mRNA_H-elongata_contig11032.852.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11032.852.1
Unique NamemRNA_H-elongata_contig11032.852.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A6H5K9J8_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9J8_9PHAE)

HSP 1 Score: 565 bits (1456), Expect = 4.040e-184
Identity = 343/612 (56.05%), Postives = 411/612 (67.16%), Query Frame = 1 
Query:    1 YEVFEVSKLGDLRRTSVTLGEVLQDFGVHARDVLSLGIQDERYNPPPAVLPRDGVIVIALGSFKALVHTEACLLFEAGKTDVSHVAPVFAELMQANAQEPRSASMGGAMDEGGSRNNNAKALGSSREDLCELGKEGISHPRGARDGPESAARLP----------------------------------SSSPTTVTRNSP--GVVQGSSEVKASQEDGQEGAPVGGRTTQRSGFVSRIGEYVGT-------------LGFRKYEK----VDEKPEEDVRE--NQMKVVFEEQQPIPFELAMLEAMLQEVIESYYRRAHVVRRLMEHRLKPNDITSLFNPNRVEYYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTEAKELAQGELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNVVSGLESSHVAFYALLGGTVAACTAGLAGVMRHLSRSVARSGDSQQGQLMALNTICDHVDDIEIVLRTELESGRNTNTDEAGYGLINRSAMAKKLAHARGKEVSNLELDLIFAAFDTTGDGAIDTKEYGKLVTQSTASL 1671
            +EVFEVSK G L+RTS+TL +VL++FGVHARDVLSLG+QDER+NPPPAVLPR+GV+V+ALG FKALVHTEAC+LFEA K DVS++AP+ A+L+QAN  E R+A +  + D    RN    A                               +                                   SSSP T     P  G  Q S+    ++ +G E A             ++ G+YV               L  +K +K    + ++ EE+  E  +QMKV+F EQ P+PFELAMLE MLQEV  SY+RRAH+VRRLME  LKP++ TS F P+R+E+YR+VPLKLAL+QLELKLSQTRACLEEL+ SDEDMLGLLLTEAKEL  G++LD  RHSVVELLLENYHRQLVLV HDVAAMK E+ES+QEL+AISLDVS NSMI VD+RL+MLNLGVA+SAC+FGAMGMN ++GLESSHV FY LL G+ AA    L GVMRHL RSV R+GDSQQG+LMALNTICDHVDDIE VLRTELE G+     +   G I R AMA+KLA  RGKEVS  ELDLIFA FDT+GDG+IDTKEYG+LV+    SL
Sbjct:   65 FEVFEVSKAGGLKRTSITLADVLRNFGVHARDVLSLGLQDERFNPPPAVLPREGVVVVALGPFKALVHTEACVLFEAEKIDVSYIAPILADLVQAN-NEARAAEVPPSEDV---RNPATSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSSPETRLGLQPSAGAPQTSTATARTRAEGDESAA--------DKLAAKFGDYVQEAYRFGAGVASSEELWGKKRDKDAAALQDEGEEEAEEEHHQMKVMFREQLPMPFELAMLEVMLQEVCTSYHRRAHIVRRLMEQGLKPSETTSFFAPSRIEHYRLVPLKLALKQLELKLSQTRACLEELMQSDEDMLGLLLTEAKELRNGQMLDAHRHSVVELLLENYHRQLVLVGHDVAAMKQEMESLQELSAISLDVSLNSMIAVDVRLAMLNLGVATSACIFGAMGMNTINGLESSHVGFYCLLVGSAAASAMALGGVMRHL-RSVVRAGDSQQGKLMALNTICDHVDDIETVLRTELEFGQ-----KIAAGAIKRDAMARKLARTRGKEVSEEELDLIFAVFDTSGDGSIDTKEYGELVSDPAGSL 658
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A836C9F9_9STRA (Magnesium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F9_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.510e-69
Identity = 184/549 (33.52%), Postives = 275/549 (50.09%), Query Frame = 1 
Query:   55 LGEVLQDFGVHARDVLSLGIQDERYNPPPAVLPRDGVIVIALGSFKALVHTEACLLFEAGKTDVSHVAPVFAELMQANAQEPRSASMGGAMDEGGSRNNNAKALGSSREDLCELGKEGISHPRGARDGPESAARLPSSSPTTVTRNSPGVVQGSSEVKASQEDGQEGAPVGGRTTQRSGFVSRIGEYVGTLGFRKYEKVDEKPEEDVRENQMKVVFEEQQPIPFELAMLEAMLQEVIESYYRRAHVVRRLMEHRLKPNDITSLFNPN-RVEYYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTEAKELAQGELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNVVSGLESSHVAFYALLGGTVAACTAGLAGV------MRHLSRSVARSGDSQQGQLMALNTICDHVDDIEIVLRTELESGRNTNTDEAGYG-----------LINRSAMAKKLAHARGKEVSNLELDLIFAAFDTTGDGAIDTKEYGKL 1647
            + +VL+ FGVHARD++SLG+    + PPPA+LPR  VIV+A+G  KAL++  +CL+FEA K  V+ V    AELM+ N                                 C+   E    P    D  E+     +S+                   A  E                    +  +  G               +++   Q    ++ +QP+PFELAMLEAMLQE   S  RR  ++R L+   L     +S    N R+++Y++VP+ +AL+  EL  ++ R CL +LLH+D+DML L+LT   EL  GE+LD  RH  VELLLENYHRQL + +++++ +  E++S QELA I+LD+SRN M+ ++I+L+M+N+ VA  A +FG  GMNV +G+E +  A   ++G  +A+    L G       MR + RS+   G+S++  L  L  I   + +IE V+R+ LE    + +  A  G            ++R+AM   L    G  V++ ELDLIF  FDT  DG I   +Y  L
Sbjct:    1 MSDVLRRFGVHARDIISLGLDSSSWTPPPAILPRGNVIVVAIGHLKALIYHNSCLVFEAKKPVVAAVTCELAELMRLN---------------------------------CQQATEEPQEPHAPPDAAEAVEDGDASAQXXXXXXXXXXXXXXXXXXARTEKXXXXXXXXXXXXXXXXXXQQDSD-AGXXXXXXXXXXXXXQGDNMMLQQW---YQMRQPVPFELAMLEAMLQEYCNSQQRRLRLMRHLVADTLTRATTSSTTLGNARIDFYKMVPINVALKNFELSTAEARRCLTDLLHNDDDMLDLMLTAKHELGPGEMLDETRHQEVELLLENYHRQLSITQNEISKLVQEVQSTQELAGINLDISRNRMLHMEIQLAMMNVSVACCAAIFGVFGMNVANGIEHTEHALPGVVGLGLASGGI-LYGAWYMYMRMRVVRRSLLDEGESKE--LHTLGRIFGDLSNIETVIRSTLELQAGSGSGNATGGGDRQGRLTSSTPLDRAAMRTLLEEETGHRVNDAELDLIFRLFDTKADGWIGASDYKDL 509
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A7S4HRH7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HRH7_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.740e-34
Identity = 104/311 (33.44%), Postives = 174/311 (55.95%), Query Frame = 1 
Query:  721 PFELAMLEAMLQEVIESYYRRAHVVRRLMEHRLKPNDITSLFNPNRVEYYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTE-AKELAQGELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNVVSGLESSHVAFYALLGGTVAACTAGLAGVMRHLSRSVARSGDSQQGQLMALNTICDHVDD---IEIVLRTELESGRNTNTDEAGYGLINRSAMAKKLAHARGK-EVSNLELDLIFAAFDTTGDGAIDTKEY 1638
            PFEL  +E +L++  +++ RR  V   +++          +F+   V+  ++VP+K +L+  EL + Q   CL  LL +DEDMLGLLLTE AK  ++GE L    H  VELL E Y RQL  V H+V  ++  ++S QEL A+SLD  RN MI +++ LS++ +G+AS+  V G  GMN+++G E+S  A+ A++ GT       +AG   +LS +  R   +Q+  L  + TI   + D   ++  ++  ++ G+           +N++A +  L  +R   +V   E+D++F   D + DG I T+++
Sbjct:   52 PFELVFIEEVLRDACDTFNRRLRVYEPIVD-TFMSRTTNEVFSDAGVQ--KLVPIKDSLQDFELTVKQCLECLTHLLGNDEDMLGLLLTEKAKASSKGEHLRHEMHEAVELLFEEYARQLSNVLHEVHFLQRRVQSKQELVALSLDAYRNRMIRMNVYLSIVGIGLASATTVAGFYGMNLINGHENSATAYDAVVAGTSLTALLIVAGCTSYLSGNTMRKRAAQR--LEEIETISGALSDMAALDYTIKVMVDQGKP----------MNKTAFSHHLRESRHSGDVMEREVDMLFDVLDISQDGKIYTEDF 347
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A8J2SNL6_9STRA (Magnesium transporter n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNL6_9STRA)

HSP 1 Score: 141 bits (355), Expect = 5.220e-32
Identity = 107/308 (34.74%), Postives = 174/308 (56.49%), Query Frame = 1 
Query:  724 FELAMLEAMLQEVIESYYRRAHVVRRLMEHRLKPNDITSLFNPNRVE-YYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTEAKELAQGELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNVVSGLESSHVAFYALLGGTV---AACTAGLAGVMRHLSRSVARSGDSQQGQLMALNTICDHVDDIEIVLRTELESGRNTNTDEAGYGLINRSAMAKKLAHARGKEVSNLELDLIFAAFDTTGDGAIDTKE 1635
            FELA+LEA+L EV  S+ RR  +   +++ +L+  + +  F+   V+  +R+     AL   E +  Q    L+ELL SDEDMLGLLL+E +    G  +DP RH VVELLLE YHR+L  V  DVA ++ ++++  EL  +++D++RN++I+ ++ LSM  +G+A++  + G  GMN+VSG+E + +AF A+  G+    AA  AG    MR   +S+ +          AL ++  ++  +E V             D+A   L  R A+A +L  A GK+ S  E++++F  FD + +  I  +E
Sbjct:  133 FELAVLEAVLAEVSSSFQRRRDLYEPVVQKQLR--EASCEFDGFGVDGLHRLSAFDGALMSFEAETRQALQVLDELLASDEDMLGLLLSERR---AGTSVDPERHGVVELLLEAYHRRLSAVAGDVAELRGKVQAATELGRVTIDLNRNNIIKFNLYLSMSAVGLAATTSIAGIFGMNLVSGIEEAPLAFGAVTAGSGLVGAAVVAGFHAAMRS-QKSIEQRARHAADDREALTSLLANMATVENVF------------DDACRDLT-RPAIAARLEAATGKKPSEREVEILFDIFDASHNDKISLRE 421
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A7S2XSC1_9STRA (Magnesium transporter n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSC1_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.610e-30
Identity = 102/316 (32.28%), Postives = 170/316 (53.80%), Query Frame = 1 
Query:  721 PFELAMLEAMLQEVIESYYRRAHVVRRLMEHRLK--PNDITSLFNPNRVEYYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTEAKELAQ-GELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNVVSGLESSHVAFYALLGGTV-------AACTAGLAGVMRHLSRSVARSGDSQQGQLMALNTICDHVDDIEIVLRTELESGRNTNTDEAGYGLINRSAMAKKLAHARGKEVSNLELDLIFAAFDTTGDGAIDTKEY 1638
            PFEL  +E +L EV  S+ RR  +   +++  L    N++ S         +R+VP+K +L++ E+ + Q   CL  LLHSDEDM+ L+LTE     + G  +D  +H+ VELLLE Y RQL  +  ++  +   ++S QEL +ISLD  RN MI +++ +S++ +G+A S  V G  GMN+++GLE S  AF +++  T+       AACT+ L+G  R   R++ R  + +      L +    ++ ++ V +  +ESGR     E            K +A     EV + E+D +F   D + +G + T+++
Sbjct:  156 PFELVFIEEVLCEVCSSFNRRIRLYEPIVDSLLSRVSNEVLSESG-----VHRLVPVKDSLQEFEMVVKQAVECLSHLLHSDEDMVELMLTEKIHAQRDGIEVDVDKHTHVELLLEEYARQLNDILQEINFLLRRVQSKQELVSISLDAYRNRMIRMNVYVSIVGMGLAVSTTVAGYFGMNLINGLEQSPTAFSSVVVATIVGSIFLTAACTSYLSGA-RMRQRAIQRLDEIE-----TLTSALSDMNSLDYVAKCMVESGRPMGKQEF---------KGKLVATRSSGEVPDKEVDFLFDVLDISHNGKLYTEDF 451
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A6S8XKU5_9STRA (Magnesium transporter n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XKU5_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.380e-27
Identity = 97/312 (31.09%), Postives = 167/312 (53.53%), Query Frame = 1 
Query:  724 FELAMLEAMLQEVIESYYRRAHVVRRLMEHRLKPNDITSLFNPNRVE--YYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTEAKELA-QGELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNVVSGLESSHVAFYALLGGTVAACTAGLAGVMRHLSRSVARSGD-SQQGQLMALNTICDHVDDIEIVLRTELESGRNTNTDEAGYGLINRSAMAKKLAHARGKEVSNLELDLIFAAFDTTGDGAIDTKEYGKL 1647
            FEL  LE +L++V+ +Y RR  +   +++       +T + N        +R+VP+K +L + E+++     CL  LL ++EDMLGLLLTE +    +GE +D  RH  VELLLE Y RQL  +  +   +  +++S QEL AISLD  RN M+ +++ LS+  +G+ S+    G  GMN+VSGLE    AF +++ GT         G + ++S S A+S   S+  +L+ L     +++ ++ VL+  +E      T++       +  M        G  ++  E+DL+F + D + +G ++  ++  L
Sbjct:  275 FELIFLEEILKDVVTTYNRRLILYEPIVD-----TVVTKVSNEMSAASGVHRLVPVKDSLLEFEIQVESALNCLTHLLGNEEDMLGLLLTERQAARDRGEEMDIRRHEDVELLLEEYARQLSYILAETNYLLKKVQSKQELVAISLDAYRNRMLRMNLYLSIAGVGIGSATAAAGYFGMNLVSGLEDHPAAFGSVVTGTTLFALLFGVGCVSYISGSAAQSRTLSRLRELVVLEGALKNLNALDFVLKRLVEE---RTTEQVSKDSFQQRMMDS--GEITGGVMTAEEIDLLFDSMDMSQNGTLEADDFRSL 576
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A7S4UL45_9STRA (Magnesium transporter n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UL45_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.960e-27
Identity = 99/310 (31.94%), Postives = 166/310 (53.55%), Query Frame = 1 
Query:  721 PFELAMLEAMLQEVIESYYRRAHVVRRLMEHRLKPNDITSLFNPNRVEYYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTE-AKELAQGELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNVVSGLESSHVAFYALLGGTVAACTAGLAGVMRHLSRSVARSGDSQQGQLMALNTICDHVDDIEIVLRTELESGRNTNTDEAGYGLINRSAMAKKLAHARGKEVSNLELDLIFAAFDTTGDGAIDTKEYGKL 1647
            PFEL  +E +L++  +++ RR  +   +++  L       +F+ + V  +R+VP+K +L++ E+ + Q   CL+ LL +DEDMLGLLLTE A   ++G+ L   +H  VELLLE Y RQ   +  ++  +   ++S QEL A+SLD  RN MI +++ +S+  +G+A+S  V G  GMN+VSG+E S VAF  ++  T  A      G + ++S S  R      G+L  +  I   + D+   L    +S     T         +    +K  +AR  ++ + E+DL+F   D   DG I  +++  +
Sbjct:  249 PFELVFIEEILRDACDTFNRRIRLYEPIVDS-LLDRVSNEVFSESGV--HRLVPIKDSLQEFEMTVKQGLDCLKHLLDNDEDMLGLLLTEGAAARSKGQNLQLKKHESVELLLEEYARQFNGILQEIHYLLQRVQSKQELVALSLDGYRNRMIRMNLYMSIAAVGLATSTTVAGYFGMNLVSGMEESGVAFQYVIVSTTLASLGIFGGSLSYISGS--RMKKRAMGRLEEIEAIKGALSDMN-ALDYAAKSMIQNETPMCRTDFKQKLLEGRKYNNAR--QLKDDEVDLLFDVLDKNMDGNIYMEDFSAI 550
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A2R5GXE5_9STRA (Magnesium transporter n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GXE5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 4.480e-25
Identity = 101/326 (30.98%), Postives = 163/326 (50.00%), Query Frame = 1 
Query:  703 EEQQPIPFELAMLEAMLQEVIESYYRRAHVVRRLME---HRL--KPNDITSLFNPNRVEYYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTEAKELAQGELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNVVSGLESSHVAFYAL-LGGTVAACTAGLAGVMRHLSRSVARSGDSQQGQLMA-LNTICDHVDDIEIVLRTELESGRNTNTDEAGYGLINRSAMAKKLAHARGKEVSNLELDLIFAAFDTTGDGAIDTKEYGKLVTQS 1659
            EE   +PFEL  LE +L  +  +YY R  ++  L++   H L  +P D   L        ++++P+K  L Q E++ + TR  L E+LH++EDML +LL+E      G L    RH  VELLLENY  QL+ +  +   ++  +ES Q +  + LD  RN+M+ V I +++ +  ++    + G  G N+V+ LE    AFY L L  +V+ C     GV   + R +       +GQ    L++I  H+++I+ +L     S R T     G   + R+ +   L    G  +S  +L +I+  FD   DG I+  E  K +  S
Sbjct:  323 EEGAQLPFELRALEGVLSHLCSTYYNRTRLLSPLVKSVLHTLSSRPVDPEVL--------HQLLPMKDTLSQFEIETTLTRNVLTEVLHNEEDMLAMLLSETY-ANSGVLPKRERHETVELLLENYCSQLIDISQEAYYLRKRVESTQSIIELRLDTYRNNMLRVSINIALASCALSLGTAISGIFGANLVNHLEDHPTAFYWLVLFSSVSVC-----GVFFGMRRKI------PEGQAGGNLDSIFIHLEEIQQILSVA-RSRRRT-----GMRSLTRAELKAMLQKIAGVNISEEDLTIIWKTFDLDKDGTIEPGEIDKAILSS 622
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A813IX34_POLGL (Magnesium transporter (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IX34_POLGL)

HSP 1 Score: 113 bits (283), Expect = 1.390e-22
Identity = 74/180 (41.11%), Postives = 103/180 (57.22%), Query Frame = 1 
Query:  718 IPFELAMLEAMLQEVIESYYRRAHVVRRLMEHRLKPNDITSLFNPNRVEYYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTEAKELAQGELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNV 1257
            +PFEL +LE  L+++ ES+ RRA + R L E  L    + S          RVV LK AL   EL +    A L+ELL SDEDM+GL+++  +         P +H  VELLLENYHRQL L   DV +M   ++S QEL AISL V RN ++ ++++L +  + +     V G +GMNV
Sbjct:  207 LPFELMVLEEALRDICESFRRRAGLYRPLAESLLNGLSVASAEQG----LQRVVVLKDALGDFELAVKDMVALLKELLDSDEDMVGLVVSHGR--------TPSQHEDVELLLENYHRQLTLTLQDVVSMLRLVQSKQELLAISLSVYRNRLVRMNVQLGVAGVSIGICTMVAGFLGMNV 374
[Close]
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Match: A0A8J5XMT7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XMT7_DIALT)

HSP 1 Score: 108 bits (270), Expect = 2.270e-20
Identity = 92/265 (34.72%), Postives = 137/265 (51.70%), Query Frame = 1 
Query:  721 PFELAMLEAMLQEVIESYYRRAHVVRRLMEHRLKPNDIT----SLFNPNRVEYYRVVPLKLALRQLELKLSQTRACLEELLHSDEDMLGLLLTEAKELAQGELLDPIRHSVVELLLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSMLNLGVASSACVFGAMGMNVVSGLESSHVAFY-------ALLGGTVAACTAGLAGVMRHLSRSVARSGDSQQG---QLMA---LNTICDHVDDIEIVLRTEL 1464
            PFE+  L+ +L+EV  SY RRA ++  +++  L+   +     S       +   ++PL+ +L   EL  S+  + L +LL SDEDML +LLTE K   +G+      H  VELLLE Y RQ+  V  +  A+K  + S  ELA + LD+SRN M+  ++ LSM++  +A      G  GMN+ SGLE+   AF        AL G  +AAC + L G          R G +QQ    QL A   + T+   +D ++ VL  +L
Sbjct:  196 PFEMRALDLLLEEVTASYARRAALLSPMVDSLLERMVVEAAPYSAAGLGLSDVSILIPLRDSLNTFELDASKLVSVLVDLLDSDEDMLDMLLTE-KATLRGQRPPAAHHEAVELLLEEYVRQMASVLTEAQALKKRVASASELAQLHLDISRNRMVATNVHLSMVSTALAVVMTASGVFGMNLHSGLETDASAFQIVTASSSALGGCMLAACWSYLHGF---------RGGHTQQQLSLQLQAASAIRTVFRKLDSLQYVLAHKL 450
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11032.852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9J8_9PHAE4.040e-18456.05EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836C9F9_9STRA1.510e-6933.52Magnesium transporter n=1 Tax=Tribonema minus TaxI... [more]
A0A7S4HRH7_9STRA2.740e-3433.44Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A8J2SNL6_9STRA5.220e-3234.74Magnesium transporter n=1 Tax=Pelagomonas calceola... [more]
A0A7S2XSC1_9STRA3.610e-3032.28Magnesium transporter n=2 Tax=Attheya septentriona... [more]
A0A6S8XKU5_9STRA1.380e-2731.09Magnesium transporter n=1 Tax=Chaetoceros debilis ... [more]
A0A7S4UL45_9STRA1.960e-2731.94Magnesium transporter n=4 Tax=Ditylum brightwellii... [more]
A0A2R5GXE5_9STRA4.480e-2530.98Magnesium transporter n=1 Tax=Hondaea fermentalgia... [more]
A0A813IX34_POLGL1.390e-2241.11Magnesium transporter (Fragment) n=3 Tax=Polarella... [more]
A0A8J5XMT7_DIALT2.270e-2034.72Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11032contigH-elongata_contig11032:871..8007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score591.7
Seed ortholog evalue3.8e-166
Seed eggNOG ortholog2880.D8LPU8
Preferred nameMRS2
KEGG rclassRC00537,RC00983
KEGG koko:K01053,ko:K12765,ko:K16075
KEGG TC1.A.35.5
KEGG ReactionR01519,R02933,R03751
KEGG Pathwayko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko04113,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220,map04113
KEGG ModuleM00129
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006089,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0008150,GO:0008152,GO:0008324,GO:0009987,GO:0015075,GO:0015095,GO:0015318,GO:0015693,GO:0016020,GO:0016021,GO:0019752,GO:0019866,GO:0022857,GO:0022890,GO:0030001,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032787,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045016,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071704,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1901615,GO:1903830,GO:1990542
EggNOG free text desc.magnesium ion transmembrane transporter activity
EggNOG OGsKOG2662@1,KOG2662@2759
EC2.7.11.1,3.1.1.17
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioninner membrane magnesium transporter
Ec32 orthologEc-18_002560.1
Exons11
Model size3658
Cds size1713
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11032.852.1prot_H-elongata_contig11032.852.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11032 871..6062 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929630.1081553-CDS-H-elongata_contig11032:870..9871622929630.1081553-CDS-H-elongata_contig11032:870..987Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 871..987 +
1691679098.1580052-CDS-H-elongata_contig11032:870..9871691679098.1580052-CDS-H-elongata_contig11032:870..987Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 871..987 +
1622929630.1252117-CDS-H-elongata_contig11032:1557..17341622929630.1252117-CDS-H-elongata_contig11032:1557..1734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 1558..1734 +
1691679098.1742306-CDS-H-elongata_contig11032:1557..17341691679098.1742306-CDS-H-elongata_contig11032:1557..1734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 1558..1734 +
1622929630.143685-CDS-H-elongata_contig11032:2019..24841622929630.143685-CDS-H-elongata_contig11032:2019..2484Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 2020..2484 +
1691679098.18493-CDS-H-elongata_contig11032:2019..24841691679098.18493-CDS-H-elongata_contig11032:2019..2484Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 2020..2484 +
1622929630.159224-CDS-H-elongata_contig11032:2859..30241622929630.159224-CDS-H-elongata_contig11032:2859..3024Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 2860..3024 +
1691679098.1934874-CDS-H-elongata_contig11032:2859..30241691679098.1934874-CDS-H-elongata_contig11032:2859..3024Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 2860..3024 +
1622929630.1786728-CDS-H-elongata_contig11032:3324..34141622929630.1786728-CDS-H-elongata_contig11032:3324..3414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 3325..3414 +
1691679098.2018447-CDS-H-elongata_contig11032:3324..34141691679098.2018447-CDS-H-elongata_contig11032:3324..3414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 3325..3414 +
1622929630.1976893-CDS-H-elongata_contig11032:3914..40311622929630.1976893-CDS-H-elongata_contig11032:3914..4031Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 3915..4031 +
1691679098.213092-CDS-H-elongata_contig11032:3914..40311691679098.213092-CDS-H-elongata_contig11032:3914..4031Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 3915..4031 +
1622929630.2149217-CDS-H-elongata_contig11032:4406..45211622929630.2149217-CDS-H-elongata_contig11032:4406..4521Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 4407..4521 +
1691679098.2210712-CDS-H-elongata_contig11032:4406..45211691679098.2210712-CDS-H-elongata_contig11032:4406..4521Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 4407..4521 +
1622929630.2307227-CDS-H-elongata_contig11032:4775..48871622929630.2307227-CDS-H-elongata_contig11032:4775..4887Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 4776..4887 +
1691679098.2286954-CDS-H-elongata_contig11032:4775..48871691679098.2286954-CDS-H-elongata_contig11032:4775..4887Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 4776..4887 +
1622929630.2492285-CDS-H-elongata_contig11032:5081..51271622929630.2492285-CDS-H-elongata_contig11032:5081..5127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 5082..5127 +
1691679098.2420151-CDS-H-elongata_contig11032:5081..51271691679098.2420151-CDS-H-elongata_contig11032:5081..5127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 5082..5127 +
1622929630.2672055-CDS-H-elongata_contig11032:5426..55821622929630.2672055-CDS-H-elongata_contig11032:5426..5582Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 5427..5582 +
1691679098.2533016-CDS-H-elongata_contig11032:5426..55821691679098.2533016-CDS-H-elongata_contig11032:5426..5582Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 5427..5582 +
1622929630.2821076-CDS-H-elongata_contig11032:5909..60621622929630.2821076-CDS-H-elongata_contig11032:5909..6062Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 5910..6062 +
1691679098.2713614-CDS-H-elongata_contig11032:5909..60621691679098.2713614-CDS-H-elongata_contig11032:5909..6062Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11032 5910..6062 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929630.303875-UTR-H-elongata_contig11032:6062..80071622929630.303875-UTR-H-elongata_contig11032:6062..8007Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11032 6063..8007 +
1691679098.279004-UTR-H-elongata_contig11032:6062..80071691679098.279004-UTR-H-elongata_contig11032:6062..8007Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11032 6063..8007 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11032.852.1

>prot_H-elongata_contig11032.852.1 ID=prot_H-elongata_contig11032.852.1|Name=mRNA_H-elongata_contig11032.852.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=571bp
YEVFEVSKLGDLRRTSVTLGEVLQDFGVHARDVLSLGIQDERYNPPPAVL
PRDGVIVIALGSFKALVHTEACLLFEAGKTDVSHVAPVFAELMQANAQEP
RSASMGGAMDEGGSRNNNAKALGSSREDLCELGKEGISHPRGARDGPESA
ARLPSSSPTTVTRNSPGVVQGSSEVKASQEDGQEGAPVGGRTTQRSGFVS
RIGEYVGTLGFRKYEKVDEKPEEDVRENQMKVVFEEQQPIPFELAMLEAM
LQEVIESYYRRAHVVRRLMEHRLKPNDITSLFNPNRVEYYRVVPLKLALR
QLELKLSQTRACLEELLHSDEDMLGLLLTEAKELAQGELLDPIRHSVVEL
LLENYHRQLVLVEHDVAAMKHELESMQELAAISLDVSRNSMIEVDIRLSM
LNLGVASSACVFGAMGMNVVSGLESSHVAFYALLGGTVAACTAGLAGVMR
HLSRSVARSGDSQQGQLMALNTICDHVDDIEIVLRTELESGRNTNTDEAG
YGLINRSAMAKKLAHARGKEVSNLELDLIFAAFDTTGDGAIDTKEYGKLV
TQSTASLTNQGRGGNLPKSL*
back to top

mRNA from alignment at H-elongata_contig11032:871..8007+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11032.852.1 ID=mRNA_H-elongata_contig11032.852.1|Name=mRNA_H-elongata_contig11032.852.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7137bp|location=Sequence derived from alignment at H-elongata_contig11032:871..8007+ (Himanthalia elongata Himel1 dioecious)
TACGAGGTTTTCGAGGTGAGTAAATTGGGCGACCTCAGGCGAACGAGCGT
CACCCTCGGCGAAGTGCTCCAGGACTTCGGGGTTCACGCTCGAGATGTCC
TGTCGCTCGGAATACAGGTGCAGTCACTTGACATTGAAATTTGCCTCACG
ACACCCGAAAATAATTTTTTGAGTGTCCAGCAAAAAATATTTTTCCTCTG
TGGCGGTGTGGCGGAGCTTTTACGTCCGAAGTAACAATCTCCGAACAGAC
TGTGTACTACGGGGAATACCGCCAATCTATGGTGAATGGAGGAGATGCAA
GCATTCTGCCTCGTCTTCGATTCACAAACTTGAATGTAACGAAGTCTCAA
GACACGCAGGCCAGGCCATCTTTGGTCAAGTAATCGGTCGATCACGTACT
TCTAGAGCTAAATCAGATCGTGATACAGCTATACTCTACTCTACTCTAGT
GGCTTAAGGCTATATGCTCTTGCTCTTGATCTTTCCCCTTAATTCATTTC
GTTTGATTGAAACCTCCATACAATAGGAGACGACCCTGCTGTCTCCTACA
CAGAGTCAAGAGCGAAAAACTAACGAGTCAACAGGCCAATGGCCCGCTTT
CATTCCCCTCAAACTTGTCTCGTTTCGTCTCGTCTCGTCTCCCCTTGACC
ACCTCTTGTACGGTGCAACGTCACACGTCTCCTACAGGACGAGCGGTATA
ACCCACCACCGGCCGTGCTGCCCCGCGACGGCGTGATCGTGATCGCACTG
GGCTCATTCAAGGCTTTAGTACACACGGAGGCGTGTTTGTTGTTTGAAGC
CGGAAAGACGGACGTTTCGCACGTTGCGCCAGTATTTGCCGAGCTCATGC
AAGCTAATGCACAAGTGAGGGGTGTCGGTTAACAAGAAGGAAGACCACAC
AGAACACGCTTGCTGCTGTCTATAGTCGTCGCACTGCCTTGCCTTGATTG
CCTCAGATTCGAAATATGGAAACGAAATCATCCGATGAATTTGAGGGCAC
GCTCGATTTCTTCCTACGTTATTTCGCGCATGTTATGAAAAACGTTTTTT
GTATGAAATGTCGTGGGAGGGTCACGCGGGCCTCGGTGCTATTTTTATGT
TTAATTGTTTTTACCCCCTACTGAGGGCTTGCGCACTCCCTGAAACTAGG
AACCGCGGTCAGCGAGCATGGGAGGCGCAATGGATGAGGGGGGGTCGAGA
AATAACAACGCAAAGGCTCTAGGCTCTAGCAGGGAAGACTTGTGCGAGCT
AGGGAAGGAGGGTATCTCCCACCCTCGAGGAGCTCGGGATGGCCCGGAAA
GCGCAGCACGATTACCGTCTTCGTCTCCAACGACGGTGACGCGCAACTCG
CCAGGGGTCGTTCAGGGTAGTTCGGAGGTAAAGGCAAGTCAAGAGGACGG
CCAGGAGGGTGCTCCGGTTGGCGGTCGTACGACGCAGCGATCGGGCTTCG
TGTCGAGGATCGGTGAGTACGTTGGGACGCTCGGGTTTAGGAAATATGAG
AAGGTGGATGAGAAACCAGAGGAAGACGTGCGGGAGAACCAAATGAAGGT
GGTTTTCGAAGAACAGCAACCGATTCCGTTCGAGCTGGCCATGCTCGAGG
CCATGCTTCAGGAGGTGAGCTAGAGGCAAAATGATGGGTAAACGAAGGAC
AGGAGGTCTCACGTTTGGGTATGGATTAGGCTTTCGGCCTTGGTTATGAT
TTGGACGAGCGATCAGGTCGGTACTGTCGATATTTAGTATAATCTTCTCT
TGTTTGATGCAATGCCTCTCTCACTTTTGTGGAATTGGAGACTGATTGTT
TGGTGCATTTTTATATGCGGTACTATTAATAGTAATAATGTTGTTCAAAA
TTTTGAAATAAATAACAAGACGCCTACGATAGCTGTATAATCTACACCCG
CAACTCTCGTACACACTATTATAGACCGCTGCGACAAATTTTGATTGAAA
GGTCGCGGGAATCATTGCTTTTGTTTCCGAAATGAGTAGGTGATCGAGAG
CTACTACAGGAGAGCACACGTGGTTCGAAGGCTCATGGAACATCGACTGA
AGCCCAACGATATAACCTCGCTCTTCAACCCCAACAGAGTCGAGTACTAT
CGAGTAGTGCCGCTAAAGCTAGCCTTGAGACAACTCGAGCTAAAGCTTTC
CCAGGTGAGCGTCCCCGCCGTCTTATGCGGTTTTCCCTCTTAAAAAGCTT
GTTGACCCGCGTGGAGAACCGTTTAATGTATATAGAGCAGAGAGTGCCAG
TTTTCCCATGCCACCCAGCTTTTATACCCGTCGTCATCGTCAGCTCGTCA
TTATATGGCTGTTGTTAAACGATTCTGTAGCTTCGTTTTCCCCCGCCCGA
CGTTCCCCCTCTCTCTCCCCCCGCATGGCTGGCCACCACGATCCGCTTTA
TTTCGACCGCTGTCTGTTGTGTGGATGGAATACGACTTGATGGAACGGCG
GTAGACCAGAGCCTGCCTGGAAGAGCTCTTGCACAGCGACGAGGACATGC
TTGGCCTACTGCTGACAGAAGCGAAAGAACTGGCACAAGGCGAGGTGTGT
TACATATTACGGAGAATGTGTCAACATTACGTTATATGTGTCGGACGTAG
CCTCTTAATACGTAGTGTTTTCGAGGTCCACACACGAGAGTTTTGTCGAA
CGCGAAAAATGCAAAAACTCTCCCATGTATCCCCCCCCTCCATCGCCCCC
CCCGACATATTTCAAGACATTTAAATAGATTTCACGCCTGATAACATGCA
GCATTTTGGCACGTTCTCGCCAGTGAGTAGCGGCGTTTGTTCTTGATACA
GTGTGCGGTAGATACGCGTGGCTGTCGATTCTTTGTGTGTGGCTTCTGCA
AAAGAGTACCGCATAACGCCTGCATATTGTTTGTCCGACTTACCCAGGAG
ATGCTGACAGGCTCGGGGAAACTTCTTTCGGCGCTGATCCAGCCTATGTT
CAACTGCTCCTCTACGCTTTCCCTCCCACTAGATTTTCTTGTTTTATTCA
TTACTCCTCTCTGCATGTTTCATTGGTTTGTGGTCATTCTACAGCTTCTG
GATCCAATCCGGCATTCCGTTGTTGAGCTTCTGCTGGAGAACTACCACCG
CCAGCTGGTGCTTGTGGAGCACGATGTGGCCGCGATGAAGCATGAATTGG
AATCCATGCAGGCGAGGGACGAGGGTCGATAAAGCGTGTGTTTCTGTGTC
GTGAAATTAGGTTTCGATAAAGGAGGCTTTTGTCGCATCTGACTGATGTA
TCTCCTTTCCCTGGGCTTTGGTTTGGTTTGATTATTGTAAAATAAAATAA
AAACATTGCTTCTATAATGTGCGCCGTTTTGCGTTCGCTGTGTTTTGTTT
TGTTTAACGCTTTACCCCGGGCTTTAGTTCGCATCCAGGGGCTGGTTGGC
ATCCTGAGGTTATTGCGTCATGGGGCGGTATCTTCGGGGGCACTAAATGA
ACTCAGCAATTCTGCAAGATTGATCTCGGGGCGCTTTGAAGCATCTTGGC
ACGCTCACCCCCCATGCGTCCTTTTTCGATATGCAGGAGCTGGCCGCGAT
CAGCCTGGACGTGTCCCGGAACAGTATGATCGAAGTGGATATCCGATTGA
GCATGTTAAACCTGGGCGTCGCGTCGTCCGCGTGCGTGTTCGGCGCTATG
GGTAAGACATGATGTTGCCCTTGTGTCCTCGTCGACAGGTATGTCATATA
ACGGACTATTACCGGTTTTCGCGTTTTCATATTTTTATGATCTAGTTCTC
CATAGGTGCTAGCTTTTTTTACCTTTAGCCAATCGTTCCGCTATCTTCCT
GAGATCAATACGCCAATCGCAAGGTGTCTTAATATGTTGGAGGCCTATGT
GAATGGGGATGTCAACATCGTTGTAGGTACTGCTATTACCTGTTGCTTGC
TCCAGGGATGAACGTCGTGAGTGGATTGGAATCATCACACGTCGCGTTCT
ACGCGTTACTTGGAGGTACCGTGGCAGCGTGCACTGCTGGTTTGGCCGGT
GTCATGAGGCATTTGAGGTAAGCATCTCGATGCCGCGGGTTCGTCGCGAT
CACCGGTTGCAGAGTTCTCTTTTATCATTCACCGAAGAAACTCTTCAACA
TCGCCATCACGGCTATCGAACGAAAAAGTCGAGACACCCCCATTGTTTTT
CGTGTATCGAAATCTAGCATTCGCGTTCGCGTGGTATGTGCGTTATTGTG
TCTGCTTCGAGCAGGTCGGTGGCGCGTTCCGGAGACTCACAGCAGGGTCA
GCTAATGGTGAGGATAGATGATCACTAAAACGTGGGTCGTGTGACGTGAG
GATTGATACATGGCGCTGTACATGGAAACAATCCTGGCGATAACGATCTT
TTATTAAGCCCATGAAATTGTCAAAAATATATCAACTGATTCTGGCGACC
GCGCTCGATGTTATGATGTTATGATGTTATGGGGGTATGGGGGTATGACT
TAATATTCAGGACCACTTCGCGACCGCGGCGTAAGACTTAGCGACTCAAT
GTATCATTGACGACTTCACTGGATTTTCTGCTTGCTGGCGATGGTCGCCG
CCGCAGGCGCTGAACACGATTTGTGATCACGTGGATGACATCGAAATTGT
TTTGCGGACTGAACTCGAGTCTGGGAGAAATACTAACACCGACGAGGCAG
GATATGGCCTCATTAATAGGTCCGCTATGGCCAAAAAGCTGGCGCACGCG
AGAGGCAAAGAGGTGGGCCGCGGTTACGCATTCGGCAGGTAGACCAAAGG
ATAGGGGACGGGAGCAGATTATGTTGGCGTCGGGAAGAATCGAAACGCAT
GACGTTGAGGGTAGCACTTTTGTTCTCATCAAAATGCCATAAATTAATGT
AGGGGGCTTAGACGCGCATGTCGTTTCACTGAACGTACTTTGGATTTATG
CTCTGCTTCGCGGAATATATTACGTTGCAGACCTCGCCCGAGGATCTATG
GTTCGGACGACAACGAGGTTATCATCCGCTCGCCGGCTAAGTTTCTTTGT
TCCCCACCCTCCTTGCCCTTGATGCTTTTTCACTGCAAGGTTTCTAATCT
CGAATTAGACCTGATCTTCGCGGCGTTCGATACGACGGGGGATGGTGCGA
TCGATACGAAGGAGTACGGGAAGCTTGTCACCCAATCGACGGCTTCCTTG
ACAAACCAAGGCCGAGGAGGCAACCTTCCGAAGTCGCTGTGATTGATATT
GAAGTGAAGTTACATGACGCTGGACCGTGTTTCGAAAGAACTCGCGATGT
ACGACAACGAGGGAATCCTAGCGATTGGCTCCGTCCTTCTCAAGGCGGCT
GTATATACGCTACTAATGGCGAAATCATCAAATGGTGAAACAGCGTTGTA
TGAAGCACTTTGGCTTTTCTATTCCTCTCGCGTGTAAAGTTCATTATATA
TCATAGTAGTTCTACTCCACTTTGTCAGCAAAAAATGGCAAATAATGCAG
GTTTTGACCAACCAAAGTTCCAAGGGCGTGTTTGGTACGGTACCGGTACC
GGGCGTACCGGTACCGGTATGGATGACGTACCGAACTTACCGAAGTATCC
GGTATCGCTATTGATGCCGTGCCAAACTTACCGAAGTGTTCGATATCGTT
GGTATGGATGTCGTACCGAACTTACCGAAGTGTCCGGTACCGGGATGGAT
ATCGTACCGAACTTACCGAAGTGTCCAGTACCGGTATTGATGTTGTACCG
AGCTTGCCGAAGTGCCCGGTATCGCTATTGATGTTGTATCCTAGTAATAC
CGGCGGTATGCCAAGGTACGTACCGTACCGAACACATCCTTTTCCAACGA
ATGCTGTCAACGATTCTTTAGTATCGGCAAAAGAGCTGTTATGACCAACC
ATGGATGTACTGCAATATTAGATTCCAACGATATTATGCTGGATGGTCTA
TGGGGCCTCCGCCAATTCAAGTGGAAACGGCAGTAGGCTCTAATAATGTC
ACTGTTTGTATCGTATACCTGGTATATATAGCTATCAGGACAACGATGAT
CAACCAGAGGGCAGATTTAACATGACAGTCCGCCTTTGCCAATAGCATCA
GTAGACACGTGTGTATTTCCATTGATTTGGTAGATGAACGGCGGCAGCCC
CGTCCTTGGTTGCCCGTTTGGTCCTGGATTACTTGGAGCAGCAATTATAT
GCTGTTCGATGTTAGCGATAACATGCCCCCTTAGCCGAGAGTAGGACACG
TTTTCCAAGATGGTGTACAGCAACCACAAGAGCAAGAGGGACCGGGGAGT
TGTGTTTCTTTTGCAGCGGTCGGGAAGGGATAACCTAGTAGTTGCCTGGG
TAATTGCAGGCTAGTCTCGGGTCCATCGTGACACATACAGATTGCTGCAC
GCATATATTGGGGCGCCCTTTTGCCGTGTTGTCTACAAGCAAGCGCGATT
GCCCGCGTACCTTTCATATTCCTTTCTTATTCTCTATTGAAGAGAAAAAC
GCGACTGTGCCCTCCTGTTCGAATATTCCAGCCGGGTCTCAACTTACTAT
GATGTCTTACATTGAGAAGTTACGTTCAATAAAATTGATCAATGACCAAG
CCAACTATACATAGGGGAACGGAGCGTTATATCAGTGACAGGCAAGGAGT
CGCGACCTGAATTTTTCTAATTTCAGCTTTCATATTTGGGAGAAGTTTCT
AAGAAATTGTGTTTCCCGAGAAGGTTCTCTGAATATTTTTTCATATTTTG
GCAACATGGTTGAGTAAGGGTGCGTGGCGTGTGAAGTCACTATGATTGGT
TGAAAACCTGCCGCGTGCATGCGAGAGTTTTGTGCCACATCTTTTTGAAC
TCAAGACCAGGGGTTTAGATAGTTTGGCGCTTCGGCGGAGCGCCGAAAAG
TTTGATTGTCTCGGCGCTTGCCCCGATTGTTTTGGGGGAATTCGGCGGCT
TTCCGCCGACGTCCTTTTGAGGCTCCGCCGAACAAAACGAACAACCAGCG
GCTGCATTCGGCACGGCCCAAACCCTGGGGAAAACATTTCTCCACTTCTT
GGAACTCCCAGCTCGCTGGTGAGCAAGTATAGATGGCGAGCTTGCTTGTA
GAGACCGCGCTGGTTGTGAGATTGCAGCTAGCTGGACTACCATCTGCCAC
CTGCGATGGACGAATGCTGTATACATCTGGGCTGTGG
back to top

Coding sequence (CDS) from alignment at H-elongata_contig11032:871..8007+

>mRNA_H-elongata_contig11032.852.1 ID=mRNA_H-elongata_contig11032.852.1|Name=mRNA_H-elongata_contig11032.852.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3426bp|location=Sequence derived from alignment at H-elongata_contig11032:871..8007+ (Himanthalia elongata Himel1 dioecious)
TACGAGGTTTTCGAGGTGAGTAAATTGGGCGACCTCAGGCGAACGAGCGT
CACCCTCGGCGAAGTGCTCCAGGACTTCGGGGTTCACGCTCGAGATGTCC
TGTCGCTCGGAATACAGTACGAGGTTTTCGAGGTGAGTAAATTGGGCGAC
CTCAGGCGAACGAGCGTCACCCTCGGCGAAGTGCTCCAGGACTTCGGGGT
TCACGCTCGAGATGTCCTGTCGCTCGGAATACAGGACGAGCGGTATAACC
CACCACCGGCCGTGCTGCCCCGCGACGGCGTGATCGTGATCGCACTGGGC
TCATTCAAGGCTTTAGTACACACGGAGGCGTGTTTGTTGTTTGAAGCCGG
AAAGACGGACGTTTCGCACGTTGCGCCAGTATTTGCCGAGCTCATGCAAG
CTAATGCACAAGACGAGCGGTATAACCCACCACCGGCCGTGCTGCCCCGC
GACGGCGTGATCGTGATCGCACTGGGCTCATTCAAGGCTTTAGTACACAC
GGAGGCGTGTTTGTTGTTTGAAGCCGGAAAGACGGACGTTTCGCACGTTG
CGCCAGTATTTGCCGAGCTCATGCAAGCTAATGCACAAGAACCGCGGTCA
GCGAGCATGGGAGGCGCAATGGATGAGGGGGGGTCGAGAAATAACAACGC
AAAGGCTCTAGGCTCTAGCAGGGAAGACTTGTGCGAGCTAGGGAAGGAGG
GTATCTCCCACCCTCGAGGAGCTCGGGATGGCCCGGAAAGCGCAGCACGA
TTACCGTCTTCGTCTCCAACGACGGTGACGCGCAACTCGCCAGGGGTCGT
TCAGGGTAGTTCGGAGGTAAAGGCAAGTCAAGAGGACGGCCAGGAGGGTG
CTCCGGTTGGCGGTCGTACGACGCAGCGATCGGGCTTCGTGTCGAGGATC
GGTGAGTACGTTGGGACGCTCGGGTTTAGGAAATATGAGAAGGTGGATGA
GAAACCAGAGGAAGACGTGCGGGAGAACCAAATGAAGGTGGTTTTCGAAG
AACAGCAACCGATTCCGTTCGAGCTGGCCATGCTCGAGGCCATGCTTCAG
GAGGAACCGCGGTCAGCGAGCATGGGAGGCGCAATGGATGAGGGGGGGTC
GAGAAATAACAACGCAAAGGCTCTAGGCTCTAGCAGGGAAGACTTGTGCG
AGCTAGGGAAGGAGGGTATCTCCCACCCTCGAGGAGCTCGGGATGGCCCG
GAAAGCGCAGCACGATTACCGTCTTCGTCTCCAACGACGGTGACGCGCAA
CTCGCCAGGGGTCGTTCAGGGTAGTTCGGAGGTAAAGGCAAGTCAAGAGG
ACGGCCAGGAGGGTGCTCCGGTTGGCGGTCGTACGACGCAGCGATCGGGC
TTCGTGTCGAGGATCGGTGAGTACGTTGGGACGCTCGGGTTTAGGAAATA
TGAGAAGGTGGATGAGAAACCAGAGGAAGACGTGCGGGAGAACCAAATGA
AGGTGGTTTTCGAAGAACAGCAACCGATTCCGTTCGAGCTGGCCATGCTC
GAGGCCATGCTTCAGGAGGTGATCGAGAGCTACTACAGGAGAGCACACGT
GGTTCGAAGGCTCATGGAACATCGACTGAAGCCCAACGATATAACCTCGC
TCTTCAACCCCAACAGAGTCGAGTACTATCGAGTAGTGCCGCTAAAGCTA
GCCTTGAGACAACTCGAGCTAAAGCTTTCCCAGGTGATCGAGAGCTACTA
CAGGAGAGCACACGTGGTTCGAAGGCTCATGGAACATCGACTGAAGCCCA
ACGATATAACCTCGCTCTTCAACCCCAACAGAGTCGAGTACTATCGAGTA
GTGCCGCTAAAGCTAGCCTTGAGACAACTCGAGCTAAAGCTTTCCCAGAC
CAGAGCCTGCCTGGAAGAGCTCTTGCACAGCGACGAGGACATGCTTGGCC
TACTGCTGACAGAAGCGAAAGAACTGGCACAAGGCGAGACCAGAGCCTGC
CTGGAAGAGCTCTTGCACAGCGACGAGGACATGCTTGGCCTACTGCTGAC
AGAAGCGAAAGAACTGGCACAAGGCGAGCTTCTGGATCCAATCCGGCATT
CCGTTGTTGAGCTTCTGCTGGAGAACTACCACCGCCAGCTGGTGCTTGTG
GAGCACGATGTGGCCGCGATGAAGCATGAATTGGAATCCATGCAGCTTCT
GGATCCAATCCGGCATTCCGTTGTTGAGCTTCTGCTGGAGAACTACCACC
GCCAGCTGGTGCTTGTGGAGCACGATGTGGCCGCGATGAAGCATGAATTG
GAATCCATGCAGGAGCTGGCCGCGATCAGCCTGGACGTGTCCCGGAACAG
TATGATCGAAGTGGATATCCGATTGAGCATGTTAAACCTGGGCGTCGCGT
CGTCCGCGTGCGTGTTCGGCGCTATGGGAGCTGGCCGCGATCAGCCTGGA
CGTGTCCCGGAACAGTATGATCGAAGTGGATATCCGATTGAGCATGTTAA
ACCTGGGCGTCGCGTCGTCCGCGTGCGTGTTCGGCGCTATGGGGATGAAC
GTCGTGAGTGGATTGGAATCATCACACGTCGCGTTCTACGCGTTACTTGG
AGGTACCGTGGCAGCGTGCACTGCTGGTTTGGCCGGTGTCATGAGGCATT
TGAGGGATGAACGTCGTGAGTGGATTGGAATCATCACACGTCGCGTTCTA
CGCGTTACTTGGAGGTACCGTGGCAGCGTGCACTGCTGGTTTGGCCGGTG
TCATGAGGCATTTGAGCAGGTCGGTGGCGCGTTCCGGAGACTCACAGCAG
GGTCAGCTAATGCAGGTCGGTGGCGCGTTCCGGAGACTCACAGCAGGGTC
AGCTAATGGCGCTGAACACGATTTGTGATCACGTGGATGACATCGAAATT
GTTTTGCGGACTGAACTCGAGTCTGGGAGAAATACTAACACCGACGAGGC
AGGATATGGCCTCATTAATAGGTCCGCTATGGCCAAAAAGCTGGCGCACG
CGAGAGGCAAAGAGGCGCTGAACACGATTTGTGATCACGTGGATGACATC
GAAATTGTTTTGCGGACTGAACTCGAGTCTGGGAGAAATACTAACACCGA
CGAGGCAGGATATGGCCTCATTAATAGGTCCGCTATGGCCAAAAAGCTGG
CGCACGCGAGAGGCAAAGAGGTTTCTAATCTCGAATTAGACCTGATCTTC
GCGGCGTTCGATACGACGGGGGATGGTGCGATCGATACGAAGGAGTACGG
GAAGCTTGTCACCCAATCGACGGCTTCCTTGACAAACCAAGGCCGAGGAG
GCAACCTTCCGAAGTCGCTGTGAGTTTCTAATCTCGAATTAGACCTGATC
TTCGCGGCGTTCGATACGACGGGGGATGGTGCGATCGATACGAAGGAGTA
CGGGAAGCTTGTCACCCAATCGACGGCTTCCTTGACAAACCAAGGCCGAG
GAGGCAACCTTCCGAAGTCGCTGTGA
back to top