prot_H-elongata_contig110028.819.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110028.819.1
Unique Nameprot_H-elongata_contig110028.819.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
[Close]
BLAST of mRNA_H-elongata_contig110028.819.1 vs. uniprot
Match: A0A6H5KJ39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ39_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.590e-16
Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 0 
Query:    3 LEVLMFPGVVSSGPAGGICALGKFADGRQEYYRVTSCTTDEETDKVP-VGPTPSPTPLPPIAYQPVESDSAPVDYRGDGDDEDL 85
            LE++MF   V +   GG+CALG F DG +EYYRV +CTT+EET+K P +GPT               + +APVDYRGDGDDEDL
Sbjct:  237 LEMIMFARAVDNDTNGGMCALGHFEDGHEEYYRVKACTTEEETEKNPDIGPTXXXXXXXXXXXXDSHNAAAPVDYRGDGDDEDL 320
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110028.819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ39_9PHAE1.590e-1652.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110028contigH-elongata_contig110028:255..1097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110028.819.1mRNA_H-elongata_contig110028.819.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110028 255..1119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110028.819.1 ID=prot_H-elongata_contig110028.819.1|Name=mRNA_H-elongata_contig110028.819.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
MYLEVLMFPGVVSSGPAGGICALGKFADGRQEYYRVTSCTTDEETDKVPV
GPTPSPTPLPPIAYQPVESDSAPVDYRGDGDDEDL
back to top