prot_H-elongata_contig110065.824.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110065.824.1
Unique Nameprot_H-elongata_contig110065.824.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length206
Homology
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 132 bits (331), Expect = 6.460e-32
Identity = 80/224 (35.71%), Postives = 123/224 (54.91%), Query Frame = 0
Query:    1 MGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQVGLLKKAMYGL----------VHARLPT---------QCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            + EAQAS EW +W++A+  E D     G W++ + PK +  +G + VF++K +K+G+  KYK RLVAQG+ Q+  M + E+++P     SIR +L++ V   WE  Q+DV  AYL  D++EEIY+  PE + D   ++  L+K +YGL          +H  L            CV+        V +I V+VDDLL+ + +    E+  RDL   F + DLG
Sbjct:  910 LAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLG 1133          
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A177TV96_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TV96_9BASI)

HSP 1 Score: 129 bits (324), Expect = 5.500e-31
Identity = 74/216 (34.26%), Postives = 124/216 (57.41%), Query Frame = 0
Query:    9 EWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQVGLLKKAMYGLVHA------------------RLPTQ-CVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            EW  WK A+  E+   +    W++VE PKG+ V+G+R V+K KLD+DGR  +YK RLVAQGF Q   + + ++++P +  ++IR+++S+ +AL      +D+  AYL   ++EE+Y++ P  Y D   +V LL++A+YGL  A                  ++ ++ C+F R       V++ VYVDD+++A+  K   +Q  ++  S F I D G
Sbjct:  704 EWRHWKEAMDEEIGSLVEMKTWELVELPKGRDVVGSRWVYKLKLDRDGRASRYKGRLVAQGFTQRDGIDFSDTFAPVARLSTIRIIISLALALSLNLGSIDIKTAYLNGKLQEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAWFDTLKGKLLSAGYTQIQSEPCLFVRF-GDAGPVILAVYVDDIVIAARGKEGVDQVKKEFASWFKITDNG 918          
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY)

HSP 1 Score: 129 bits (323), Expect = 7.310e-31
Identity = 79/225 (35.11%), Postives = 122/225 (54.22%), Query Frame = 0
Query:    4 AQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQVGLLKKAMYGLVHARLPTQCVFRRILHGIV-----------------------VVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            AQAS EWS+W++A+  E D     G W++ + PK +  +G + VF++K +K+ +  KYK RLVAQG+ Q+  M + E+++P     SIR +L++ V   WE  Q+DV  AYL  D++EEIY+  PE + D   ++  L+K +YGL  +     C + R LH  +                       V +I V+VDDLL+ + +    E+  RDL   F + DLG
Sbjct:  718 AQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSG----CKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLG 938          
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: D1CS18_ORYSJ (Integrase catalytic domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=D1CS18_ORYSJ)

HSP 1 Score: 129 bits (323), Expect = 7.630e-31
Identity = 78/215 (36.28%), Postives = 118/215 (54.88%), Query Frame = 0
Query:   13 WKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQ--VGLLKKAMYGLVHA--------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            WK A+  E D  I    W +V   KG+ V+G + V+K K   DG  ++YK RLVA+GF+Q   + YE+++SP    A+IR++LS+ V+ GW  RQLDV  A+L   +EEE+Y++ P  +  F K   V  L KA+YGL  A                    +  T   F     G +++ ++VYVDD+++AS+T+      ++DL   F +KDLG
Sbjct:  940 WKAAMEAEYDALIKNDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLN--KGGIIMFVLVYVDDIIIASSTEKATTALLKDLNKEFALKDLG 1152          
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 127 bits (320), Expect = 1.920e-30
Identity = 80/224 (35.71%), Postives = 122/224 (54.46%), Query Frame = 0
Query:    1 MGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQVGLLKKAMYGLVHA----------RLPT---------QCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            + EA+AS EW++WK+A+  EM      G +   + P G+  +G + VF +K D+DG   +YK RLVAQG+ Q+  + Y E+++P     S+R  L +      E  Q+DV  AYL  ++EEEIY+  PE Y D   +V  L+K +YGL  +          +L +          CV++RI  G + + I V+VDDLL+ S T  D  +   +L + F +KDLG
Sbjct:  882 VAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTI-ITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLG 1104          
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A3L6R200_PANMI (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6R200_PANMI)

HSP 1 Score: 123 bits (308), Expect = 5.790e-30
Identity = 78/213 (36.62%), Postives = 117/213 (54.93%), Query Frame = 0
Query:   13 WKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQ--VGLLKKAMYGLVHA------RLPTQCVFRRIL------------HGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            WK A+  E +  +    W +V   KG+ ++G + V+K K   DG  ++YK RLVA+ F+Q   + YE+++SP    A+IR+VLS+ V+ GW  RQLDV  A+L   +EEE+Y++ P  + D  K   V  L KA+YGL  A      RL  + V  R               G +++ ++VYVDD++VAS+T       + DL   F +KDLG
Sbjct:   98 WKAAMDLEYEALMKNNTWHLVPPHKGRNIIGCKWVYKIKRKSDGSLDRYKARLVAKEFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSCGWSLRQLDVQNAFLHGLLEEEVYMQQPPGFEDPNKPRYVCKLDKALYGLKQAPRAWYSRLSEKLVELRFKASKADTSLFYFSKGGIIMFVLVYVDDIIVASSTPQATSALLGDLKEDFALKDLG 310          
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A2N9J7I7_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J7I7_FAGSY)

HSP 1 Score: 124 bits (312), Expect = 2.160e-29
Identity = 77/224 (34.38%), Postives = 124/224 (55.36%), Query Frame = 0
Query:    3 EAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAY--RDFRKQVGLLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            +A +  E   W  A+  EM+   S GVW +VE P G   +G + VFK K D  G  E+YK RLVA+GF Q + + Y E++SP S + S+R++L+++     E +Q+DV  A+L  D+EEE+Y++ PE +   D  + V  LKK++YGL  A                    +  QC+++++  G  +  +V+YVDD+L+A+  K    +  + L   F +KD+G
Sbjct:  499 QAMSCKESELWYNAMKEEMNSMKSNGVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRVILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFLSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMG 721          
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A2N9EM55_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EM55_FAGSY)

HSP 1 Score: 124 bits (312), Expect = 2.220e-29
Identity = 77/224 (34.38%), Postives = 124/224 (55.36%), Query Frame = 0
Query:    3 EAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAY--RDFRKQVGLLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            +A +  E   W  A+  EM+   S GVW +VE P G   +G + VFK K D  G  E+YK RLVA+GF Q + + Y E++SP S + S+R++L+++     E +Q+DV  A+L  D+EEE+Y++ PE +   D  + V  LKK++YGL  A                    +  QC+++++  G  +  +V+YVDD+L+A+  K    +  + L   F +KD+G
Sbjct:  691 QAMSCKESELWYNAMKEEMNSMKSNGVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRVILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFLSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMG 913          
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A392MGQ0_9FABA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MGQ0_9FABA)

HSP 1 Score: 123 bits (308), Expect = 2.420e-29
Identity = 70/213 (32.86%), Postives = 116/213 (54.46%), Query Frame = 0
Query:   12 QWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYR-DFRKQVGLLKKAMYGLVHARLPTQCVFRRIL------------------HGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            +W+ A+++E+        W++   PKGK  +G R V+K K    G  EKYK RLVA+G+ QV+   + E+++P +   ++R +L++ VA GWE  Q+DV  A+L  +++EE+Y+E+P  Y+   ++ V  L+K++YGL  A         + L                  HG   +V+++YVDDL+V        E+  + L  CF +KDLG
Sbjct:  202 EWREAMSQELKALEENKTWEMSRLPKGKKAVGCRWVYKVKYKSTGEVEKYKARLVAKGYTQVEGDDFNETFAPVAKMTTVRCLLTVAVAKGWELHQMDVSNAFLHGELDEEVYMEVPPGYKVPDKEMVCRLRKSLYGLRQASRNWYSKLSQALVKYGFQECEADHSLFTYSHGSTFIVVLIYVDDLVVTGNDAKSCEKFKQYLSKCFHMKDLG 414          
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A2N9IKJ5_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IKJ5_FAGSY)

HSP 1 Score: 124 bits (310), Expect = 4.010e-29
Identity = 77/224 (34.38%), Postives = 123/224 (54.91%), Query Frame = 0
Query:    3 EAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAY--RDFRKQVGLLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG 205
            +A +  E   W  A+  EM+   S GVW +VE P G   +G + VFK K D  G  E+YK RLVA+GF Q + + Y E++SP S + S+R++L+++     E +Q+DV  A+L  D+EEE+Y++ PE +   D    V  LKK++YGL  A                    +  QC+++++  G  +  +V+YVDD+L+A+  K    +  + L   F +KD+G
Sbjct:  549 QAMSCKESELWYNAMKEEMNSMKSNGVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFPSSDGEHLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMG 771          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GYH9_9APHY6.460e-3235.71Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A177TV96_9BASI5.500e-3134.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A401H727_9APHY7.310e-3135.11Integrase catalytic domain-containing protein n=1 ... [more]
D1CS18_ORYSJ7.630e-3136.28Integrase catalytic domain-containing protein n=2 ... [more]
A0A284QR88_ARMOS1.920e-3035.71Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A3L6R200_PANMI5.790e-3036.62Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A2N9J7I7_FAGSY2.160e-2934.38Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9EM55_FAGSY2.220e-2934.38Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A392MGQ0_9FABA2.420e-2932.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9IKJ5_FAGSY4.010e-2934.38Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 14..143
e-value: 1.1E-5
score: 26.8
NoneNo IPR availableGENE3D3.30.70.270coord: 82..197
e-value: 1.1E-5
score: 26.8
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 11..151
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 29..196
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..152
e-value: 7.0E-29
score: 101.2
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 11..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110065contigH-elongata_contig110065:596..1270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110065.824.1mRNA_H-elongata_contig110065.824.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110065 575..2109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110065.824.1 ID=prot_H-elongata_contig110065.824.1|Name=mRNA_H-elongata_contig110065.824.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
MGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQ
KLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVA
LGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQVGLLKKAMYGLVH
ARLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFL
IKDLG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like