mRNA_H-elongata_contig109964.808.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 251 bits (641), Expect = 1.910e-75 Identity = 115/155 (74.19%), Postives = 132/155 (85.16%), Query Frame = 1
Query: 1 QERTFSLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASVYQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTVHMDGGVEVHIRPEAYLDALGKDNAYAPR 465
+ERTFSLCFG NGGTMV+GGYD RLNKPG EM YT TK+SGWFTV+V DIT+N VSI DA+++Q+GKGIIVDSGTTDTYLPKSVAKGFS AWE TGS Y C DNHFCM +T AE+E LP +T+HMDGG+EV++RP Y+DALGKDNAYAPR
Sbjct: 282 KERTFSLCFGKNGGTMVLGGYDNRLNKPGHEMVYTPSTKSSGWFTVKVTDITVNQVSIAKDAAIFQKGKGIIVDSGTTDTYLPKSVAKGFSAAWERATGSPYANCKDNHFCMILTSAELEALPTITIHMDGGLEVNVRPSGYMDALGKDNAYAPR 436
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 209 bits (532), Expect = 2.760e-62 Identity = 103/156 (66.03%), Postives = 121/156 (77.56%), Query Frame = 1
Query: 1 QERTFSLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASVYQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTVHMDGGVEVHIRPEAYLDALGKD-NAYAPR 465
ER FSLCF GGTMVIGGYD LNKPG+EM YT T + TV+V D+TLNGVSI TDASV+Q+G GI V SGTTD YLP++VA+GFS AWEA TGS Y TC N FCMT T A++E LP++T+HMDGGVEV+++PEAY+DA D NAYAPR
Sbjct: 264 SERKFSLCFSETGGTMVIGGYDPLLNKPGSEMQYTPSTGETSAPTVKVTDVTLNGVSITTDASVFQKGTGIKVVSGTTDMYLPRAVAEGFSAAWEAATGSPYATCKSNEFCMTRTTADLETLPVLTIHMDGGVEVNVQPEAYMDASSDDENAYAPR 419
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A6H5LN99_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN99_9PHAE) HSP 1 Score: 149 bits (376), Expect = 9.640e-39 Identity = 80/162 (49.38%), Postives = 98/162 (60.49%), Query Frame = 1
Query: 1 QERTFSLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASV--YQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTVHMDGGVEVHIRPEAYLD---ALGKDNA--YAPR 465
Q+R FS+CF NGG +V+GGYD L PGA YT G+F VEVL + L G SI T ++ + G G IVDSGTTD YLP VA FS+AWEA TG Y CP N FC+ +TP E ELP+V+ + GVEV + P YL+ GK + YAPR
Sbjct: 320 QDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAQFARGFFAVEVLGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGNSFCLKLTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKETAGKPHKTYYAPR 481
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 131 bits (330), Expect = 3.990e-33 Identity = 75/157 (47.77%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 1 QERTFSLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASVYQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTVHMDGGVEVHIRPEAYLD-ALGKDNA-YAPR 465
QE+ FSLCF GG MV+GG + L A M YT GWFTV++ DI + G SI D + Y RGKG+IVDSGTTDTYLP + A GF W+A TG +Y P M ++ A+ LP T GGV V ++PEAY+D A D A Y PR
Sbjct: 169 QEK-FSLCFDYGGGVMVLGGVEPLLRT--APMQYTPNLHDEGWFTVDLQDILIGGESINVDPAQYNRGKGVIVDSGTTDTYLPSACADGFRAQWQALTGMAYDNKP-----MKLSKAQFAALPTFTFVFAGGVRVDVKPEAYMDVAADHDGAGYTPR 317
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 127 bits (318), Expect = 5.910e-31 Identity = 67/140 (47.86%), Postives = 84/140 (60.00%), Query Frame = 1
Query: 16 SLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASVYQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTVHMDGGVEVHIRPEAYLDA 435
SLCFG GG MV+GG D L+ A M +T K +GWFTV+++D+ + G SIG A+VY RGKG IVDSGTTDTYLP++ A F AW A TG Y + AE+ LP +T GG V + PEAY+ A
Sbjct: 169 SLCFGTGGGAMVLGGSDPLLHT--APMQFTPSLKRTGWFTVDLIDVQIGGASIGAPAAVYARGKGAIVDSGTTDTYLPEACAARFRAAWRAATGRDYSESAPQR----LARAELAALPALTFVFRGGARVDVLPEAYMVA 302
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A8J2SW55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW55_9STRA) HSP 1 Score: 124 bits (311), Expect = 9.530e-31 Identity = 63/146 (43.15%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 4 ERTFSLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASVYQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTVHMDGGVEVHIRPEAYLDALG 441
+F++CF GGTM +GG D R++K M + L K SGWFTV++ D+ LNG SIG S + GKG IVDSGTTDTYLP+ A+ F +AW A G S K + T A+ + P +T GGV+V + +AY++ G
Sbjct: 253 HNSFAMCFMQGGGTMALGGVDTRIHKE--PMQFVPLAKNSGWFTVQLKDVLLNGKSIGVPESTWNTGKGTIVDSGTTDTYLPRRAAEQFKRAWHAAMGPSPKYANSK---LAYTAAQAAKFPTITYVFAGGVKVDVEGKAYMEKAG 393
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.280e-29 Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 1
Query: 1 QERTFSLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASVYQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTVHMDGG----VEVHIRPEAYLDALGKDNAYAPR 465
+ +TF+LCF GG M IGG D+ +++ M + L K+SGWFTV++ + + VS+ + Y GKG+IVDSGTTDTYLPK A F KAW + +G Y + MT+ +P +T G VEVH+RP AY++ G D Y PR
Sbjct: 242 EAKTFALCFMKGGGMMTIGGADSAIHQE--PMKFVPLAKSSGWFTVKLKGLRVGDVSLSVSGNSYNSGKGVIVDSGTTDTYLPKKAAGAFKKAWRSLSGREY-----GNGKMTLDAENFARIPTITFVFQGAHGEDVEVHMRPNAYMEQQGSDK-YVPR 392
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A7S3YC94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC94_HETAK) HSP 1 Score: 121 bits (303), Expect = 2.110e-29 Identity = 64/154 (41.56%), Postives = 87/154 (56.49%), Query Frame = 1
Query: 4 ERTFSLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASVYQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTVHMDGGVEVHIRPEAYLDALGKDNAYAPR 465
F++CF GG M +GG D RL+ + M + LT+ +GWFTV + +I + G + AS Y GKG IVDSGTTDTYL + VA F W A +G +Y T++ A++ LP VT GVEV +RPE+Y++ G N Y PR
Sbjct: 221 HNNFAMCFNEEGGVMSLGGVDTRLHD--SPMQFVPLTQNTGWFTVSLKEIRVGGEKLNVGASNYNGGKGTIVDSGTTDTYLNRHVANEFKAKWHAASGMTYSNA-----AKTLSEAQLAALPSVTYVFGNGVEVVVRPESYMEKTGT-NKYTPR 366
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A4D9CR18_9STRA (Peptidase A1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR18_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.010e-27 Identity = 63/147 (42.86%), Postives = 90/147 (61.22%), Query Frame = 1
Query: 1 QERTFSLCFGVNGGTMVIGGYDARLN-KPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASVYQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTVHMDGGVEVHIRPEAYLDAL 438
FSLCF +GG+M IGGY+ + KP + + LTK +GW+TV + DI + SIG D +V+ G+G IVDSGTTDTYLP+SVA F + ++ G +Y + M ++P+EME LP + +D GVEV + E YL+ +
Sbjct: 264 DATVFSLCFTEDGGSMRIGGYETEHHTKP---LQWVPLTKPTGWYTVTLKDIKIGNTSIGVDPNVFNAGQGTIVDSGTTDTYLPRSVASAFQRVFQDVAGVAYSSRS-----MRLSPSEMEALPPLVFVLDNGVEVPMPRENYLECM 402
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Match: A0A7S2B1E9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1E9_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.240e-24 Identity = 60/159 (37.74%), Postives = 87/159 (54.72%), Query Frame = 1
Query: 1 QERTFSLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDITLNGVSIGTDASVYQRGKGIIVDSGTTDTYLPKSVAKGFSKAWEATTGSSYKTCPDNHFCMTITPAEMEELPIVTV---HMDGG-VEVHIRPEAYLDALGKDNAYAPR 465
+ FSLCF GG M IGG D + + M TK+SGWFTV + +++ G + SVY GKG+IVDSGTTDTYLP+ +A F KAW+ G Y MT + + +LP+++ ++G +E+ + P+AY++ K Y PR
Sbjct: 101 SNQVFSLCFMKGGGIMTIGGADPAIQS--SPMVLVPTTKSSGWFTVHLDYVSVGGTKLDVQDSVYNSGKGVIVDSGTTDTYLPRKMAGQFKKAWKDIVGKEYGNTK-----MTFSDEQFAKLPVISFAFKDVNGKKIEIGMHPDAYMEKSAKQ--YVPR 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109964.808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109964.808.1 >prot_H-elongata_contig109964.808.1 ID=prot_H-elongata_contig109964.808.1|Name=mRNA_H-elongata_contig109964.808.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp QERTFSLCFGVNGGTMVIGGYDARLNKPGAEMAYTHLTKTSGWFTVEVLDback to top mRNA from alignment at H-elongata_contig109964:169..1903+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109964.808.1 ID=mRNA_H-elongata_contig109964.808.1|Name=mRNA_H-elongata_contig109964.808.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1735bp|location=Sequence derived from alignment at H-elongata_contig109964:169..1903+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109964:169..1903+ >mRNA_H-elongata_contig109964.808.1 ID=mRNA_H-elongata_contig109964.808.1|Name=mRNA_H-elongata_contig109964.808.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig109964:169..1903+ (Himanthalia elongata Himel1 dioecious)back to top |