mRNA_H-elongata_contig109844.794.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: A0A6H5JFJ1_9PHAE (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ1_9PHAE) HSP 1 Score: 280 bits (715), Expect = 4.110e-89 Identity = 154/198 (77.78%), Postives = 168/198 (84.85%), Query Frame = 1
Query: 19 PLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVG--------ATGFPSEG--------QLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYLNNKKDKSTTVGV 564
PLV VIMGSDSDLPTM+A+ADIL+ FGVPYELTIVSAHRTPARMTA+ATGAASRG+RV+IAGAGGA HLPGM+AAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVR++ ATG P EG LL AM+ YMA GKEVEEKA +ME++GWKAYL+ K DKSTTVGV
Sbjct: 339 PLVSVIMGSDSDLPTMKASADILETFGVPYELTIVSAHRTPARMTAFATGAASRGIRVVIAGAGGAAHLPGMVAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRMLASGGGEASPATGPPGEGGGGGVEGSPLLRAMDEYMARSGKEVEEKALKMEEQGWKAYLSAKIDKSTTVGV 536
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: A0A835YZI5_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI5_9STRA) HSP 1 Score: 242 bits (618), Expect = 1.680e-74 Identity = 132/181 (72.93%), Postives = 149/181 (82.32%), Query Frame = 1
Query: 22 LVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVGATGFPSEGQLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYLNNKKDKSTTVGV 564
LVG+IMGSDSDLPTM+AAAD L+ FGVPYELTIVSAHRTPAR+ Y+ AA+RGLRVIIAGAGGA HLPGM AAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATV IGNA NAGLLAVR++G ++ +LL M +M + +EV KA ME GWKAYL K ++STTVG+
Sbjct: 370 LVGIIMGSDSDLPTMKAAADALERFGVPYELTIVSAHRTPARLVTYSQTAAARGLRVIIAGAGGAAHLPGMCAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVAIGNAMNAGLLAVRMLGM----ADAKLLSQMADFMGEQEQEVLAKAEAMEASGWKAYLAAKSNQSTTVGI 546
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: A0A8J2SB06_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SB06_9STRA) HSP 1 Score: 221 bits (564), Expect = 6.590e-71 Identity = 124/181 (68.51%), Postives = 140/181 (77.35%), Query Frame = 1
Query: 19 PLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVGATGFPSEGQLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYLNNKK-DKSTTV 558
PLVGVIMGSDSDLP M+AA ++L++F + YE TIVSAHRTP R+ YA A RGL+VI+AGAGGA HLPGM+AAMTPLPV+GVPVKTS LSGVDSLHSIVQMPRGVPVATV IGNATNAGLLA RI+ S L A+EAY A + EV KA +E GWKAYL K+ KSTTV
Sbjct: 3 PLVGVIMGSDSDLPVMKAACEMLEKFKIEYECTIVSAHRTPDRLVEYARSARRRGLKVIVAGAGGAAHLPGMVAAMTPLPVVGVPVKTSALSGVDSLHSIVQMPRGVPVATVAIGNATNAGLLAARILST----SNDALADALEAYAASQRDEVLGKAEVLEGSGWKAYLERKEAPKSTTV 179
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: A0A7S2TYW5_9EUKA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYW5_9EUKA) HSP 1 Score: 222 bits (566), Expect = 3.260e-70 Identity = 119/178 (66.85%), Postives = 145/178 (81.46%), Query Frame = 1
Query: 19 PLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVGATGFPSEGQLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYLNNKKDKST 552
PLVG+IMGSDSDLPTM+AAAD+L+ F VPYEL+IVSAHRTP R+ +YA A RGL+VIIAGAGGA HLPGM+AA+TPLPVIGVPVKTSTLSGVDSL+SIVQMPRGVPVATV IGN+TNAGLLAVR++G + LL M+AY A + V K ++++Q+GW+ YL+ K++
Sbjct: 74 PLVGIIMGSDSDLPTMKAAADMLEAFDVPYELSIVSAHRTPRRLFSYAQSAMGRGLKVIIAGAGGAAHLPGMVAALTPLPVIGVPVKTSTLSGVDSLYSIVQMPRGVPVATVAIGNSTNAGLLAVRMLGV----QDSGLLVKMKAYQAKSEEGVLTKVSKVDQQGWRQYLDKMPTKNS 247
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: A0A662WYX4_9STRA (Phosphoribosylaminoimidazole carboxylase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYX4_9STRA) HSP 1 Score: 223 bits (569), Expect = 7.180e-69 Identity = 118/172 (68.60%), Postives = 141/172 (81.98%), Query Frame = 1
Query: 19 PLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVGATGFPSEGQLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYLNN 534
PLVG++MGSDSDLPTM AAAD+L++FGVPYELTIVSAHRTP RM YA A +RGL+V+IAGAGGA HLPGM+AA+TPLPV+GVPVKTSTL+G DSL SIVQMPRGVPVATV IGN+TNAGLLAVRI+GA + L+ AM ++ + +EV+ K +M GWK YL+N
Sbjct: 223 PLVGIVMGSDSDLPTMAAAADMLEKFGVPYELTIVSAHRTPTRMYEYAQSAVTRGLKVLIAGAGGAAHLPGMLAALTPLPVVGVPVKTSTLNGEDSLLSIVQMPRGVPVATVAIGNSTNAGLLAVRILGAR----DEALVDAMATFLDTQKREVDAKIEKMASSGWKEYLHN 390
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: A0A3M6VH41_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VH41_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.080e-68 Identity = 123/174 (70.69%), Postives = 143/174 (82.18%), Query Frame = 1
Query: 19 PLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVGATGFPSEGQLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYLNNKK 540
PLVG++MGSDSDLPTM AAAD+L++FGVPYELTIVSAHRTPARM YA AA+RGL+VIIAGAGGA HLPGM+AA+TPLPV+GVPVKTSTLSG DSL SIVQMPRGVPVATV IGN+TNAGLLAVRI+ A + L+ AM A++ + +EV++K M GWK YL N K
Sbjct: 424 PLVGIVMGSDSDLPTMAAAADMLEKFGVPYELTIVSAHRTPARMYDYAQSAATRGLKVIIAGAGGAAHLPGMVAALTPLPVVGVPVKTSTLSGEDSLLSIVQMPRGVPVATVAIGNSTNAGLLAVRILSA----GDSSLIEAMAAFLDTQRREVDDKIETMATGGWKEYLQNMK 593
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: F0XY22_AURAN (Phosphoribosylaminoimidazole carboxylase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY22_AURAN) HSP 1 Score: 213 bits (543), Expect = 7.890e-68 Identity = 115/171 (67.25%), Postives = 134/171 (78.36%), Query Frame = 1
Query: 16 PPLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVGATGFPSEGQLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYL 528
PPLVGVIMGSDSDLP M+A ++LD+FGVPYE TIVSAHRTP R+ YA+GA +RGLRV++AGAGGA HLPGM+AAMT LPV+GVPVKTS LSGVDSL+SIVQMPRGVPVATV IGNATNAG+LA RI+ + P L ++AY + EV KA +E G AYL
Sbjct: 3 PPLVGVIMGSDSDLPVMKACCEMLDKFGVPYECTIVSAHRTPQRLCEYASGAKARGLRVVVAGAGGAAHLPGMVAAMTTLPVVGVPVKTSALSGVDSLYSIVQMPRGVPVATVAIGNATNAGVLAARILASA--PGMDALAARLQAYADAQRDEVLAKAATLEGAGHAAYL 171
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: A0A3R7G0H8_9STRA (Phosphoribosylaminoimidazole carboxylase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G0H8_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.050e-67 Identity = 123/175 (70.29%), Postives = 143/175 (81.71%), Query Frame = 1
Query: 19 PLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVGATGFPSEGQLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYLNNKKD 543
PL+G++MGSDSDLPTM AAAD+L++FGVPYELTIVSAHRTPARM YA AA RGL+ IIAGAGGA HLPGMIAA+TPLPVIGVPVKTSTL+G DSL SIVQMPRGVPVATV IGN+TNAGLLAVRI+GA + L+ AM ++ + +EV+EK M +GWK YL N K+
Sbjct: 642 PLIGIVMGSDSDLPTMAAAADMLEKFGVPYELTIVSAHRTPARMYEYAQNAAKRGLKAIIAGAGGAAHLPGMIAALTPLPVIGVPVKTSTLNGEDSLLSIVQMPRGVPVATVAIGNSTNAGLLAVRILGA----GDDSLIDAMATFLDTQKREVDEKIETMASKGWKEYLQNMKN 812
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: H3G5G0_PHYRM (Phosphoribosylaminoimidazole carboxylase n=22 Tax=Phytophthora TaxID=4783 RepID=H3G5G0_PHYRM) HSP 1 Score: 224 bits (571), Expect = 3.210e-67 Identity = 121/174 (69.54%), Postives = 140/174 (80.46%), Query Frame = 1
Query: 19 PLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVGATGFPSEGQLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYLNNKK 540
PLVG++MGSDSDLPTM AAAD+L++FGVPYELTIVSAHRTP RM YA A +RGL+VIIAGAGGA HLPGMIAA+T LPVIGVPVKTSTL+G DSL SIVQMPRGVPVATV IGN+TNAGLLAVRI+GA + L+ AM ++ + +EV++K M GWK YL N K
Sbjct: 408 PLVGIVMGSDSDLPTMAAAADMLEKFGVPYELTIVSAHRTPGRMYEYAQSAVTRGLKVIIAGAGGAAHLPGMIAALTALPVIGVPVKTSTLNGEDSLLSIVQMPRGVPVATVAIGNSTNAGLLAVRILGA----GDSSLIDAMATFLDTQKREVDDKIKTMAASGWKEYLQNMK 577
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Match: A0A7S1RCU3_ALECA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RCU3_ALECA) HSP 1 Score: 218 bits (555), Expect = 4.360e-67 Identity = 121/182 (66.48%), Postives = 136/182 (74.73%), Query Frame = 1
Query: 13 PPPLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMTAYATGAASRGLRVIIAGAGGAGHLPGMIAAMTPLPVIGVPVKTSTLSGVDSLHSIVQMPRGVPVATVGIGNATNAGLLAVRIVGATGFPSEGQLLGAMEAYMAGKGKEVEEKATRMEQEGWKAYLNNKKDKSTTV 558
P PLVGVIMGSDSDLP M+ D L EFGVPYE T+VSAHRTP RM YA AA RGLRVI+AGAGGA HLPGM+AA+T LPVIGVPVKTS LSGVDSL+SIVQMP+GVPVATV IGNA NAGLLAVR++ G + L M + EVEEKA ++E+ G +AYL N KS TV
Sbjct: 184 PAPLVGVIMGSDSDLPCMKECCDALKEFGVPYECTVVSAHRTPERMVKYARSAAGRGLRVIVAGAGGAAHLPGMVAALTVLPVIGVPVKTSALSGVDSLYSIVQMPKGVPVATVAIGNARNAGLLAVRMLAGCG--GDAALASRMAKFQDDARSEVEEKAAKLEEVGEEAYLANSGKKSATV 363 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109844.794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109844.794.1 >prot_H-elongata_contig109844.794.1 ID=prot_H-elongata_contig109844.794.1|Name=mRNA_H-elongata_contig109844.794.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp MAKIPPPLVGVIMGSDSDLPTMRAAADILDEFGVPYELTIVSAHRTPARMback to top mRNA from alignment at H-elongata_contig109844:1523..2089- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109844.794.1 ID=mRNA_H-elongata_contig109844.794.1|Name=mRNA_H-elongata_contig109844.794.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=567bp|location=Sequence derived from alignment at H-elongata_contig109844:1523..2089- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109844:1523..2089- >mRNA_H-elongata_contig109844.794.1 ID=mRNA_H-elongata_contig109844.794.1|Name=mRNA_H-elongata_contig109844.794.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1134bp|location=Sequence derived from alignment at H-elongata_contig109844:1523..2089- (Himanthalia elongata Himel1 dioecious)back to top |