prot_H-elongata_contig10985.795.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10985.795.1
Unique Nameprot_H-elongata_contig10985.795.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length183
Homology
BLAST of mRNA_H-elongata_contig10985.795.1 vs. uniprot
Match: D8LG94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG94_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 2.390e-25
Identity = 90/166 (54.22%), Postives = 103/166 (62.05%), Query Frame = 0
Query:   22 KKGGRRYSSHIAVGDKVDARFGGGAESFPAVVTKTFQGGLLNLLYDDGERESRVPLSLVRMRGRG-----DSSDGTGSDTELDPNVGPNGAVRRFTGAASSAHPGARTSGGDRRDGWKVMMQKPKKNSKERXXXXXXXXXXXXXXXXXXXXXXXEVAAREALRKKL 182
            ++  RR S  I VGD+V+ RF  GAE FPAVVTK   GG +NLLYDDGERE+RVPL+LVR RG       DS  G  SD                 GA +   P A+     + DGW+VM+QKPKK   ER      XXXXXXXXXXXXXXXXXE+AAREALRKKL
Sbjct:  153 RESARRNSGRIGVGDRVEGRFEAGAEWFPAVVTKLLHGGFVNLLYDDGERETRVPLALVRHRGATAAMTMDSDSGDSSDE----------------GAEAPRLPTAKQRS-KQADGWEVMVQKPKKTRVERVESRIEXXXXXXXXXXXXXXXXXELAAREALRKKL 301          
BLAST of mRNA_H-elongata_contig10985.795.1 vs. uniprot
Match: A0A1V9YSA0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YSA0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.460e-6
Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 0
Query:   22 KKGGRRYSSHIAVGDKVDARFGGGAESFPAVVTKTFQGGLLNLLYDDGERESRVPLSLVRMRGRGDSSDGTGSD 95
            K G  + ++ + VG KV+AR+ G ++ +P  + K    G  ++ YDDGE+E R+ + L+R+ G    +DG+G+D
Sbjct:  319 KMGSPKKNTALKVGTKVEARYKGKSKYYPGKIAKAHSDGSYDIDYDDGEKEKRIEMDLIRVLGG--ENDGSGND 390          
BLAST of mRNA_H-elongata_contig10985.795.1 vs. uniprot
Match: D7FUN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUN9_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 7.010e-5
Identity = 31/74 (41.89%), Postives = 39/74 (52.70%), Query Frame = 0
Query:   12 MAVEGNRLREKKGGRRYSSHIAVGDKVDARFGGGAESFPAVVTKTFQGGLLNLLYDDGERESRVPLSLVRMRGR 85
            +A   N     +GG   S+  AVGDKV+ARFGG +  F A V    + G   LLYDDG+ E  V   L+R   R
Sbjct: 1160 LATSTNTSDTARGGGGRSNDFAVGDKVEARFGGRSRWFRAAVEGKNRDGTYCLLYDDGDVERSVDKKLIRSLAR 1233          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10985.795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LG94_ECTSI2.390e-2554.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9YSA0_9STRA6.460e-635.14Uncharacterized protein (Fragment) n=1 Tax=Achlya ... [more]
D7FUN9_ECTSI7.010e-541.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..172
NoneNo IPR availableGENE3D2.30.30.140coord: 22..84
e-value: 4.2E-8
score: 34.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10985contigH-elongata_contig10985:5540..7141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10985.795.1mRNA_H-elongata_contig10985.795.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10985 4761..7751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10985.795.1 ID=prot_H-elongata_contig10985.795.1|Name=mRNA_H-elongata_contig10985.795.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp
MLRAAKDPMPFMAVEGNRLREKKGGRRYSSHIAVGDKVDARFGGGAESFP
AVVTKTFQGGLLNLLYDDGERESRVPLSLVRMRGRGDSSDGTGSDTELDP
NVGPNGAVRRFTGAASSAHPGARTSGGDRRDGWKVMMQKPKKNSKERAEA
RVEASSNAKNRLKRQKKREKEVAAREALRKKL*
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