65951622929630.6327617-CDS-H-elongata_contig11037:6432..6595Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11037 6433..6595 -
1691679098.3866174-CDS-H-elongata_contig11037:6432..65951691679098.3866174-CDS-H-elongata_contig11037:6432..6595Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11037 6433..6595 -
1622929630.6448746-CDS-H-elongata_contig11037:7129..72521622929630.6448746-CDS-H-elongata_contig11037:7129..7252Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11037 7130..7252 -
1691679098.3985217-CDS-H-elongata_contig11037:7129..72521691679098.3985217-CDS-H-elongata_contig11037:7129..7252Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11037 7130..7252 -
1622929630.660989-CDS-H-elongata_contig11037:7725..78661622929630.660989-CDS-H-elongata_contig11037:7725..7866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11037 7726..7866 -
1691679098.4086485-CDS-H-elongata_contig11037:7725..78661691679098.4086485-CDS-H-elongata_contig11037:7725..7866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11037 7726..7866 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11037.855.1

>prot_H-elongata_contig11037.855.1 ID=prot_H-elongata_contig11037.855.1|Name=mRNA_H-elongata_contig11037.855.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=251bp
MFRDGVLWGLSTMSRSNDVIIARLCSVALCNLSCKYWKDIATSNSIKAVY
YFSRSDDEAVMGAGVKTLHNVLLRAQHLDGVEHIFASAVPLAGRALEHIS
KDVRLVGLRLTHLISTTTTSRETAIQHGLMKRVDVKDFVSDEPLCHSFCC
ALERFALDPATRRSVLDSGCIISFPALGAVSPRILECLTRFLYIVSCSPE
HVAALVLEHDCVKVAAAVVDQRCADGTGSPDGTRDMCAALLFNLSTQARY
*
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mRNA from alignment at H-elongata_contig11037:2676..8650-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11037.855.1 ID=mRNA_H-elongata_contig11037.855.1|Name=mRNA_H-elongata_contig11037.855.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5975bp|location=Sequence derived from alignment at H-elongata_contig11037:2676..8650- (Himanthalia elongata Himel1 dioecious)
AAGGGCTGCGCGAATGCTCTCCTCAACCTGGCGTCTGACGCCGGACGCGA
ACTGGAGATAACTAGGTGCGGCGCCGTGTCGGCCCTGCTAATCACGGCGC
TGGTGGCCTCGGACAGCAACGAGACGCGCCACGCCTGCACCAAGGCTCTC
ACGAATCTCCTGTGCGAGAAGCAGGTGATTTTGAGCCTGCAAACGAACCA
ACGATTGAGGCACGGGAAGATCGAACAGGCGAATTGATGGTAGATACGCG
GACGAGTGGACGGATGCATAGAAATATATACAGACAAACAGACGCACGGG
CGAGAAGCGATGGTCGAGGTGCCAACAATAAAACGAAAATAGGACCAATG
AACAAATGAAAGGAGAAAACGAACTGAGAATTGCGAAACGAGCAACCGGA
CGGGCGCAAACGAACGAACGAGCAAATGGGGACGAACGAAACGGAGCAAT
GAAACCAAACGAAATATAACGTACGGGACAAAAGAATCAAAGAACGGAAC
ACACCCACCCGAACATGGTGATGCGCGTGGTCCCTCGTGTTTTCACAGAA
GTGAATAATTAGAGAGTTTTAAATAAAAAAAGGAATAAACGAACAGCGAA
CACCACGCGTATACGACAAACACCCCGGAGCTCCGTCAACGCGCGAGCAG
GGAATAGGTAAAAGGTAGAAGGGGGCGTATTCGAGGACACAGACGGAGGT
CTCGCGCACTTAGCGGAGAACCAAACCCCGTCTGGAACTGTCTCCCATCC
GACGCGCTTTACATGTGTTCAGGCTCACCACGACATGTTCAGGGACGGCG
TGTTGTGGGGACTGTCGACGATGAGCCGGTCGAATGACGTGATAATCGCG
CGCCTTTGCTCGGTTGCGCTTTGCAATCTAAGCTGCAAGTACTGGAAAGA
TATCGCCACCTCCAACAGCATCAAGGTGGTGGAAAGGAAGACGGAACCAT
TTCGGTTGCCGTCGCTGTCGTCGCACCTACCTTGAATGTCTCGCTTTGGT
GCTGAAACTACGGGGTGGAATGAATCCTTACTTCCGAGATTGAGCAAAGT
GTAGATAGGGCGCTGCAAAAATAATACATTGGGAGCACTGGGTTTCATTT
TGTTTTCCTCAAACGATGTGTTCTCGCCTCGTGATGTTTATTTCTCGGTT
GAAGACGACATCGCTAGCTAGCCTCGTCAGCGACAAACCAGGTGCAAACG
GTGGGTCGCGCACACCGACTCAGGAAATATAACGTAATGTGCCTCGACTA
CGTCTTGGCGTCGAAACCAGACCAACCCGCTGCCCCCGTACTGGCTTGAG
AAATAACAACATAGACACAACCAATACGTGAGTTAGGTTTTCCCTTCCCT
CCCTATCTTCTTCTTCCTCTTTTCGTCGCCGATTTATCATCCCGCTAGGC
TGTGTACTATTTTTCCCGTTCGGACGACGAGGCTGTCATGGGCGCTGGCG
TGAAAACATTGCACAATGTGTTGTTGCGGGCGCAACATCTGGACGGCGTG
GAACACATTTTTGCGAGCGCGGTGGGTGGAAACTTTGTGGCGGCGATCTT
AACCCTCCCCCAAAAACAGCAAAACAACAACCAGAATACTAAGCGTTAGT
GTTTTGGAGGCCTAAAAAACGAGGTTTTCAAATATGACGCTTCTGTCGTC
ATCATTCTGGAGGCTTGGTGGGGGGAAGGGAGTAGGACGATGACACATTC
AGTCACATGGGTCGAGCGTGTCGTTTACGACATTCCTTCAAGGCGACGGG
CCTTTCAAAACCAAATGCTATTTGAGAAATTATATCGAAGGCCCGAGTAT
CCCTCACGCATCAGTAGCAGCGACCACGACATATCCTATTTAGACCAGTC
ATTAAACAACTGCAAGGGTGTGTACGTCACCACATCGTTTGTAGAGTGTT
GCGTGCCGAAACAACACAGCAAAATGTCCCGGAAATAACCCCACCAACAT
GGATCTCATTCTACCCTTCGAGAAAAGTAATAAAATAAGGTTAAAATAGA
ATGGTTAACAACCCTAAACGAGTGGTCAAAATAGATATGGGAACACGTGT
TACAGGTTCCACTCGCCGGGAGAGCCTTGGAGCACATATCGAAGGACGTC
CGGCTGGTGGGCCTGAGGCTAACCCATCTGATTTCTACCACCACGACCTC
TCGAGAGACGGCCATACAACACGGGTTGATGAAACGGGTAGACGTGAAGG
ATTTCGTCAGCGACGAGCGTGAGTGGTTGACGGGACATGCCCCAGTGTAT
TTGCCTGCCGCCACCGCGCGCGGTGGTTCGCGCCCGTGAAAATCAACGGC
GCGTCCCCTTCAACATAGCTCGCGGCGCCCTTGGGTGCGCGCCAAAACCA
AAATGCCTATAATCCTTCAGAGGTTCGACTCTTTGCCACGGTGAAGCGAG
TTGCCGACACGAAGTAATCCAACGCACGCCCATCCAAAGCTGTGGGGAGG
AAAAATTACAGCGGTTATTGCGCGTGATTGTCCCCGACCCCCAGGACGAA
CAACAAAAATATTTTGAAAAGCAGCGTAATCCGTCTTACCCTCGCCCGAA
ACCGCTAGAATTTTTCACGGGTATAGACCCATCCAAAATCGTTCTGGAGA
CTGACTTGTGCATAGAGAACCATCCCCGCATCCGGTATTCGGTCTAAGCC
ACACCCTTCTCCCCATCTCCAAACAAGGCTAGCATTGTGCCACTCCTTCT
GCTGCGCACTGGAGAGATTCGCGCTCGACCCCGCCACCCGCCGCTCCGTG
CTGGACTCGGGCTGCATCATTAGCTTCCCGGCGCTCGGCGCCGTTAGCCC
CCGGATTCTCGAGTGCCTGACGCGATTCCTCTATATCGTCTCCTGCTCGC
CGGAGCACGTGGCGGCTCTGGTGCTGGAGCACGACTGCGTCAAGGTGGCC
GCAGCGGTTGTGGATCAACGCTGCGCTGACGGGACGGGGTCGCCGGACGG
GACGAGGGACATGTGCGCGGCGCTGCTATTCAACCTATCCACGCAGGCAA
GATATTAGGGTCAAAGGAAGTCGGAGAGAGGCTGACGCCGCGCTTGGTAC
GCGGTGATATGTGGCGCCGGTTGTAGTTCCATACCTGCTCGCCACGAAAG
ATCCAGACGAGACACGAGGAGACGTATTCCTTCTACGCACGGGCTTATTT
TTTGTTTTGTTTTGTTTGTTATTTCGGGTGAAACTAGAAACGTATAACTA
CTAATTTCTCGCTCCAATCACCACCCCCCCCCCCCCCGCGCCCCCCCGAT
TCCTCATCCCCCTCCCGCCTCTGATTCCGATACCCCTTCCCATCGCCTTC
TCTCCCTCCCTTACTCCCTTTCTCACGCAGGACGAGGTGAAGACGGAGCT
GGTGATGAAAGGGGCCGTTCAACTAGCCTTCGCGCTGTGGGAAGGAGCCG
GTACAACGGCCCGGCGGAACTGTTCCTTGGTGGCTTGCAATTTGGCCGTG
GGAAAGGTAGCCCCGAAACTCTTTGCCCGCATAAACTCCGCGCGCGCCGA
TAATGTTTGCATCACGACGGTATTCACTTCGAGATCAGTTTGTATTACTG
CAATGGTCGTTGTCGCTCGCGCGAACGTCGAGGAGGAAATAGTTCGGGTG
TATTTCGCGTCGCCACCCAACCTTGCGAAGGTCAATACCGCCAAGATAGT
GCAAAACGGCGCTGGGAAGCTTCTGGTCGAGCTGGTGTCCACCACAGATC
CCGACAAAGACGCGGACGTTCGAAAGAGAGCATCGGCGGCCTTCCGCAAC
CTCCTCTGCGCCTCGGTACGCAAATGAAGGGGGAAAAGGGGCTACAACTT
TCCTTGCATGTCGTTCGCGCCAGCAGCGTGGCGTGGCGTAACTCTTTCTC
ACGGATGCAGGGGAGCCAAGGGAGGGGGGGGGTCCCGTCTAAACGAAGTA
GCGTCTAGGACTTCGGAGAATTTCGCTCTAGACTTGGCCTATTTTGTCAA
TGTTTTCACGTGTACGTATCGGTTTTAGCTCTCCTTGTAGTATCAAGTAA
CCCGTTTTCCGCGGATTATCTCGCCAGTTGATGCCGAGGCTACTCTATTT
TATATATATATACTTTTTATTCGTCATGCTAGATTTGGAGGAAAAAAACA
AAAACAACTTAAACCTGCTTCTCCTCGAAGGCAGATATCCAGCCATACAA
ACATACATCCTTGAGAACGTACAACACGCATATACCCTCGGTGTTCAAAA
TGTCCATGAGAATCGATGTGATTTTGGTACACAGGGAAACCACGTTCAGC
TTGCTCGAGAAGGTGCGATCCCGGCAGTGATGGATTTGGCCGAGACGGAG
TGTCCAGTGGTACGGCGGAACTGCGCGTCGGCGATGAGAAGCATGACGTG
CAAGGCGGATATCCGACAGCTGCTTATCGCGAGCGGGGCCGCCAAGGTCA
TCCTCGACGATGCCAAGACTCAGGTGAAGCCATATGTCTGTTCGGTGATA
AGACAGAGGAATGCGCACCCGATGTACGCTACTTTAATGATACGTTGAGA
GAAAGTCGTCGCCTTGAATTGACTTTCTCGCGTCTCGGGGGTAATCTACG
GTTTCTGGCACGACGAGGACGCTGCTCATTGACGAAGCAAAATACTTTGT
ACTGAATATAGTAAGAGGAGTGTATTCTCCTTCATTATGAAGCAAAGGAC
CGGCTCAGACATTCGACAGGCACAGCAAAGAAAGCTAAGCCATTCTAACG
CAGGGCACGTTTTTCTGTCATCATGTCTTATGACGGACACGAAAAGCGCT
TCGCACAAATATCTTTACACACCGAGATTTGTTAGTTTTGACCATCAGCA
TCCTGCCGTTGGCCACTTCTCACCAAGAAATACAGCCTAGATCGATTGCT
GGTTGCGCTTTTTTTTACCCCTGGGTCTAACCAGTTCTTTCCCCCTTCCC
AAACACGGATGATTCTTTCTGCGCTAGGACGACGACGATAACCTGGTTAT
CGACAACACGCTCCTGTGTGAGATCGAGGCAGAGTCGTGGACCAACGGAA
CGCGAGGAATTCTGGTCGAGTCTCGGGCGCCGCCCCTCATGAAGTTTCAG
CAGAACTGCTCCCTCTTGCCGGCGAACGTCGGCGACCAACAAACCACGAA
TGCTAAGGGGAGGGCTAAGGTTGGGGAGGACGACGATGAGTTGTACAAGA
TGCCGTGGCAGAAATTACAGGTGCAGGAGACCAATCCACACGTCGTGTAG
GAGGTGTCCTTGGCCATCGTGCTTATTGTAAAATACCTAAATAACGGACG
CGTTGCTTTCGTACATTGCGCGAACATGGCTGGATATACCTCAAGCCTAG
GTTTGTCCGTATCAAGCGAGCGTCAGCTACACGCTAGTCGAGCGTCTAGC
AGCCACGCCTCTTAATTTTATCGAGACTCAAGTCGCCAGCAATCTTAAAA
AAGAAAGAGAAAGGTGGATAACGTATCTCCCTCTCCCCCCCTCCCCACCC
CACCTCCTCAGTCGATCCCGCGTGGCATATATCAATCATGCTTGGAACAC
ATAAAACATAGGGATGTATATGCCGTGAGTGAGAGAATCTTTGGCTTTCG
CCGCGAAAGAGGCCTTACGCACACACCCCTCTCCTAACTTCTCTTCATCC
GTCCTCTAAGGCCAAGTCTTCTCTACTTTGGGAACCGAGCGCCTGGATTG
TTCGGCAACTAAACCCGGTGTTTATTATTTTCGACCATCACCGCGGAACG
CCTCCTGCGCATGGGAAGATGCCCTTTCCAAATTAACAATTTCACGTGCG
CCCACGGTTGCTCCTTTCCTCTCGTGCCAACCACTCCAACGTCTACATGC
TCAGGCCCTAGATGTGTCCTTGCAAGAGCCAGACATGGTTATTTCAACGA
AGGGTGCCGGGGCACAGCGACTCGACGGCTCGGGAATAGCGGCGGCCCTT
GCGTGGGACTCTGGGGCGGACGCGCTCGCGGGCTTGGTTTCGTCGACCAG
AGTTCCATGTGGAAAACTGGAGCCA
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Coding sequence (CDS) from alignment at H-elongata_contig11037:2676..8650-

>mRNA_H-elongata_contig11037.855.1 ID=mRNA_H-elongata_contig11037.855.1|Name=mRNA_H-elongata_contig11037.855.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1506bp|location=Sequence derived from alignment at H-elongata_contig11037:2676..8650- (Himanthalia elongata Himel1 dioecious)
ATGTTCAGGGACGGCGTGTTGTGGGGACTGTCGACGATGAGCCGGTCGAA
TGACGTGATAATCGCGCGCCTTTGCTCGGTTGCGCTTTGCAATCTAAGCT
GCAAGTACTGGAAAGATATCGCCACCTCCAACAGCATCAAGATGTTCAGG
GACGGCGTGTTGTGGGGACTGTCGACGATGAGCCGGTCGAATGACGTGAT
AATCGCGCGCCTTTGCTCGGTTGCGCTTTGCAATCTAAGCTGCAAGTACT
GGAAAGATATCGCCACCTCCAACAGCATCAAGGCTGTGTACTATTTTTCC
CGTTCGGACGACGAGGCTGTCATGGGCGCTGGCGTGAAAACATTGCACAA
TGTGTTGTTGCGGGCGCAACATCTGGACGGCGTGGAACACATTTTTGCGA
GCGCGGCTGTGTACTATTTTTCCCGTTCGGACGACGAGGCTGTCATGGGC
GCTGGCGTGAAAACATTGCACAATGTGTTGTTGCGGGCGCAACATCTGGA
CGGCGTGGAACACATTTTTGCGAGCGCGGTTCCACTCGCCGGGAGAGCCT
TGGAGCACATATCGAAGGACGTCCGGCTGGTGGGCCTGAGGCTAACCCAT
CTGATTTCTACCACCACGACCTCTCGAGAGACGGCCATACAACACGGGTT
GATGAAACGGGTAGACGTGAAGGATTTCGTCAGCGACGAGCGTTCCACTC
GCCGGGAGAGCCTTGGAGCACATATCGAAGGACGTCCGGCTGGTGGGCCT
GAGGCTAACCCATCTGATTTCTACCACCACGACCTCTCGAGAGACGGCCA
TACAACACGGGTTGATGAAACGGGTAGACGTGAAGGATTTCGTCAGCGAC
GAGCCATTGTGCCACTCCTTCTGCTGCGCACTGGAGAGATTCGCGCTCGA
CCCCGCCACCCGCCGCTCCGTGCTGGACTCGGGCTGCATCATTAGCTTCC
CGGCGCTCGGCGCCGTTAGCCCCCGGATTCTCGAGTGCCTGACGCGATTC
CTCTATATCGTCTCCTGCTCGCCGGAGCACGTGGCGGCTCTGGTGCTGGA
GCACGACTGCGTCAAGGTGGCCGCAGCGGTTGTGGATCAACGCTGCGCTG
ACGGGACGGGGTCGCCGGACGGGACGAGGGACATGTGCGCGGCGCTGCTA
TTCAACCTATCCACGCAGGCAAGATATTAGCATTGTGCCACTCCTTCTGC
TGCGCACTGGAGAGATTCGCGCTCGACCCCGCCACCCGCCGCTCCGTGCT
GGACTCGGGCTGCATCATTAGCTTCCCGGCGCTCGGCGCCGTTAGCCCCC
GGATTCTCGAGTGCCTGACGCGATTCCTCTATATCGTCTCCTGCTCGCCG
GAGCACGTGGCGGCTCTGGTGCTGGAGCACGACTGCGTCAAGGTGGCCGC
AGCGGTTGTGGATCAACGCTGCGCTGACGGGACGGGGTCGCCGGACGGGA
CGAGGGACATGTGCGCGGCGCTGCTATTCAACCTATCCACGCAGGCAAGA
TATTAG
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