mRNA_H-elongata_contig11030.849.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: D7FTJ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTJ8_ECTSI) HSP 1 Score: 262 bits (669), Expect = 1.460e-85 Identity = 127/144 (88.19%), Postives = 136/144 (94.44%), Query Frame = 1
Query: 22 KIFTPSREPLVDNMGRSYGLGRRKTSIARVWISLSEGEGGIFSVNTKPMIEYFPRDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
K FTPSREPLVDN+GRSYGLGRRKTS ARVWISLS+GEGG+F VN++PMI+YFPRDHLQNEILKPLE T KLG FHVRCTAKGGGQAGQAGA+RLGLARALEAHDPWLRK+LKK G+MERDSR VERKKPGLKKARKAPQWVKR
Sbjct: 174 KTFTPSREPLVDNLGRSYGLGRRKTSTARVWISLSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTNKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKMLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 317
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: A0A3R7JDC3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JDC3_9STRA) HSP 1 Score: 158 bits (399), Expect = 8.840e-46 Identity = 87/150 (58.00%), Postives = 102/150 (68.00%), Query Frame = 1
Query: 22 KIFTPSREPLV-----DNMGRSYGLGRRKTSIARVWISLS-EGEGGIFSVNTKPMIEYFPRDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
K F ++ +V D GR+YG GRRKTS ARVW+ S E GG VN K +++YF RD + E+LKP + EK+G F V CT KGGG GQAGAVR G+ARAL+ +DP R LKKAGLM RD RMVERKKPG KKARK QWVKR
Sbjct: 84 KAFHDAKNKIVRVRKLDEKGRAYGTGRRKTSTARVWVKQSAEPFGGRIVVNKKDVVDYFVRDTHREEVLKPFSVIEKIGGFDVYCTVKGGGMTGQAGAVRHGIARALQNYDPEYRPALKKAGLMTRDPRMVERKKPGQKKARKKFQWVKR 233
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: A0A0L0D3D9_THETB (30S ribosomal protein S9 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D3D9_THETB) HSP 1 Score: 152 bits (384), Expect = 1.820e-43 Identity = 78/139 (56.12%), Postives = 98/139 (70.50%), Query Frame = 1
Query: 52 VDNMGRSYGLGRRKTSIARVWIS-----LSEGEGGIFSVNTKPMIEYFPRDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
+D +GR+YG GRRKTSIARVW+ + + VN+KP+ +YFP H +N +++PL + KLG F +R T KGGG GQAGA+RLG+ RALE DP RK LK AG+M RD RMVERK GL+KAR+APQWVKR
Sbjct: 99 LDALGRAYGTGRRKTSIARVWVEPVAHPAAPQPADVLVVNSKPLADYFPAMHHRNHVIEPLRLLGKLGAFKIRATVKGGGHTGQAGALRLGICRALEIVDPAFRKPLKAAGMMTRDPRMVERKLAGLRKARRAPQWVKR 237
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: A0A7S2A920_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A920_TRICV) HSP 1 Score: 153 bits (387), Expect = 2.590e-43 Identity = 80/140 (57.14%), Postives = 99/140 (70.71%), Query Frame = 1
Query: 34 PSREPLVDNMGRSYGLGRRKTSIARVWISLSEGEGGIFSVNTKPMIEYFPRDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
P R P +D+ GR+YGLGRRKT+ ARVWI G + +VN P ++YF R+ L+ +IL P +T G F VRC GGG++GQAGAVRLG+ARALE ++P R +K GLM RD RMVERKK G KKARKAPQWV+R
Sbjct: 153 PVRVPQIDDRGRAYGLGRRKTATARVWIYPGSG---VVTVNKMPFVDYFEREALREDILSPFIVTRTCGQFDVRCYCHGGGKSGQAGAVRLGVARALEKYNPEYRPPMKHKGLMTRDPRMVERKKIGKKKARKAPQWVRR 289
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: A0A6S9GRK8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GRK8_HETAK) HSP 1 Score: 151 bits (381), Expect = 5.010e-43 Identity = 81/139 (58.27%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 37 SREPLVDNMGRSYGLGRRKTSIARVWISLSEGEGGIFSVNTKPMIEYFPRDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
++EP +D+ GRSYG GRRK +IARVWI EG F+VN+KPM EYF R Q+++ KP + F V CT +GGG GQAGAVRLGL+RALE ++P+ R LKK GL+ RD+R+VERKKPG KKARK QWVKR
Sbjct: 101 TKEPKIDDQGRSYGTGRRKAAIARVWIKPGEGN---FTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCTVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 236
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: A0A225UXJ6_9STRA (Mitochondrial/chloroplast ribosomal protein S9 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UXJ6_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.220e-42 Identity = 79/135 (58.52%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 52 VDNMGRSYGLGRRKTSIARVWIS-LSEGEGGIFSVNTKPMIEYFPRDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
+D+ GR+YG GRRKTS+ARVW+ ++ G VN K +++YF RD + E+LKP + E++G F V CT KGGG GQAGAVR G+ARAL+A DP LR LKK GL+ RD RMVERKKPG KARK QWVKR
Sbjct: 186 LDSKGRAYGTGRRKTSVARVWVKPAAQPFTGRVQVNKKDLVDYFVRDTHREEVLKPFSVVEQIGGFDVYCTVKGGGMTGQAGAVRHGIARALQAFDPELRPALKKEGLLTRDPRMVERKKPGQAKARKKFQWVKR 320
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: A0A3M6VSP6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSP6_9STRA) HSP 1 Score: 148 bits (374), Expect = 6.780e-41 Identity = 79/135 (58.52%), Postives = 96/135 (71.11%), Query Frame = 1
Query: 52 VDNMGRSYGLGRRKTSIARVWIS-LSEGEGGIFSVNTKPMIEYFPRDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
VD GR+YG GRRKTS+ARVWI ++ G VN K +++YF RD + ++L+P + E++G F V CT KGGG GQAGAVR G+ARALE +P LR LKKAGL+ RDSRMVERKK G KARK QWVKR
Sbjct: 200 VDAKGRAYGTGRRKTSVARVWIKPAAQPFTGCIKVNKKDLVDYFVRDTHREDVLQPFSVVEQIGGFDVYCTVKGGGMTGQAGAVRHGIARALENFNPELRPALKKAGLLTRDSRMVERKKAGQAKARKKFQWVKR 334
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: M4BS40_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BS40_HYAAE) HSP 1 Score: 148 bits (374), Expect = 7.770e-41 Identity = 77/135 (57.04%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 52 VDNMGRSYGLGRRKTSIARVWIS-LSEGEGGIFSVNTKPMIEYFPRDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
+D GR+YG GRRKTS+ARVW+ ++ G VN K +++YF RD ++++L+P ++ E++G F V CT KGGG GQAGAVR G+ARALE DP LR LKKAGL+ RD RMVERKK G KARK QWVKR
Sbjct: 206 LDAQGRAYGTGRRKTSVARVWVKPAAQPFTGCIKVNKKDLVDYFVRDTHRDDVLQPFQVVEQMGGFDVYCTVKGGGMTGQAGAVRHGIARALEKFDPELRPALKKAGLITRDPRMVERKKAGQPKARKKFQWVKR 340
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: A0A484EH21_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EH21_BRELC) HSP 1 Score: 147 bits (372), Expect = 9.520e-41 Identity = 83/140 (59.29%), Postives = 97/140 (69.29%), Query Frame = 1
Query: 40 REPLVDNMGRSYGLGRRKTSIARVWI--SLSEGEGGIFSVNTKPMIEYFPRDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
R VD GR+YG GRRKTS ARVWI +L G I VN K +++YF RD + E+LKP + +K+G F V CT KGGG GQ+GAVR G+ARAL+A DP LR +KKAGLM RD RMVERKK G KARK QWVKR
Sbjct: 181 RVRTVDEQGRAYGTGRRKTSSARVWIKPALVPFMGRI-QVNKKDLVDYFVRDFHREEVLKPFSVVDKIGGFDVYCTVKGGGLTGQSGAVRHGIARALQAFDPNLRPAMKKAGLMTRDPRMVERKKAGQPKARKKFQWVKR 319
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Match: A0A812NWY0_SYMMI (RpsI protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NWY0_SYMMI) HSP 1 Score: 143 bits (361), Expect = 2.980e-40 Identity = 80/144 (55.56%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 31 TPSREPLVDNMGRSYGLGRRKTSIARVWISLSEGEGGIFSVNTKPMIEYFP---RDHLQNEILKPLEITEKLGWFHVRCTAKGGGQAGQAGAVRLGLARALEAHDPWLRKVLKKAGLMERDSRMVERKKPGLKKARKAPQWVKR 453
T RE +D +GRSYG GRRKT++ARVW+ GE VN + + +YFP R H L P +TE G F V CT KGGGQ GQAGAVR+G+ARA+EA +P + +LKK L+ RDSRMVERKK G KKARK QWVKR
Sbjct: 80 TQYREAAIDELGRSYGTGRRKTAVARVWLKKGVGE---CIVNKRNIADYFPCIARSHA----LHPFIVTETAGLFDVMCTVKGGGQMGQAGAVRMGIARAIEAFEPGFKPLLKKYKLLTRDSRMVERKKAGFKKARKRKQWVKR 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11030.849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11030.849.1 >prot_H-elongata_contig11030.849.1 ID=prot_H-elongata_contig11030.849.1|Name=mRNA_H-elongata_contig11030.849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp SDGDGNGKIFTPSREPLVDNMGRSYGLGRRKTSIARVWISLSEGEGGIFSback to top mRNA from alignment at H-elongata_contig11030:715..1907+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11030.849.1 ID=mRNA_H-elongata_contig11030.849.1|Name=mRNA_H-elongata_contig11030.849.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1193bp|location=Sequence derived from alignment at H-elongata_contig11030:715..1907+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11030:715..1907+ >mRNA_H-elongata_contig11030.849.1 ID=mRNA_H-elongata_contig11030.849.1|Name=mRNA_H-elongata_contig11030.849.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig11030:715..1907+ (Himanthalia elongata Himel1 dioecious)back to top |