mRNA_H-elongata_contig110348.853.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 178 bits (451), Expect = 3.880e-52 Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 1
Query: 1 RQVDLNLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAGFVSPLDVSPDGQ--EPGEFRDSEEA 300
+QVDLNLDFEEL+DV YL NGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRL HPNIV+MLGAGFV+PLDV PDG E GEFRD ++A
Sbjct: 34 QQVDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQA 135
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.070e-18 Identity = 38/70 (54.29%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 25 FEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAGF 234
+E+LK++ Y+ G MC IY+AE+RG +VVVK+PRDDC PE+A DLE E+++L LDH +I+ +LGAG
Sbjct: 137 WEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGL 206
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: A0A6V1S4W8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S4W8_HETAK) HSP 1 Score: 82.8 bits (203), Expect = 2.890e-16 Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 1 RQVDLNLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAGF 234
++VD +L + L D +LANGG C+IYTA+++ VVVKM +DD E AR DLE E+ L RL HPN+V++ GAGF
Sbjct: 216 KEVDTDLSWALLDDARFLANGGFCTIYTAQFKHLPVVVKMLKDDRLDMEAARADLEAEMHFLLRLRHPNVVEIYGAGF 293
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: K0R303_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R303_THAOC) HSP 1 Score: 73.9 bits (180), Expect = 3.760e-13 Identity = 34/76 (44.74%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 7 VDLNLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAGF 234
LNL ++ L++V YL +GG I+TA ++G+ VVVK + +C +A K++E+E++I RLDHPNI ++GAGF
Sbjct: 438 AQLNLQWDSLRNVEYLTDGGNAWIHTAVFQGKSVVVKTIKPECQDVALAIKEIESELEIHSRLDHPNICKLVGAGF 513
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: A0A7S3XVQ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVQ2_HETAK) HSP 1 Score: 70.9 bits (172), Expect = 5.960e-13 Identity = 32/72 (44.44%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 16 NLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAG 231
N++++ L++V +LA GGMC + +A G V+K+ RDD A PEV + L+ EI +L+RL HPN+V G+G
Sbjct: 83 NMEWDRLENVEFLAQGGMCRVLSATLHGVPCVIKIGRDDHANPEVVKLSLKDEITVLRRLKHPNVVGYYGSG 154
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: A0A1Z5KHW2_FISSO (Protein kinase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHW2_FISSO) HSP 1 Score: 72.4 bits (176), Expect = 1.260e-12 Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 1
Query: 7 VDLNLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAG 231
+LNL + +L++V YL +GG I+TA +R + VVVK + +C VA ++E E+DI RL HPNIVD+LGAG
Sbjct: 357 AELNLQWRQLQNVEYLTDGGNSWIHTAVFRDKPVVVKTLKPECQDVVVAINEMEGELDIHSRLQHPNIVDLLGAG 431
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: A0A7S2LY51_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY51_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.790e-12 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 7 VDLNLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAGF 234
LNL +E L++V YL +GG I+TA +G+ VVVK + +C +A ++E E++I RLDHPNIV ++GAGF
Sbjct: 480 AQLNLQWESLRNVEYLTDGGNNWIHTAVLQGKSVVVKTLKPECQDVALAINEIEGELEIHSRLDHPNIVKLIGAGF 555
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: A0A7S3DX07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DX07_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.370e-10 Identity = 31/76 (40.79%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 13 LNLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAGFVS 240
L+L + +L++V YL +GG I+TA ++GR VVVK + +C +A ++E E+++ +L+HPNIV ++GAG S
Sbjct: 408 LDLQWRQLQNVEYLTDGGNSWIHTAVFQGRPVVVKTLKPECQDVALAINEIEAELEVHSKLNHPNIVGLIGAGTTS 483
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: A0A7S4EJ08_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJ08_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.610e-10 Identity = 31/76 (40.79%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 13 LNLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAGFVS 240
L+L + +L +V YL +GG I+TA + G+ VVVK R +C +A ++E E+ + RL+HPN+V ++GAG+ S
Sbjct: 502 LDLQWCQLHNVEYLTDGGTSWIHTAIFDGKPVVVKTLRPECQDTSIAINEIEAEVGVHSRLNHPNVVTLIGAGWTS 577
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Match: A0A7S2EVB1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVB1_TRICV) HSP 1 Score: 63.5 bits (153), Expect = 2.650e-10 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 13 LNLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLDHPNIVDMLGAGFVS 240
L+L + L++V YL +GG I+TA GR VVVK + +C +A ++E E++I +LDHPNIV ++GAG S
Sbjct: 29 LDLRWNALRNVEYLTDGGNNWIHTAVMDGRPVVVKTLKPECQDLALAINEIEGELEIHSKLDHPNIVTLMGAGTTS 104 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110348.853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig110348.853.1 >prot_H-elongata_contig110348.853.1 ID=prot_H-elongata_contig110348.853.1|Name=mRNA_H-elongata_contig110348.853.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp RQVDLNLDFEELKDVHYLANGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVback to top mRNA from alignment at H-elongata_contig110348:83..980- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig110348.853.1 ID=mRNA_H-elongata_contig110348.853.1|Name=mRNA_H-elongata_contig110348.853.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=898bp|location=Sequence derived from alignment at H-elongata_contig110348:83..980- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig110348:83..980- >mRNA_H-elongata_contig110348.853.1 ID=mRNA_H-elongata_contig110348.853.1|Name=mRNA_H-elongata_contig110348.853.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=636bp|location=Sequence derived from alignment at H-elongata_contig110348:83..980- (Himanthalia elongata Himel1 dioecious)back to top |