prot_H-elongata_contig110246.839.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110246.839.1
Unique Nameprot_H-elongata_contig110246.839.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: A0A835YQT7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT7_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.690e-33
Identity = 58/77 (75.32%), Postives = 72/77 (93.51%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIKVD 77
            HWQW++FL++GSTA YV++YS+YYF+FKTE  GFLQ+SFYFGYMGLFCVAL V+CG+IG+ GS+VFVKQIY+NIKVD
Sbjct:  524 HWQWISFLASGSTAGYVFLYSIYYFYFKTEMFGFLQISFYFGYMGLFCVALFVLCGTIGLAGSSVFVKQIYKNIKVD 600          
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: A0A2K1K8P8_PHYPA (Transmembrane 9 superfamily member n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K8P8_PHYPA)

HSP 1 Score: 112 bits (280), Expect = 3.020e-30
Identity = 49/77 (63.64%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIKVD 77
            HWQW +FLSA STA YVY+YS+YYF+ KT+ SGF Q+SFYFGY  +FC+ L + CG++G LGS++FV++IYRNIK D
Sbjct:   58 HWQWTSFLSAASTAGYVYLYSVYYFYMKTKMSGFFQISFYFGYTLMFCLGLGIFCGAVGYLGSSMFVRRIYRNIKCD 134          
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: A0A444E945_ENSVE (Transmembrane 9 superfamily member n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444E945_ENSVE)

HSP 1 Score: 114 bits (285), Expect = 6.990e-30
Identity = 48/77 (62.34%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIKVD 77
            HWQW +F SA STA+YVY+YS+YY++ KT+ SGF Q SFYFGY+ +FC+ L ++CG++G LGST+FV++IYRNIK D
Sbjct:  155 HWQWTSFFSAASTAVYVYLYSVYYYYMKTKMSGFFQTSFYFGYILMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD 231          
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: D8LEX9_ECTSI (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX9_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 6.990e-30
Identity = 55/77 (71.43%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIKVD 77
            HWQWV+FLSA STA YV++YS YY WFKT QSGF+Q+SFYFGYMGLFC A           GSTVFVKQIYRNIKVD
Sbjct:  155 HWQWVSFLSAASTAGYVFLYSGYYLWFKTHQSGFMQISFYFGYMGLFCAAXXXXXXXXXXXGSTVFVKQIYRNIKVD 231          
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: A0A453K7A2_AEGTS (Transmembrane 9 superfamily member n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A453K7A2_AEGTS)

HSP 1 Score: 110 bits (275), Expect = 1.160e-29
Identity = 48/77 (62.34%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIKVD 77
            HWQW +F SA STA+YVY+YS+YY+  KT+ SGF Q SFYFGY  +FC+ L ++CG+IG +GST+FV++IYRNIK D
Sbjct:   44 HWQWTSFFSAASTALYVYLYSIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAIGYVGSTLFVRRIYRNIKCD 120          
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: A0A427A5K3_ENSVE (Transmembrane 9 superfamily member n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427A5K3_ENSVE)

HSP 1 Score: 113 bits (283), Expect = 1.400e-29
Identity = 48/77 (62.34%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIKVD 77
            HWQW +F SA STA+YVY+YS+YY++ KT+ SGF Q SFYFGY  +FC+ L ++CG++G LGST+FV++IYRNIK D
Sbjct:  155 HWQWTSFFSAASTAVYVYLYSVYYYYMKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD 231          
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: A0A0A9P6E2_ARUDO (Transmembrane 9 superfamily member n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9P6E2_ARUDO)

HSP 1 Score: 111 bits (278), Expect = 3.230e-29
Identity = 49/77 (63.64%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIKVD 77
            HWQW +F SA STA+YVY+YS+YY+  KT+ SGF Q SFYFGY  +FC+ L ++CG+IG LGST+FV++IYRNIK D
Sbjct:  119 HWQWTSFFSAASTALYVYLYSIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAIGYLGSTLFVRRIYRNIKCD 195          
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: A0A6H5KXN7_9PHAE (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN7_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 7.540e-29
Identity = 56/77 (72.73%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIKVD 77
            HWQWV+FLSA STA YV++YS YY WFKT QSGF+Q+SFYFGYMGLFC AL          GSTVFVKQIYRNIKVD
Sbjct:  534 HWQWVSFLSAASTAGYVFLYSAYYLWFKTRQSGFIQISFYFGYMGLFCAALXXXXXXXXXXGSTVFVKQIYRNIKVD 610          
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: A0A371F5M1_MUCPR (Transmembrane 9 superfamily member (Fragment) n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A371F5M1_MUCPR)

HSP 1 Score: 108 bits (271), Expect = 8.580e-29
Identity = 46/75 (61.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIK 75
            HWQW +F SA STA+YVY+YS+YY++ KT+ SGF Q SFYFGY  +FC+ L ++CG++G LGS +FV++IYRNIK
Sbjct:   49 HWQWTSFFSAASTAVYVYLYSVYYYYVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIK 123          
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Match: A0A371EE92_MUCPR (Transmembrane 9 superfamily member n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A371EE92_MUCPR)

HSP 1 Score: 108 bits (271), Expect = 1.140e-28
Identity = 46/75 (61.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVALAVMCGSIGVLGSTVFVKQIYRNIK 75
            HWQW +F SA STA+YVY+YS+YY++ KT+ SGF Q SFYFGY  +FC+ L ++CG++G LGS +FV++IYRNIK
Sbjct:   62 HWQWTSFFSAASTAVYVYLYSVYYYYVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIK 136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110246.839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQT7_9STRA3.690e-3375.32Transmembrane 9 superfamily member n=1 Tax=Tribone... [more]
A0A2K1K8P8_PHYPA3.020e-3063.64Transmembrane 9 superfamily member n=2 Tax=Physcom... [more]
A0A444E945_ENSVE6.990e-3062.34Transmembrane 9 superfamily member n=1 Tax=Ensete ... [more]
D8LEX9_ECTSI6.990e-3071.43Transmembrane 9 superfamily member n=1 Tax=Ectocar... [more]
A0A453K7A2_AEGTS1.160e-2962.34Transmembrane 9 superfamily member n=3 Tax=Mesangi... [more]
A0A427A5K3_ENSVE1.400e-2962.34Transmembrane 9 superfamily member n=1 Tax=Ensete ... [more]
A0A0A9P6E2_ARUDO3.230e-2963.64Transmembrane 9 superfamily member n=1 Tax=Arundo ... [more]
A0A6H5KXN7_9PHAE7.540e-2972.73Transmembrane 9 superfamily member n=1 Tax=Ectocar... [more]
A0A371F5M1_MUCPR8.580e-2961.33Transmembrane 9 superfamily member (Fragment) n=3 ... [more]
A0A371EE92_MUCPR1.140e-2861.33Transmembrane 9 superfamily member n=3 Tax=Mesangi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004240Nonaspanin (TM9SF)PFAMPF02990EMP70coord: 1..34
e-value: 1.1E-6
score: 27.7
IPR004240Nonaspanin (TM9SF)PANTHERPTHR10766TRANSMEMBRANE 9 SUPERFAMILY PROTEINcoord: 1..77
NoneNo IPR availablePANTHERPTHR10766:SF48coord: 1..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..67
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110246contigH-elongata_contig110246:3..841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110246.839.1mRNA_H-elongata_contig110246.839.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110246 3..841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110246.839.1 ID=prot_H-elongata_contig110246.839.1|Name=mRNA_H-elongata_contig110246.839.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
HWQWVAFLSAGSTAIYVYMYSMYYFWFKTEQSGFLQVSFYFGYMGLFCVA
LAVMCGSIGVLGSTVFVKQIYRNIKVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004240EMP70