prot_H-elongata_contig110064.822.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110064.822.1
Unique Nameprot_H-elongata_contig110064.822.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig110064.822.1 vs. uniprot
Match: D7G3I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I5_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 5.410e-28
Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 0 
Query:    1 PGGSGKRVVDREAYNRMFPGGAMLNMKGFTLKEKSAVSAAFELCAAMEPKSRPKFEHKD-GIKSNSSPFTLHVSVNGVNYTPAT 83
            P GSGK V+D  A+ RM+PGGA+LNMK F LK+KSAVSAAFE+CAAMEPKSRP FE+K+     N SPFTL+VSVNGV Y+PAT
Sbjct:  832 PPGSGKMVLDELAHARMYPGGAVLNMKSFKLKQKSAVSAAFEMCAAMEPKSRPSFENKNKDAAKNISPFTLNVSVNGVAYSPAT 915
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110064.822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3I5_ECTSI5.410e-2870.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110064contigH-elongata_contig110064:780..2181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110064.822.1mRNA_H-elongata_contig110064.822.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110064 780..2181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110064.822.1 ID=prot_H-elongata_contig110064.822.1|Name=mRNA_H-elongata_contig110064.822.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
PGGSGKRVVDREAYNRMFPGGAMLNMKGFTLKEKSAVSAAFELCAAMEPK
SRPKFEHKDGIKSNSSPFTLHVSVNGVNYTPAT
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