mRNA_H-elongata_contig11007.825.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: D8LGS1_ECTSI (Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGS1_ECTSI) HSP 1 Score: 395 bits (1015), Expect = 7.340e-127 Identity = 181/257 (70.43%), Postives = 209/257 (81.32%), Query Frame = 1
Query: 4 PLDPDSEEDKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKLDLRGRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSSRWFANLAKARR 774
PLDPDS+ DKA A RFVEFQL WWADPIYFGDYP+VM+ VG+RLP FT++E LI GSNDFFGLNHYTSWY+TDIPD DPPR GTS +KARAAG+ LPET PGDGW DIG +QTK+DL G NG A DWLT PEGFR LL +V+ RYGRPII VTENG+ RAGE + L+EA++D+ RQ +Y Y+ SMV ++VED VDVR +YAWSILDNFEWSDG+ PRFGLT+VDYD Q R PKDSS+WFA+LAKARR
Sbjct: 225 PLDPDSDADKATAERFVEFQLAWWADPIYFGDYPQVMKDLVGDRLPVFTEEESALIAGSNDFFGLNHYTSWYYTDIPDEDPPREGTSPAKARAAGITLPETPPGDGWSMDIGAIQTKMDLNGTMNGGAAATDWLTIAPEGFRPLLVWVASRYGRPIIFVTENGVDRAGEDEMELEEALKDEARQSYYHGYITSMVTAMVEDAVDVRGYYAWSILDNFEWSDGYRPRFGLTFVDYDNGQARYPKDSSKWFASLAKARR 481
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: A0A6H5JDJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDJ5_9PHAE) HSP 1 Score: 389 bits (999), Expect = 4.150e-124 Identity = 177/257 (68.87%), Postives = 208/257 (80.93%), Query Frame = 1
Query: 4 PLDPDSEEDKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKLDLRGRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSSRWFANLAKARR 774
PLDPDS+ DKA A RF+EFQL WWADPIYFGDYP+VM+ VG+RLP FT++E LI GSNDFFGLNHYTSWY+TDIPD DPPR GTS +KARAAG+ LPET PGDGW DIG +QTK+DL G NG A DWLT PEGFR LL +V+ RYGRPII +TENG+ RAGE + L+EA++D+ R+ +Y Y+ SMV ++VED VDVR +YAWSILDNFEWSDG+ PRFGLTYVDYD R PKDSS+WFA+LA+ARR
Sbjct: 250 PLDPDSDADKATAERFMEFQLAWWADPIYFGDYPQVMKDVVGDRLPVFTEEESALIAGSNDFFGLNHYTSWYYTDIPDEDPPREGTSPAKARAAGITLPETPPGDGWAMDIGAIQTKMDLNGTMNGGAAATDWLTIAPEGFRPLLVWVASRYGRPIIFITENGVDRAGEDEMELEEALKDEARRSYYHGYITSMVTAMVEDAVDVRGYYAWSILDNFEWSDGYRPRFGLTYVDYDNGLARYPKDSSKWFASLAEARR 506
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: A0A162IDG4_9PEZI (Beta-glucosidase n=1 Tax=Sporothrix insectorum RCEF 264 TaxID=1081102 RepID=A0A162IDG4_9PEZI) HSP 1 Score: 222 bits (565), Expect = 3.990e-62 Identity = 114/247 (46.15%), Postives = 152/247 (61.54%), Query Frame = 1
Query: 4 PLDPDSEEDKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKLDLR-GRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSS 741
P DP+ ED AAA R +EF + W+ADPIYFG YP MR ++G+RLP FTD+E L+ GSNDF+G+NHYT+ + + P T P D + +G L+T + + G G TQ WL P GFR LL ++S RYGRP I VTENG + GE+ LP+ + D R +YD Y+ +M A++ EDGVDVR + AWS++DNFEW++G+ RFG+TYVDY Q R PKDS+
Sbjct: 246 PWDPEDPEDVAAAERKIEFAISWFADPIYFGHYPASMRAQLGDRLPTFTDEERALVQGSNDFYGMNHYTANFIR----------------------HKPGTPPADDF---LGHLETLFESKQGATIGPETQSFWLRPHPAGFRDLLGWLSRRYGRPKIYVTENGTSIKGENDLPVPAVLHDDFRTRYYDGYVRAMAAAVAEDGVDVRGYMAWSLMDNFEWAEGYETRFGVTYVDYAHGQKRLPKDSA 467
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: A0A7S2FHU7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHU7_9STRA) HSP 1 Score: 222 bits (565), Expect = 4.950e-62 Identity = 113/253 (44.66%), Postives = 147/253 (58.10%), Query Frame = 1
Query: 1 QPLDPDSEEDKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKLDLRGRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSSRWFANL 759
+PLD AA RFVEF+L W+ADPI+ GDYP VM+ RVG+RLP FT E + G+ DFFGLNHYTS + +S GD W D G DL G P G + WL VP GFR L +V +RY P I+VTENG++ GES L++A+ D R ++Y Y+ +M +I EDGVDV ++AWS +DNFEW+DG+ RFG+ YVDYD E R KDSS+W+ ++
Sbjct: 256 EPLDSTDATSVEAAERFVEFELAWYADPIFLGDYPAVMKARVGDRLPTFTKAEKEALLGAQDFFGLNHYTSKFIASSGESG-----------------------GDSWGGDCGTTSYTKDLDGNPIGADSDSSWLKVVPWGFRKSLNWVKDRYDSPTIIVTENGVSVPGESDAALEDALADSFRIDFYSQYIGNMSLAISEDGVDVAGYFAWSFMDNFEWTDGYNVRFGMHYVDYDTE-TRYAKDSSKWYKDV 484
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: A0A2B7Z549_9EURO (Uncharacterized protein n=1 Tax=Polytolypa hystricis UAMH7299 TaxID=1447883 RepID=A0A2B7Z549_9EURO) HSP 1 Score: 215 bits (547), Expect = 1.520e-59 Identity = 109/253 (43.08%), Postives = 156/253 (61.66%), Query Frame = 1
Query: 4 PLDPDSEEDKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKL-DLRGRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSSRWFANL 759
P DP++ D A R +EF + W+ADP+YFG YP MR+++G+RLP FT+++ L+ GSNDF+G+NHY + Y +N T E P D +G L++ L D G P G TQ WL PEGFR LL+++S+RYG+P I VTENG + GE+ LP+D+ + D+ R ++ Y+ +M S DGV+VR++ AWS+LDNFEW++G+ RFG+TYVDY+ Q R PK S++ N
Sbjct: 244 PWDPENPADVEACDRKIEFSISWFADPVYFGKYPDSMRKQLGDRLPEFTEEDAALVKGSNDFYGMNHYCANYI---------KNKTG------------EADPDD----FLGNLESLLEDKNGTPVGPETQSAWLQPHPEGFRKLLKWLSDRYGKPKIYVTENGTSLKGENDLPIDQLLNDEFRVNYFRGYIAAMADSYTLDGVNVRAYMAWSLLDNFEWAEGYETRFGVTYVDYEGGQKRHPKKSAKEIGNF 471
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: UPI001D80AB65 (Beta-glucosidase 1B n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001D80AB65) HSP 1 Score: 214 bits (545), Expect = 2.400e-59 Identity = 110/248 (44.35%), Postives = 153/248 (61.69%), Query Frame = 1
Query: 1 QPLDPDSEEDKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKLDLRGRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSSR 744
+P DP D A +R +EF +GW+ADPIY GDYP MRQ++GERLP F+ DE L+ GSNDF+G+NHYT+ Y DI D +P + +G ++ +L K++ G G TQ WL P GFR L+ ++S+RYG+PII VTENG + GE+ LP+++ + D R E++ Y+ + + DGVDVR + AWS+LDNFEW++G+ RFG+TYVDY Q R PK S+R
Sbjct: 235 EPWDPADPRDVQACQRKLEFTIGWFADPIYKGDYPASMRQQLGERLPEFSADEQALLHGSNDFYGMNHYTADYIRDIQD-------------------IPAEANSNG---NVEIL--KVNKAGDTIGPETQSVWLRPYPVGFRKLMRWISDRYGKPIIYVTENGTSLKGENDLPVEQLLEDDFRAEYFRNYITELAKAQNLDGVDVRGYMAWSLLDNFEWAEGYETRFGVTYVDYTGGQKRYPKKSAR 458
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: A0A4U6T6R7_SETVI (Uncharacterized protein n=5 Tax=Setaria TaxID=4554 RepID=A0A4U6T6R7_SETVI) HSP 1 Score: 211 bits (538), Expect = 6.190e-59 Identity = 107/244 (43.85%), Postives = 145/244 (59.43%), Query Frame = 1
Query: 28 DKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKLDLRGRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSSRWFANL 759
D AA+R EFQLGW+ DP +FGDYP+ MR R+G+RLP FT DE L+ GS DF G+NHYT+ Y D ++ + A GL L DG M D G + D++ P G WL VP G R ++ YV ERY P + +TENGM + +P +EA++D +R +++ YL ++ ASI EDG DVR ++ WS+LDN+EW G+ RFGL +VDY+ R PK S +WF L
Sbjct: 184 DIEAAKRAQEFQLGWFVDPFFFGDYPESMRARIGDRLPKFTADEAALVKGSLDFVGINHYTTHYTMD----------SNTVSSTAMGLLL------DGTMADTGAVSVPFDIKN-PTGDRANSLWLYIVPWGMRKVMNYVKERYKSPPVYITENGMDDSNNPLIPKEEALKDSKRIKYHHDYLTNLAASIKEDGCDVRGYFVWSLLDNWEWIAGYTSRFGLYFVDYENNLERCPKSSVQWFKTL 410
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: J3NKB4_GAET3 (Beta-glucosidase A n=2 Tax=Magnaporthaceae TaxID=81093 RepID=J3NKB4_GAET3) HSP 1 Score: 212 bits (539), Expect = 2.030e-58 Identity = 107/248 (43.15%), Postives = 152/248 (61.29%), Query Frame = 1
Query: 4 PLDPDSEEDKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKL-DLRGRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSSR 744
P DP+ D AA R +EF + W+ADP+YFG YPK M++++G+RLP FT +E L+ GSNDF+G+NHYT+ Y +PP + +G L+T G G TQ WL P+GFR LL ++S+RYGRP I VTENG + GE+ +PL+ ++D R +++D Y+ +M A++ EDGVDVR + AWS++DNFEW++G+ RFG+T+VDY Q R PK S+R
Sbjct: 241 PWDPEDPADVEAADRKIEFAISWFADPVYFGHYPKSMKKQLGDRLPTFTPEEEALVKGSNDFYGMNHYTANYIKH-KTGEPPADDF------------------------LGNLETLFWSKSGECIGEETQSFWLRPNPQGFRDLLNWLSKRYGRPKIYVTENGTSVKGENDMPLERILKDDFRVKYFDGYVKAMAAAVAEDGVDVRGYSAWSLMDNFEWAEGYETRFGVTFVDYKNGQKRYPKKSAR 463
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: F0XPY8_GROCL (Beta-galactosidase n=1 Tax=Grosmannia clavigera (strain kw1407 / UAMH 11150) TaxID=655863 RepID=F0XPY8_GROCL) HSP 1 Score: 213 bits (541), Expect = 2.420e-58 Identity = 110/246 (44.72%), Postives = 150/246 (60.98%), Query Frame = 1
Query: 4 PLDPDSEEDKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKLDLRGRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSS 741
P DP+ ED AAA+R +EF + W+ADPIYFG YP+ MR ++G+RLP+FT+ E L+ GSNDF+G+NHYT+ Y P S + + LP + G+ W+ G TQ WL P GFR LL ++S RYGRP + VTENG + GE+SLP E D R ++D Y+++M ++ +DGVDVR + AWS+LDNFEW++G+ RFG+TYVDY Q R PK S+
Sbjct: 266 PWDPEDGEDVAAAQRKLEFSIAWFADPIYFGHYPESMRAQLGDRLPSFTEAERQLVQGSNDFYGMNHYTADYVRHRPGSPAVEDFVGHLET------LPVSRAGE-WI-----------------GPETQSTWLRPNPGGFRTLLGWISRRYGRPRVYVTENGTSIKGENSLPTAEVTDDVFRVRYFDEYVHAMAEAVRDDGVDVRGYMAWSLLDNFEWAEGYETRFGVTYVDYAGGQQRHPKKSA 487
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Match: A0A835EXM9_9POAL (Uncharacterized protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835EXM9_9POAL) HSP 1 Score: 210 bits (535), Expect = 3.310e-58 Identity = 105/244 (43.03%), Postives = 144/244 (59.02%), Query Frame = 1
Query: 28 DKAAARRFVEFQLGWWADPIYFGDYPKVMRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTSASKARAAGLNLPETSPGDGWMQDIGVLQTKLDLRGRPNGFATQVDWLTAVPEGFRLLLEYVSERYGRPIIMVTENGMARAGESSLPLDEAVRDKERQEWYDAYLYSMVASIVEDGVDVRSFYAWSILDNFEWSDGFAPRFGLTYVDYDAEQIRTPKDSSRWFANL 759
D AA+R EFQLGW+ADP +FGDYP MR+RV ERLP FT DE L+ G+ DF G+NHYT++Y T + G L +T + D G + D G+P G WL VP G R L+ YV ERY P + +TENGM + +++A++D +R ++++ YL ++ ASI EDG DVR ++AWS+LDN+EW+ G+ RFGL +VDY R PK+S +WF L
Sbjct: 213 DIEAAKRAQEFQLGWFADPFFFGDYPATMRKRVAERLPKFTADESALVKGALDFMGINHYTTFY-------------TRNNNTNIIGKLLNDT------LADTGTVSLPFDKNGKPIGDRANSIWLYIVPSGMRKLMNYVKERYNSPTVYITENGMDDSNNPFTSINDALKDSKRIKYHNDYLTNLAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYRDNLKRYPKNSVQWFKTL 437 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11007.825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11007.825.1 >prot_H-elongata_contig11007.825.1 ID=prot_H-elongata_contig11007.825.1|Name=mRNA_H-elongata_contig11007.825.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=289bp MRQRVGERLPNFTDDELLLITGSNDFFGLNHYTSWYFTDIPDSDPPRNGTback to top mRNA from alignment at H-elongata_contig11007:847..4352- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11007.825.1 ID=mRNA_H-elongata_contig11007.825.1|Name=mRNA_H-elongata_contig11007.825.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3506bp|location=Sequence derived from alignment at H-elongata_contig11007:847..4352- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11007:847..4352- >mRNA_H-elongata_contig11007.825.1 ID=mRNA_H-elongata_contig11007.825.1|Name=mRNA_H-elongata_contig11007.825.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1734bp|location=Sequence derived from alignment at H-elongata_contig11007:847..4352- (Himanthalia elongata Himel1 dioecious)back to top |