prot_H-elongata_contig109892.800.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: D7FK17_ECTSI (Novel Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK17_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 7.390e-15 Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 0
Query: 1 MSGDLIGSRISLISRKDIRWEGILVQVDRENASVTLQS 38
MSGDL+GSRISLISRKDIRWEGILVQVDRENASVTLQ+
Sbjct: 1 MSGDLVGSRISLISRKDIRWEGILVQVDRENASVTLQN 38
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: A0A6H5KDD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD7_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 1.130e-14 Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 0
Query: 1 MSGDLIGSRISLISRKDIRWEGILVQVDRENASVTLQS 38
MSGDL+GSRISLISRKDIRWEGILVQVDRENASVTLQ+
Sbjct: 1 MSGDLVGSRISLISRKDIRWEGILVQVDRENASVTLQN 38
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: A0A836C876_9STRA (Scd6-like Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C876_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 3.310e-7 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 2 SGDLIGSRISLISRKDIRWEGILVQVDRENASVTLQ 37
S LIGSRISLIS+KDIR+EGIL +D EN+SVTLQ
Sbjct: 3 SQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQ 38
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: W7TTD5_9STRA (Ribonucleoprotein LSM n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTD5_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 1.820e-6 Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0
Query: 3 GDLIGSRISLISRKDIRWEGILVQVDRENASVTLQS 38
G LIGS ISL+S KDIR+EG+L +D+E +SVTLQS
Sbjct: 5 GKLIGSVISLVSNKDIRYEGVLYAIDQEKSSVTLQS 40
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: A0A4D9D9H3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H3_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 2.230e-6 Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0
Query: 3 GDLIGSRISLISRKDIRWEGILVQVDRENASVTLQS 38
G LIGS ISL+S KDIR+EG+L +D+E +SVTLQS
Sbjct: 5 GKLIGSVISLVSNKDIRYEGVLYAIDQEKSSVTLQS 40
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: A0A0V0XHR1_TRIPS (Protein LSM14-like protein A n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V0XHR1_TRIPS) HSP 1 Score: 46.2 bits (108), Expect = 1.190e-5 Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 0
Query: 1 MSGDLIGSRISLISRKDIRWEGILVQVDRENASVTLQSG 39
M+ L+GS+ISLIS+ +IR+EGIL VD E +S+ L G
Sbjct: 1 MNAPLLGSKISLISKSEIRYEGILYTVDPEQSSIALAKG 39
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: A0A6H5L3S6_9PHAE (LSM14 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3S6_9PHAE) HSP 1 Score: 45.4 bits (106), Expect = 3.560e-5 Identity = 20/35 (57.14%), Postives = 29/35 (82.86%), Query Frame = 0
Query: 5 LIGSRISLISRKDIRWEGILVQVDRENASVTLQSG 39
L+GSRISLIS+K+IR+EG L ++ +AS+ LQ+G
Sbjct: 10 LVGSRISLISKKNIRYEGTLYNINTSDASLALQNG 44
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: L5JQY9_PTEAL (Protein LSM14 like protein A n=1 Tax=Pteropus alecto TaxID=9402 RepID=L5JQY9_PTEAL) HSP 1 Score: 47.0 bits (110), Expect = 4.120e-5 Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 6 IGSRISLISRKDIRWEGILVQVDRENASVTLQSGEP 41
IGS+ISLIS+ +IR+EGIL +D EN++V L G P
Sbjct: 8 IGSKISLISKAEIRYEGILYTIDTENSTVALAKGTP 43
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: A0A8J6DXJ6_GALPY (Protein LSM14 A n=1 Tax=Galemys pyrenaicus TaxID=202257 RepID=A0A8J6DXJ6_GALPY) HSP 1 Score: 47.0 bits (110), Expect = 4.930e-5 Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 6 IGSRISLISRKDIRWEGILVQVDRENASVTLQSGEP 41
IGS+ISLIS+ +IR+EGIL +D EN++V L G P
Sbjct: 8 IGSKISLISKAEIRYEGILYTIDTENSTVALAKGTP 43
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Match: A0A1Z5JPN3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPN3_FISSO) HSP 1 Score: 47.4 bits (111), Expect = 6.930e-5 Identity = 19/38 (50.00%), Postives = 31/38 (81.58%), Query Frame = 0
Query: 1 MSGDLIGSRISLISRKDIRWEGILVQVDRENASVTLQS 38
M+ L+G RISL+S+K+IR+EG+L ++ +NA+V LQ+
Sbjct: 1 MTNPLLGKRISLVSKKNIRYEGVLYSINEQNATVALQN 38 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109892.800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 10
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig109892.800.1 ID=prot_H-elongata_contig109892.800.1|Name=mRNA_H-elongata_contig109892.800.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bpback to top |