mRNA_H-elongata_contig10999.812.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10999.812.1
Unique NamemRNA_H-elongata_contig10999.812.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Match: D7G823_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G823_ECTSI)

HSP 1 Score: 651 bits (1679), Expect = 1.060e-229
Identity = 341/518 (65.83%), Postives = 389/518 (75.10%), Query Frame = 1
Query:    4 SPQTWPEEDSEERIAYQMLHGMRRADGSVLPSVTLHAVREGGGGDAHFVEAFYSSDARSWLLVAGVDPAGPSAGGRLRRWEGLGIAQRVAKAAGTGGQIHFIGERHKGDALLRFVDRWEVEHCGESGGGALRGGPLGRMSYQPVQVGRSAASLETLYGKMLHAIGESAALELWTRLAVEDWLVRTVSRAEFPFSHRHQLADFSPAGSGELT--ASRGVAGAVLLTSPAAAAAAAADMPCPLHDGKRH-DRDAFCLSVFEHLCRNALFRRLRLPHRFQTLVTVQLLGLKNLSPNYHPSKTEVFAAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMG-----DSVLRRRGRNTSVTSVKTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGSG-GGMGSQGPPRYVRIVVWKKLFLVDQRLGEVEVPLGNLNDRVDVDEWVALRGDKGSYWFVNVRFSLRFVMVSASDPIPCD-DTEYYEGD--HSDTPGMTLSHALEDVDVM 1521
            S + WP+EDSEER+AYQ+L+GMRR DGS L SV LHAVREG G D HFVEAFY+SDAR WL  + VDPAGP+AG R+R+WE +GI QRV KA   G QIHF G RH GDALLRFVDRW+VEHCGES G ALR GPLGR+SYQ V  G SA    TL+G++L+AIGE AA ELWTRL  EDWLVRTV+RAEFPFS+RHQLA+ +      +   A   V  A             AD+PC LHDG R  +RDA+CL VFEHLCRNALFRRLRLPHRFQ LV+VQLLGLKNLSP+YHP+KT+VFAAV+LKR D      T    NG+D               ++  +RRGRNTSVT++K LLPTANGQ +QQSRWGAKAAFRFPLPEEASP VL YGD AYELVMGG+G GGMGSQGPPR VRI VW+K FL DQRLGEV+VPLG L+DR D+DEWVALRGDKGS WFVNVRFSLRFVMVS SDP+P + D+E         + PGMTLS AL DVD++
Sbjct:   17 SDEAWPDEDSEERVAYQLLNGMRRPDGSALASVPLHAVREGAGADTHFVEAFYASDARGWLTRSRVDPAGPAAGDRVRKWESMGIVQRVTKAERGGSQIHFRGGRHHGDALLRFVDRWDVEHCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEEAAAELWTRLGAEDWLVRTVARAEFPFSYRHQLAELASHRGSRVAPAADTAVTSAXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLD-----MTAAGGNGNDXXXXXXXXXXXXXXXEAAAKRRGRNTSVTAIKRLLPTANGQESQQSRWGAKAAFRFPLPEEASPLVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSDPVPDEEDSEDLAAVAVEEENPGMTLSFALADVDII 529          
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Match: A0A6H5K928_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K928_9PHAE)

HSP 1 Score: 650 bits (1678), Expect = 1.130e-207
Identity = 340/518 (65.64%), Postives = 390/518 (75.29%), Query Frame = 1
Query:    4 SPQTWPEEDSEERIAYQMLHGMRRADGSVLPSVTLHAVREGGGGDAHFVEAFYSSDARSWLLVAGVDPAGPSAGGRLRRWEGLGIAQRVAKAAGTGGQIHFIGERHKGDALLRFVDRWEVEHCGESGGGALRGGPLGRMSYQPVQVGRSAASLETLYGKMLHAIGESAALELWTRLAVEDWLVRTVSRAEFPFSHRHQLADFSPAGSGELTASRGVAGAVLLTSPAAAAAAA----ADMPCPLHDGKRH-DRDAFCLSVFEHLCRNALFRRLRLPHRFQTLVTVQLLGLKNLSPNYHPSKTEVFAAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMG-DSVLRRRGRNTSVTSVKTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGSG-GGMGSQGPPRYVRIVVWKKLFLVDQRLGEVEVPLGNLNDRVDVDEWVALRGDKGSYWFVNVRFSLRFVMVSASDPIPCDDTEYYE-----GDHSDTPGMTLSHALEDVDVM 1521
            S + WP+EDSEER+AYQ+L+GMRR DGS L SV LHAVREG G D HFVEAFY+SDAR WL  + VDPAGP+AG R+R+WE +GI QRV KA   G QIH  G RH GDALLRFVDRW+VEHCGES G ALR GPLGR+SYQ V  G SA    TL+G++L+AIGE AA ELWTRL  EDWLVRTV+RAEFPFS+RHQLA+ +      + A                        AD+PC LHDG R  +RDA+CL VFEHLCRNALFRRLRLPHRFQ LV+VQLLGLKNLSP+YHP+KT+VFAAV+LKR D + + +     NG+        H G ++  +RRGRNTSVT++K LLPTANGQ  QQSRWGAKAAFRFPLPEEASP+VL YGD AYELVMGG+G GGMGSQGPPR VRI VW+K FL DQRLGEV+VPLG L+DR D+DEWVALRGDKGS WFVNVRFSLRFVMVS SDP+P  D E+ E         + PGMTLS+AL DVD+M
Sbjct: 3444 SDEAWPDEDSEERVAYQLLNGMRRPDGSALASVPLHAVREGAGADTHFVEAFYASDARDWLTRSRVDPAGPAAGDRVRKWESMGIVQRVTKAERGGSQIHLRGGRHHGDALLRFVDRWDVEHCGESAGAALRAGPLGRVSYQLVPGGGSAPGRGTLHGELLYAIGEEAAAELWTRLGAEDWLVRTVARAEFPFSYRHQLAELAFHRGSHVAAXXXXXXXXXXXXXXXXXXXXXXXXADLPCSLHDGNRRPERDAYCLCVFEHLCRNALFRRLRLPHRFQALVSVQLLGLKNLSPHYHPAKTDVFAAVSLKRLDMTAAGSN---GNGNYAAXXXXGHSGGEAAAKRRGRNTSVTAIKRLLPTANGQENQQSRWGAKAAFRFPLPEEASPFVLAYGDGAYELVMGGTGKGGMGSQGPPRCVRIAVWRKQFLADQRLGEVDVPLGKLDDRGDIDEWVALRGDKGSSWFVNVRFSLRFVMVSVSDPVP--DQEHSEDLAAVAVEEENPGMTLSYALADVDIM 3956          
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Match: A0A7S3Y602_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y602_HETAK)

HSP 1 Score: 135 bits (339), Expect = 9.000e-33
Identity = 85/245 (34.69%), Postives = 130/245 (53.06%), Query Frame = 1
Query:  691 AAAADMPCPLHDGKRHDRDAFCLSVFEHLCRNALFRRLRLPHRFQTLVTVQLLGLKNLSPNYHPSKTEVFAAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMGDSVLRRRGRNTSVTSVKTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGSGGGMGSQGPPRYVRIVVWKKLFLVDQRLGEVEVPLGNLNDRVDVDEWVALRGDKGSYWFVNVRFSLRFVMVSASD 1425
            AA  D+  P   G  H  D +      HL R+ LF RLR+PHR+  LV  +LL LK L+P   P+K EV+A + L+R    GSS  L++                   + R  ++ +T  + ++  ++ ++T    WG KAAFRFPLPE    Y+   G   Y   +        ++G P+ + I V+ K F++D  LG+VE+PL  + D   +DEW+ LR +KG+ WF++V+  LRFV++S  D
Sbjct:   34 AARGDLAAP---GSLHGLDPYAACAARHLYRSLLFARLRMPHRYLALVQAELLDLKKLAPTPSPAKMEVYAVLRLQRR---GSSVVLSN-------------------KTRTLDSVMTQPEKIVTDSSSRSTP---WGGKAAFRFPLPEA---YLRLDGPADYRQAV--------NRGAPKVLHICVYSKHFIMDSCLGDVEIPLTAITDNNHLDEWLPLRCEKGTSWFLHVKLRLRFVLMSIVD 239          
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Match: A0A836C890_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C890_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.040e-32
Identity = 91/253 (35.97%), Postives = 127/253 (50.20%), Query Frame = 1
Query:  745 DAFCLSVFEHLCRNALFRRLRLPHRFQTLVTVQLLGLKNLSPNYHPSKTEVFAAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMGDSVLRRRGRNTSVTSVKTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGSGGGMGSQGPPRYVRIVVWKKLFLVDQRLGEVEVPLGNLNDRVDVDEWVALRGDK-------------------------GSYWFVNVRFSLRFVMVSASDP 1428
            D +   +FEHL RNAL RRLRLPHRF  LV V+L  LKNLSP++     +VFA   L+RG S+ +S            + HP  +G          ++VT    ++P A  +A +Q  WG    FR+ LPE+A P +   G  +   VM     G G+ GPP  +++ V+KK  L D  LG  EVPL +LN    +DEW  L+  K                         GS WF+N+R +LRFV++  ++P
Sbjct:   22 DPYSSCLFEHLARNALLRRLRLPHRFLALVQVELHDLKNLSPHFQAQPMDVFAVARLQRGASAPAS------------HKHPT-LG----------SAVTDAHRVVPCAEAKAGRQ--WGGATIFRYALPEDALPLIDVSGALSAPAVMRRHPAG-GAPGPPSVLQLAVFKKSLLSDDCLGGTEVPLHSLNAHTTLDEWYPLKHVKHKRWGKVGAEGGAGGTWGAGFTXGAGSSWFLNLRITLRFVVMLVAEP 248          
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Match: A0A1Z5JBW6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBW6_FISSO)

HSP 1 Score: 118 bits (296), Expect = 2.660e-24
Identity = 113/438 (25.80%), Postives = 175/438 (39.95%), Query Frame = 1
Query:  130 GGDAHFVEAFYSSDARSWLLVAGVDPAGPSAGGRLRRWEGLGIAQRVAKAAGTGGQIHFIGERHKGDAL-----LRFVDRWEVEHCGESGGGALRGGPLGRMSYQPVQVGRSAASLETLYGKMLHAIGESAALELWTRLAVEDWLVRTVSRAEFPFSHRHQLADFSPAGSGELTASRGVAGAVLLTSPAAAAAAAADMPCPLHDGKRHDRDAFCLSVFEHLCRNALFRRLRLPHRFQTLVTVQLLGLKNLSPNYHPSKTEVFAAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMGDSVLRRRGRNTSVTSVKTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGSGGGMGSQGPPRYVRIVVWKKLFLVDQRLGEVEVPLGNLNDRVDVDEWVALRGDKGSY-WFVNVRFSLRFVMVSASD 1425
            GG+   V  F  +DA  WL+ +G + +   A  RL   E     + V         +  +  +HKG A       RF+D WEVE   E+     R   LGR       + R + +L+ L    L AIG    L+LW  L     L + ++    P+                    R   G +++                   G    +  +  S+ + L R+++FR LRLP RF TL+ V+LL LKNL+         V+A +  KR              GH              L  + R     + + +  T +      + WG+   FRF LPE+  P   T  D   E +          +GPP ++++ V++K  LVD  LG  +V +  L     ++EWV LR DK S  WF  +R +LRF ++  ++
Sbjct: 2478 GGECTMVVLFKRNDALEWLVSSGYEQSEAEAANRLASMENARFIEPV--------DLSKLRLKHKGAATEEVVTYRFIDPWEVEAL-ENRDAETRSATLGRNKVLGFSLKRVSFALDPL----LLAIGGVPLLDLWNSLLGGVMLTKAIASLHPPWE-------------------RAAGGDLII-------------------GSESSQSPYVNSIRKMLYRDSIFRALRLPQRFITLLQVELLDLKNLTSPGGSLALTVYALLRPKRA-------------GHGAN-----------LTNKARTLDSAATQPIKLTKSSGPNAPASWGSVVRFRFALPEDV-PMDGTSRDSDQESIF---------KGPPTFLQLSVYEKKLLVDHLLGSADVSMDGLWPGGQLEEWVPLRSDKSSITWFARIRLTLRFELMCLAE 2830          
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Match: A0A1Z5JPQ6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPQ6_FISSO)

HSP 1 Score: 117 bits (292), Expect = 8.520e-24
Identity = 117/438 (26.71%), Postives = 175/438 (39.95%), Query Frame = 1
Query:  130 GGDAHFVEAFYSSDARSWLLVAGVDPAGPSAGGRLRRWEGLGIAQRVAKAAGTGGQIHFIGERHKGDAL-----LRFVDRWEVEHCGESGGGALRGGPLGRMSYQPVQVGRSAASLETLYGKMLHAIGESAALELWTRLAVEDWLVRTVSRAEFPFSHRHQLADFSPAGSGELTASRGVAGAVLLTSPAAAAAAAADMPCPLHDGKRHDRDAFCLSVFEHLCRNALFRRLRLPHRFQTLVTVQLLGLKNLSPNYHPSKTEVFAAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMGDSVLRRRGRNTSVTSVKTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGSGGGMGSQGPPRYVRIVVWKKLFLVDQRLGEVEVPLGNLNDRVDVDEWVALRGDKGSY-WFVNVRFSLRFVMVSASD 1425
            GG+   V  F  +DA  WL+  G D     A  RL   E     + V         +  +  +HKG A       RF+D WEVE   E+     R   LGR       + R + +L+ L    L AIG +  L+LW  L     L + ++    P+                    R   G +++                   G    +  +  S+ + L R+++FR LRLP RF TL+ V+LL LKNL+         V+A +  KR              GH     +     DS   +      V   K+  P A       + WG+   FRF LPE+ S    T  D   E +          +GPP ++++ V++K  LVD  LG  +V +  L     ++EWV LR DK S  WF  +R +LRF ++  ++
Sbjct: 2600 GGECTMVVLFKRNDALEWLVSGGYDQNEVEAANRLASMENARFIEPV--------DLSKLRLKHKGAATEEVVTYRFIDPWEVEAL-ENRDAETRAATLGRSKVLGFSLKRVSFALDPL----LLAIGGAPLLDLWNSLQGGVMLTKAIASLHPPWE-------------------RAAGGDLII-------------------GSESSQSPYMNSIRKMLYRDSIFRALRLPQRFITLLQVELLDLKNLTSPGGSLALTVYALLRPKRA-------------GHGANLTNKARTLDSAATQ-----PVKLTKSTGPNA------PASWGSVVRFRFGLPEDVS-MDGTSKDSDQESIF---------KGPPTFLQLSVYEKKLLVDHLLGSADVSMDGLWPGGQLEEWVPLRSDKSSITWFARIRLTLRFELMCLAE 2952          
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Match: A0A7S3V8S0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8S0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.920e-21
Identity = 122/452 (26.99%), Postives = 178/452 (39.38%), Query Frame = 1
Query:  100 VTLHAVREGGGGDAHFVEAFYSSDARSWLLVAGVDPAGPSAGGRLRRWEGLGIAQRVAKAAGTGGQIHFIG-ERH-----------KGDALLRFVDRWEVEHCGESGGGALRGGPLGRMSYQPVQVGRSAASLETLYGKMLHAIGESAALELWTRLAVEDWLVRTVSRAEFPFSHRHQLADFSPAGSGELTASRGVAGAVLLTSPAAAAAAAADMPCPLHDGKRHDRDAFCLSVFEHLCRNALFRRLRLPHRFQTLVTVQLLGLKNL-SPNYHPSKTEVFAAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMGDSVLRRRGRNTSVTSVKTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGSGGGMGSQGPPRYVRIVVWKKLFLVDQRLGEVEVPLGNLNDRVDVDEWVALRGDKGSY-WFVNVRFSLRFVMV 1413
            V    +R G  G +  V  F  S A  W++ +G +     A  RL   E   + ++V         I+ I  E+H           K +   RFVD WEVE   ES    LRG  LGR  Y P  +G  A + E       H +G    L LW        L + ++    P+           AG G+L    G+     +T P                        +  S  +HL RNALFRRLRLP RF   + V++L LKNL SP   PS T  +A + LKR  S                        ++ L  + R     S      +        + WG+   FRFPLPE  +   +++ D   E +          +G P  ++I  ++K F+ +  LG  ++ L  L+    ++EWV LR       WFV +R +LRF ++
Sbjct:  706 VEFRTLRVGEAGHSAVVVLFRKSQAIKWMIKSGAESDETDAVKRLDIMEKRRVIEQV--------DINTIAFEKHQDSDDNEFTEYKKEIRYRFVDPWEVETI-ESKDAELRGASLGRQHYVPFTIGAVARACED---SQRH-LGGLHLLSLWAIARGGVCLTKALASVYPPWER--------DAG-GDLQVREGI-----VTQPT----------------------TYANSFRQHLYRNALFRRLRLPQRFLAFIQVEILDLKNLTSPGGSPSVT-AYALLRLKRDAS------------------------NAPLTHKARTLDSVSTDPKKISRGSGPNAPASWGSVVRFRFPLPEGVNCDGVSF-DSDREALF---------KGAPSVLQISAYEKKFMTNSSLGGADIHLDALSTSGQLEEWVPLRSINDEITWFVRLRLTLRFELM 1073          
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Match: A0A7S3V901_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V901_9STRA)

HSP 1 Score: 108 bits (269), Expect = 6.000e-21
Identity = 122/452 (26.99%), Postives = 178/452 (39.38%), Query Frame = 1
Query:  100 VTLHAVREGGGGDAHFVEAFYSSDARSWLLVAGVDPAGPSAGGRLRRWEGLGIAQRVAKAAGTGGQIHFIG-ERH-----------KGDALLRFVDRWEVEHCGESGGGALRGGPLGRMSYQPVQVGRSAASLETLYGKMLHAIGESAALELWTRLAVEDWLVRTVSRAEFPFSHRHQLADFSPAGSGELTASRGVAGAVLLTSPAAAAAAAADMPCPLHDGKRHDRDAFCLSVFEHLCRNALFRRLRLPHRFQTLVTVQLLGLKNL-SPNYHPSKTEVFAAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMGDSVLRRRGRNTSVTSVKTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGSGGGMGSQGPPRYVRIVVWKKLFLVDQRLGEVEVPLGNLNDRVDVDEWVALRGDKGSY-WFVNVRFSLRFVMV 1413
            V    +R G  G +  V  F  S A  W++ +G +     A  RL   E   + ++V         I+ I  E+H           K +   RFVD WEVE   ES    LRG  LGR  Y P  +G  A + E       H +G    L LW        L + ++    P+           AG G+L    G+     +T P                        +  S  +HL RNALFRRLRLP RF   + V++L LKNL SP   PS T  +A + LKR  S                        ++ L  + R     S      +        + WG+   FRFPLPE  +   +++ D   E +          +G P  ++I  ++K F+ +  LG  ++ L  L+    ++EWV LR       WFV +R +LRF ++
Sbjct: 1677 VEFRTLRVGEAGHSAVVVLFRKSQAIKWMIKSGAESDETDAVKRLDIMEKRRVIEQV--------DINTIAFEKHQDSDDNEFTEYKKEIRYRFVDPWEVETI-ESKDAELRGASLGRQHYVPFTIGAVARACED---SQRH-LGGLHLLSLWAIARGGVCLTKALASVYPPWER--------DAG-GDLQVREGI-----VTQPT----------------------TYANSFRQHLYRNALFRRLRLPQRFLAFIQVEILDLKNLTSPGGSPSVT-AYALLRLKRDAS------------------------NAPLTHKARTLDSVSTDPKKISRGSGPNAPASWGSVVRFRFPLPEGVNCDGVSF-DSDREALF---------KGAPSVLQISAYEKKFMTNSSLGGADIHLDALSTSGQLEEWVPLRSINDEITWFVRLRLTLRFELM 2044          
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Match: A0A8J2WZR4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZR4_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 8.850e-11
Identity = 73/251 (29.08%), Postives = 102/251 (40.64%), Query Frame = 1
Query:  775 LCRNALFRRLRLPHRFQTLVTVQLLGLKNLSPNYHPSKTEV-------------FAAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMGDSVLRRRGRNTSVTSVKTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGSGGGMGSQGPPRYVRIVVWKK---------LFLVDQRLGEVEVPLGNLNDRVDVDEWVALRGDKGSYWFVNVRFSLRFVMVSASD------PIPCDD 1443
            L RNA FRR  L  RF   V V L  L+ ++    P   E              FA + L+     GS      S    EK        DS + +R     V           G AT    WGA AAFRF LP+EA P   +                + ++GPP    + V+++         +   +  LG+VEVPL NL +   + +W+ L G KG +WF+ VR +L FV+   +D      P+P  D
Sbjct: 1778 LLRNAWFRRHGLKRRFSASVRVDLEALETMAGALSPGAAEAAQAAQRAPPVDDAFAVLRLRHARPKGSQAPPPLS----EKL----RTRDSCIAKRRGKVHV----------GGGAT----WGAAAAFRFALPDEALPPQNSVR--------------LPTRGPPTVAYVCVYRREKHALAALGVPAQETYLGDVEVPLDNLTEDQPLTQWLPLNGGKGQHWFLRVRVTLAFVLCELADAPASVSPMPTPD 1992          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10999.812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G823_ECTSI1.060e-22965.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K928_9PHAE1.130e-20765.64PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3Y602_HETAK9.000e-3334.69Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A836C890_9STRA2.040e-3235.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z5JBW6_FISSO2.660e-2425.80Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5JPQ6_FISSO8.520e-2426.71Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S3V8S0_9STRA4.920e-2126.99Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S3V901_9STRA6.000e-2126.99Hypothetical protein (Fragment) n=2 Tax=Chaetocero... [more]
A0A8J2WZR4_9STRA8.850e-1129.08Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10999contigH-elongata_contig10999:3060..6214 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score140.6
Seed ortholog evalue2e-30
Seed eggNOG ortholog2850.Phatr49814
EggNOG free text desc.RAVE protein 1 C terminal
EggNOG OGs2XA4N@2836,KOG1064@1,KOG1064@2759
Ec32 ortholog descriptionC2 domain
Ec32 orthologEc-06_009880.1
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1524
Cds size1524
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10999.812.1prot_H-elongata_contig10999.812.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10999 3060..6214 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929626.67207-CDS-H-elongata_contig10999:3059..32101622929626.67207-CDS-H-elongata_contig10999:3059..3210Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 3060..3210 -
1691679096.7509124-CDS-H-elongata_contig10999:3059..32101691679096.7509124-CDS-H-elongata_contig10999:3059..3210Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 3060..3210 -
1622929626.7007575-CDS-H-elongata_contig10999:3418..40091622929626.7007575-CDS-H-elongata_contig10999:3418..4009Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 3419..4009 -
1691679096.7604032-CDS-H-elongata_contig10999:3418..40091691679096.7604032-CDS-H-elongata_contig10999:3418..4009Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 3419..4009 -
1622929626.717471-CDS-H-elongata_contig10999:4263..44791622929626.717471-CDS-H-elongata_contig10999:4263..4479Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 4264..4479 -
1691679096.7699215-CDS-H-elongata_contig10999:4263..44791691679096.7699215-CDS-H-elongata_contig10999:4263..4479Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 4264..4479 -
1622929626.732789-CDS-H-elongata_contig10999:4818..50311622929626.732789-CDS-H-elongata_contig10999:4818..5031Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 4819..5031 -
1691679096.789008-CDS-H-elongata_contig10999:4818..50311691679096.789008-CDS-H-elongata_contig10999:4818..5031Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 4819..5031 -
1622929626.752041-CDS-H-elongata_contig10999:5444..55211622929626.752041-CDS-H-elongata_contig10999:5444..5521Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 5445..5521 -
1691679096.8038886-CDS-H-elongata_contig10999:5444..55211691679096.8038886-CDS-H-elongata_contig10999:5444..5521Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 5445..5521 -
1622929626.7670312-CDS-H-elongata_contig10999:5938..62141622929626.7670312-CDS-H-elongata_contig10999:5938..6214Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 5939..6214 -
1691679096.8138485-CDS-H-elongata_contig10999:5938..62141691679096.8138485-CDS-H-elongata_contig10999:5938..6214Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10999 5939..6214 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10999.812.1

>prot_H-elongata_contig10999.812.1 ID=prot_H-elongata_contig10999.812.1|Name=mRNA_H-elongata_contig10999.812.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=508bp
QSPQTWPEEDSEERIAYQMLHGMRRADGSVLPSVTLHAVREGGGGDAHFV
EAFYSSDARSWLLVAGVDPAGPSAGGRLRRWEGLGIAQRVAKAAGTGGQI
HFIGERHKGDALLRFVDRWEVEHCGESGGGALRGGPLGRMSYQPVQVGRS
AASLETLYGKMLHAIGESAALELWTRLAVEDWLVRTVSRAEFPFSHRHQL
ADFSPAGSGELTASRGVAGAVLLTSPAAAAAAAADMPCPLHDGKRHDRDA
FCLSVFEHLCRNALFRRLRLPHRFQTLVTVQLLGLKNLSPNYHPSKTEVF
AAVTLKRGDSSGSSTTLTSSNGHDEKYVHPNHMGDSVLRRRGRNTSVTSV
KTLLPTANGQATQQSRWGAKAAFRFPLPEEASPYVLTYGDRAYELVMGGS
GGGMGSQGPPRYVRIVVWKKLFLVDQRLGEVEVPLGNLNDRVDVDEWVAL
RGDKGSYWFVNVRFSLRFVMVSASDPIPCDDTEYYEGDHSDTPGMTLSHA
LEDVDVM*
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mRNA from alignment at H-elongata_contig10999:3060..6214-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10999.812.1 ID=mRNA_H-elongata_contig10999.812.1|Name=mRNA_H-elongata_contig10999.812.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3155bp|location=Sequence derived from alignment at H-elongata_contig10999:3060..6214- (Himanthalia elongata Himel1 dioecious)
CAATCCCCACAGACATGGCCCGAAGAGGATAGCGAAGAGCGAATAGCATA CCAGATGCTACACGGCATGAGGCGGGCAGACGGCTCTGTCTTGCCGAGCG TGACCCTCCACGCTGTCCGCGAGGGTGGGGGAGGCGACGCGCATTTCGTG GAGGCGTTCTACTCCTCCGACGCCAGAAGCTGGCTGCTCGTAGCAGGGGT TGATCCTGCCGGGCCTTCGGCGGGGGGCAGGCTCAGGCGGTGGGAAGGAT TAGGCATCGCCCAGAGAGTCGCCAAGGTTTGTCTCTGTACGAATGTTTGC CTTGCACTGCTGCTGTCACGTACCAGGATGGGGCAGGAGGATCTATGTTT CATGTTTTGCTTTCTTTGTTTTGTATGTGTTTTATTTTATCCGGAGGGTC GATGTTTCAAGTTTCGCAAAAATCGTTTCATGTCAACCGTTTTCCTAGAG TCAGACGATTTCTAACGCGTATTAATAGTTGTAAAACAACGGCAAGCGGG ACAGCAGGTTGTACGATATTTTACGATACGATACGAAACGATACGATATA CCCAGTACGGCGGGGGATTTACGGCATAGCGATGTATTACCATGTACATG GTATGGTATACATAGTACGGAATAGTATACGATACATGTCAAGTCCTCCA TGCTGACTCCCATGACACCCGCGCGACTCACGCATGGACTCAGGCTGCTG GCACCGGGGGTCAGATCCACTTTATCGGCGAGCGCCACAAGGGCGACGCT CTCCTTCGGTTTGTCGACAGGTCTGTTCATATGTCCGCATGTCCGTGTGT CCGCTGCTTTGCTTCGTGCTGCTACTCCGTACCGAGAGCTGCCCACCTTC GTCCATGAGGTTGTGCTTTTGGAGAGCGGGAACTCCGCCGTAGGCTCATG CCTAAAAATACTCATGCGGTGGACGGGGTAGGCTGCGGAAATCGACGAGT TACCGGGAGGATTTGTTTACGTTGTTTTCTTGGATTTTTTTCTCCGTGCT CTACCGACACTAAAATATGGGCTCATTAGAGGCGGAGAACCGGATCGAGA ATTGATCACTAACCCTTGTCGCACAACAATGGGCGGTGCGTGGTGGATGG GTCGTTCAACGACGTTATAAAGGTAATACTCCGTTCAAAGAACACACCGC TGTCTGTCTGTCCCTCCACTTGCGTCGCCACAGGTGGGAAGTCGAGCACT GCGGGGAATCTGGTGGTGGGGCTCTTCGCGGAGGTCCCCTTGGTCGCATG TCGTATCAGCCCGTCCAGGTCGGGAGGTCTGCGGCGAGCCTGGAGACGCT GTACGGCAAGATGCTGCACGCTATCGGCGAGAGCGCGGCCCTAGAGCTCT GGACGAGGTTGGCCGTGGAGGACTGGTTGGTCAGAACGGTCTCCAGGTGA CGAAACCTCTCTCCCCGGAAAGCAAGCATTTCGGGCCTCGCCGTGCATGC CGCAACGGCCGTATGCATTAGAGGGCCTAGGAGCAGATAAGAGGTTTTGT AGGTTGTTGAGCTTCTGATCCGTAGACGGGCGGGACTTGGGCTCACTTCT GGTTATTTATTTGTCTCTCTCTCCTTCGACTGGGAGTTAGGTGGCGTGAC TGGAGAACTAGGACTTTTCCTGTCGGTTTCTTGGAGCCATTACCATGCAA ACACTCTACCGCGAGCCTTAGTCGCTTCCGCCTATGCCGTGCAGTCACGC TACCCTCGCGCCCCGCCAACCCCGATGCAAAACAGGGCGGAGTTTCCGTT CTCGCATCGGCACCAACTTGCCGACTTTTCGCCCGCCGGCTCCGGCGAGC TCACCGCGTCCAGGGGGGTGGCGGGGGCGGTGCTGCTCACTTCGCCGGCA GCGGCAGCAGCGGCGGCGGCTGATATGCCGTGTCCTCTTCACGATGGCAA GCGCCACGACCGCGATGCGTTCTGCCTTTCTGTCTTCGAGCACCTCTGTC GGTAAGTGTGAAAAACGATCCCGCGCGATCATGGGAAGGATGAGAGTTGG AGCGCCAAGGTTATATTTCCGCGCGTTCTTCAGTTCTACCTTGTGGTTAG AATTTTGGTGGTGACACAACTCGACGCAGCACGGTCGTGGGGCGAATATT TTGTCATCGAATGGCGCGCTCTGTATATCCATAGCCGGTGGTCCTACCTC ACGTCCCGCGTCTCTTCGCTAACACGACACGTTTCTCACGCGGCGCATAC TGCAGGAACGCGCTGTTCCGGCGCCTGCGGCTTCCCCACCGCTTCCAAAC TCTAGTGACGGTCCAGCTCCTGGGGCTGAAGAACCTCAGCCCCAACTACC ACCCTTCCAAGACAGAAGTTTTCGCTGCGGTGACTCTCAAACGTGGAGAC TCTTCTGGATCCTCGACCACCTTAACCTCCTCGAATGGGCACGATGAAAA ATATGTACATCCTAACCACATGGGCGACTCGGTATTAAGGCGTAGAGGAC GAAACACATCGGTTACGTCCGTCAAGACCCTGCTGCCGACGGCGAACGGG CAGGCCACCCAGCAGTCGCGCTGGGGGGCAAAAGCGGCCTTCCGTTTCCC GCTTCCCGAGGAAGCCTCGCCGTACGTCCTTACCTACGGCGACAGGGCGT ACGAGCTCGTGATGGGCGGAAGCGGAGGGGGTATGGGAAGCCAGGGACCC CCCCGGTACGTGCGCATAGTGGTATGGAAGAAGCTCTTCCTCGTGGACCA GCGGCTGGGAGAAGTTGAGGTGCCCCTCGGCAACCTCAACGACCGCGTGG ATGTGGACGAGTGGGTGGCGCTTCGCGGCGACAAGGGTTCTTACTGGTGA GTTAGTTATGTTTTCATTTGCGTTTCAGCAGACGTGTTTCGCTACGCCTC AACACCGTGATGCGATATGTTCGCACTGGTATACTTCGTAAGATGTTGTG AAAACCTCTGAGGACCAATTTGACAGGATTTAAAGAAATTGAAATATCTC GCCGCACCTTTCGCAACCCGCCCCTTCTCTCTCTTCCCGCAATGCTGTGC ACAGGTTCGTCAATGTTCGCTTCAGCCTGAGGTTTGTGATGGTGAGCGCG TCGGATCCGATACCGTGTGACGACACCGAGTACTACGAGGGAGACCACTC GGACACCCCCGGGATGACGCTGTCGCACGCGCTAGAAGACGTTGACGTCA TGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig10999:3060..6214-

>mRNA_H-elongata_contig10999.812.1 ID=mRNA_H-elongata_contig10999.812.1|Name=mRNA_H-elongata_contig10999.812.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3048bp|location=Sequence derived from alignment at H-elongata_contig10999:3060..6214- (Himanthalia elongata Himel1 dioecious)
CAATCCCCACAGACATGGCCCGAAGAGGATAGCGAAGAGCGAATAGCATA
CCAGATGCTACACGGCATGAGGCGGGCAGACGGCTCTGTCTTGCCGAGCG
TGACCCTCCACGCTGTCCGCGAGGGTGGGGGAGGCGACGCGCATTTCGTG
GAGGCGTTCTACTCCTCCGACGCCAGAAGCTGGCTGCTCGTAGCAGGGGT
TGATCCTGCCGGGCCTTCGGCGGGGGGCAGGCTCAGGCGGTGGGAAGGAT
TAGGCATCGCCCAGAGAGTCGCCAAGCAATCCCCACAGACATGGCCCGAA
GAGGATAGCGAAGAGCGAATAGCATACCAGATGCTACACGGCATGAGGCG
GGCAGACGGCTCTGTCTTGCCGAGCGTGACCCTCCACGCTGTCCGCGAGG
GTGGGGGAGGCGACGCGCATTTCGTGGAGGCGTTCTACTCCTCCGACGCC
AGAAGCTGGCTGCTCGTAGCAGGGGTTGATCCTGCCGGGCCTTCGGCGGG
GGGCAGGCTCAGGCGGTGGGAAGGATTAGGCATCGCCCAGAGAGTCGCCA
AGGCTGCTGGCACCGGGGGTCAGATCCACTTTATCGGCGAGCGCCACAAG
GGCGACGCTCTCCTTCGGTTTGTCGACAGGCTGCTGGCACCGGGGGTCAG
ATCCACTTTATCGGCGAGCGCCACAAGGGCGACGCTCTCCTTCGGTTTGT
CGACAGGTGGGAAGTCGAGCACTGCGGGGAATCTGGTGGTGGGGCTCTTC
GCGGAGGTCCCCTTGGTCGCATGTCGTATCAGCCCGTCCAGGTCGGGAGG
TCTGCGGCGAGCCTGGAGACGCTGTACGGCAAGATGCTGCACGCTATCGG
CGAGAGCGCGGCCCTAGAGCTCTGGACGAGGTTGGCCGTGGAGGACTGGT
TGGTCAGAACGGTCTCCAGGTGGGAAGTCGAGCACTGCGGGGAATCTGGT
GGTGGGGCTCTTCGCGGAGGTCCCCTTGGTCGCATGTCGTATCAGCCCGT
CCAGGTCGGGAGGTCTGCGGCGAGCCTGGAGACGCTGTACGGCAAGATGC
TGCACGCTATCGGCGAGAGCGCGGCCCTAGAGCTCTGGACGAGGTTGGCC
GTGGAGGACTGGTTGGTCAGAACGGTCTCCAGGGCGGAGTTTCCGTTCTC
GCATCGGCACCAACTTGCCGACTTTTCGCCCGCCGGCTCCGGCGAGCTCA
CCGCGTCCAGGGGGGTGGCGGGGGCGGTGCTGCTCACTTCGCCGGCAGCG
GCAGCAGCGGCGGCGGCTGATATGCCGTGTCCTCTTCACGATGGCAAGCG
CCACGACCGCGATGCGTTCTGCCTTTCTGTCTTCGAGCACCTCTGTCGGG
CGGAGTTTCCGTTCTCGCATCGGCACCAACTTGCCGACTTTTCGCCCGCC
GGCTCCGGCGAGCTCACCGCGTCCAGGGGGGTGGCGGGGGCGGTGCTGCT
CACTTCGCCGGCAGCGGCAGCAGCGGCGGCGGCTGATATGCCGTGTCCTC
TTCACGATGGCAAGCGCCACGACCGCGATGCGTTCTGCCTTTCTGTCTTC
GAGCACCTCTGTCGGAACGCGCTGTTCCGGCGCCTGCGGCTTCCCCACCG
CTTCCAAACTCTAGTGACGGTCCAGCTCCTGGGGCTGAAGAACCTCAGCC
CCAACTACCACCCTTCCAAGACAGAAGTTTTCGCTGCGGTGACTCTCAAA
CGTGGAGACTCTTCTGGATCCTCGACCACCTTAACCTCCTCGAATGGGCA
CGATGAAAAATATGTACATCCTAACCACATGGGCGACTCGGTATTAAGGC
GTAGAGGACGAAACACATCGGTTACGTCCGTCAAGACCCTGCTGCCGACG
GCGAACGGGCAGGCCACCCAGCAGTCGCGCTGGGGGGCAAAAGCGGCCTT
CCGTTTCCCGCTTCCCGAGGAAGCCTCGCCGTACGTCCTTACCTACGGCG
ACAGGGCGTACGAGCTCGTGATGGGCGGAAGCGGAGGGGGTATGGGAAGC
CAGGGACCCCCCCGGTACGTGCGCATAGTGGTATGGAAGAAGCTCTTCCT
CGTGGACCAGCGGCTGGGAGAAGTTGAGGTGCCCCTCGGCAACCTCAACG
ACCGCGTGGATGTGGACGAGTGGGTGGCGCTTCGCGGCGACAAGGGTTCT
TACTGGAACGCGCTGTTCCGGCGCCTGCGGCTTCCCCACCGCTTCCAAAC
TCTAGTGACGGTCCAGCTCCTGGGGCTGAAGAACCTCAGCCCCAACTACC
ACCCTTCCAAGACAGAAGTTTTCGCTGCGGTGACTCTCAAACGTGGAGAC
TCTTCTGGATCCTCGACCACCTTAACCTCCTCGAATGGGCACGATGAAAA
ATATGTACATCCTAACCACATGGGCGACTCGGTATTAAGGCGTAGAGGAC
GAAACACATCGGTTACGTCCGTCAAGACCCTGCTGCCGACGGCGAACGGG
CAGGCCACCCAGCAGTCGCGCTGGGGGGCAAAAGCGGCCTTCCGTTTCCC
GCTTCCCGAGGAAGCCTCGCCGTACGTCCTTACCTACGGCGACAGGGCGT
ACGAGCTCGTGATGGGCGGAAGCGGAGGGGGTATGGGAAGCCAGGGACCC
CCCCGGTACGTGCGCATAGTGGTATGGAAGAAGCTCTTCCTCGTGGACCA
GCGGCTGGGAGAAGTTGAGGTGCCCCTCGGCAACCTCAACGACCGCGTGG
ATGTGGACGAGTGGGTGGCGCTTCGCGGCGACAAGGGTTCTTACTGGTTC
GTCAATGTTCGCTTCAGCCTGAGGTTTGTGATGGTGAGCGCGTCGGATCC
GATACCGTGTGACGACACCGAGTACTACGAGGGAGACCACTCGGACACCC
CCGGGATGACGCTGTCGCACGCGCTAGAAGACGTTGACGTCATGTAAGTT
CGTCAATGTTCGCTTCAGCCTGAGGTTTGTGATGGTGAGCGCGTCGGATC
CGATACCGTGTGACGACACCGAGTACTACGAGGGAGACCACTCGGACACC
CCCGGGATGACGCTGTCGCACGCGCTAGAAGACGTTGACGTCATGTAA
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