prot_H-elongata_contig110362.854.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110362.854.1
Unique Nameprot_H-elongata_contig110362.854.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
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BLAST of mRNA_H-elongata_contig110362.854.1 vs. uniprot
Match: A0A6H5KPG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG2_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.220e-21
Identity = 42/53 (79.25%), Postives = 49/53 (92.45%), Query Frame = 0 
Query:    1 AELFYRRALAANDLDPLVLANFRSFCLERLPNGAYPGGGPGSRVLKRSRLEEE 53
            AE+FYRRA+AANDLDP VLAN++SFC+ERLP G YPGGGPGSRVL+RSRL+ E
Sbjct:  475 AEMFYRRAIAANDLDPHVLANYKSFCMERLPGGRYPGGGPGSRVLRRSRLDGE 527
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BLAST of mRNA_H-elongata_contig110362.854.1 vs. uniprot
Match: D7FZX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX1_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 8.250e-21
Identity = 40/52 (76.92%), Postives = 48/52 (92.31%), Query Frame = 0 
Query:    2 ELFYRRALAANDLDPLVLANFRSFCLERLPNGAYPGGGPGSRVLKRSRLEEE 53
            +LFYRRA+AANDLDP VLAN++SFC+ERLP G YPGGGPGSR+L+RSRL+ E
Sbjct: 1763 QLFYRRAIAANDLDPHVLANYKSFCMERLPGGLYPGGGPGSRILRRSRLDGE 1814
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110362.854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPG2_9PHAE1.220e-2179.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZX1_ECTSI8.250e-2176.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110362contigH-elongata_contig110362:472..636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110362.854.1mRNA_H-elongata_contig110362.854.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110362 472..636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110362.854.1 ID=prot_H-elongata_contig110362.854.1|Name=mRNA_H-elongata_contig110362.854.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
AELFYRRALAANDLDPLVLANFRSFCLERLPNGAYPGGGPGSRVLKRSRL
EEEK*
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