prot_H-elongata_contig10982.792.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10982.792.1
Unique Nameprot_H-elongata_contig10982.792.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: D8LEW1_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW1_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 8.240e-110
Identity = 156/181 (86.19%), Postives = 167/181 (92.27%), Query Frame = 0
Query:    1 MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPSNGALRSGTN--IVRCHQIDV 179
            MDMI+VLNEKF SKR+TQE SRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTL+ASQWLMGPS+LND+EID G++GVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFF KDMGLALEMTPNYEDFSCQFSFNKTPL R MD++FRVACFEQCPS GALR      + RCHQID+
Sbjct:  132 MDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDI 312          
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: A0A835ZDY9_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY9_9STRA)

HSP 1 Score: 251 bits (640), Expect = 3.490e-82
Identity = 116/181 (64.09%), Postives = 147/181 (81.22%), Query Frame = 0
Query:    1 MDMIRVLNEK--FRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPSNGALRSGTNIVRCHQIDV 179
            ++MIR LN+   + +  +TQ+ +R+VL+SLFP WLP +FAVMFSKPFP FS R+NAWVTL+ASQWLMGPS++NDVEIDGG +GVGHGLLV+RCR+LE AGCASVC+NTCK+PT+EFFMKDMGL L+MTP+Y+DFSCQFSF K PL    D+ F VACFEQCP+  + +       CH++ +
Sbjct:   27 IEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKR-----LCHKVGL 202          
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: A0A8J4BT63_9CHLO (D27-like_C domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BT63_9CHLO)

HSP 1 Score: 234 bits (597), Expect = 7.610e-75
Identity = 107/161 (66.46%), Postives = 128/161 (79.50%), Query Frame = 0
Query:    1 MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPS 161
            +D+ R LN KFR+  ETQE +R +L +LFPSWLP +F VMFSKPFP FS RLNA  T +  QWLMGP ++NDVEIDGG +G GHG+LVERCR+LE AGCASVC+N+CK+PT+ FF KDMGL L MTPNYEDFSCQF+F KTP+   MD++F   CF QCPS
Sbjct:   88 IDLTRRLNSKFRTGAETQEATRAILNALFPSWLPGAFKVMFSKPFPEFSCRLNALATALTCQWLMGPCKVNDVEIDGGIVGKGHGVLVERCRYLEQAGCASVCINSCKIPTQTFFSKDMGLQLTMTPNYEDFSCQFAFGKTPMLAEMDEAFTTPCFRQCPS 248          
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: A0A7J7QQS2_9CHLO (D27-like_C domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQS2_9CHLO)

HSP 1 Score: 231 bits (589), Expect = 4.930e-74
Identity = 105/167 (62.87%), Postives = 131/167 (78.44%), Query Frame = 0
Query:    1 MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPSNGALRS 167
            +D+ R LN  +   R+ Q T+R++LKSLFPSWLP +FAVMFSKP P FS +LNA  T +  QWLMGP ++NDVE+D GS+G G G+LVERCR+LE AGCAS+C+N+CKVPT+EFF KDMGL L MTPNYEDFSCQF+F K PLP+ +D++F   CF+QCPS  A  S
Sbjct:   48 IDLTRRLNASYSEARQVQLTTRKILKSLFPSWLPGAFAVMFSKPLPEFSCKLNALATALTCQWLMGPCKVNDVELDDGSVGQGMGVLVERCRYLEQAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFTFGKAPLPQQLDEAFSTPCFQQCPSRAARYS 214          
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: I0YX40_COCSC (D27-like_C domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YX40_COCSC)

HSP 1 Score: 231 bits (588), Expect = 6.140e-74
Identity = 108/179 (60.34%), Postives = 132/179 (73.74%), Query Frame = 0
Query:    1 MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPSNGALRSGTNIVRCHQIDV 179
            +D+ R+LN K  + R+TQ  +R++L SLFPSWLP +F VMFSKP P  S +LNAWVT++  QWLMGP ++NDVE+DGG IG G G+LVERCR+LE  GCASVC+N+CK+PT+EFF KDMGL L MTPNYEDFSCQFSF  TP P  +D++F   CF QCPS    R      RC   DV
Sbjct:   54 VDLTRLLNSKSSNPRDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVELDGGRIGSGQGVLVERCRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPAAIDEAFATPCFSQCPSKQRHRGD----RCPGADV 228          
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: A0A836B305_CHLIN (D27-like_C domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A836B305_CHLIN)

HSP 1 Score: 229 bits (585), Expect = 7.520e-74
Identity = 106/164 (64.63%), Postives = 127/164 (77.44%), Query Frame = 0
Query:    1 MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPSNGA 164
            +D+ R LN KFR+  ETQE +R +L +LFPSWLP +F VMFS+P P FS RLNA+ T +  QWLMGP ++NDVEIDGG +G GHG+LVERCR+LE AGCASVC+N+CKVPT+ FF +DMGL L MTPNY+DFSCQFSF KTP P   D +F   CF QCPS  A
Sbjct:   25 IDLTRKLNTKFRTAAETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNAFATAMTCQWLMGPCKVNDVEIDGGQVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFERDMGLPLTMTPNYDDFSCQFSFGKTPDPVERDPAFATPCFVQCPSKRA 188          
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: A0A8J9RQD0_9CHLO (Beta-carotene isomerase D27, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQD0_9CHLO)

HSP 1 Score: 228 bits (580), Expect = 3.920e-73
Identity = 107/179 (59.78%), Postives = 131/179 (73.18%), Query Frame = 0
Query:    1 MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPSNGALRSGTNIVRCHQIDV 179
            +D+ RVLN +  + R+TQ  +R++L SLFPSWLP +F VMFSKP P  S +LNAWVT++  QWLMGP ++NDVE+DGG +G G G+LVERCR+LE  GCASVC+N+CK+PT+EFF KDMGL L MTPNYEDFSCQFSF  TP P   D++F   CF QCPS    R      RC   DV
Sbjct:   25 VDLTRVLNSQSNNPRDTQIKTRQILLSLFPSWLPPAFKVMFSKPLPDLSCQLNAWVTMLTCQWLMGPCKVNDVEVDGGRLGSGQGVLVERCRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPVTEDEAFATPCFAQCPSKQRHRG----YRCPGADV 199          
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: A8IC34_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IC34_CHLRE)

HSP 1 Score: 229 bits (583), Expect = 1.520e-72
Identity = 106/161 (65.84%), Postives = 125/161 (77.64%), Query Frame = 0
Query:    1 MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPS 161
            +D+ R LN KFR+  ETQE +R +L +LFPSWLP +F VMFS+P P FS RLNA  T +  QWLMGP ++NDVEIDGG +G GHG+LVERCR+LE AGCASVC+N+CKVPT+ FF KDMGL L MTPNY+DFSCQFSF KTP P   D +F   CF QCPS
Sbjct:   97 IDLTRKLNTKFRTAAETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVEIDGGKVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPS 257          
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: A0A0D2MYG1_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MYG1_9CHLO)

HSP 1 Score: 228 bits (581), Expect = 4.550e-72
Identity = 103/161 (63.98%), Postives = 128/161 (79.50%), Query Frame = 0
Query:    1 MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPS 161
            +D+ R LN ++++ R+TQ  +RR+L SLFPSWLP +F VMFS P PAFS RLNA  T +  QWLMGP ++NDVE+D G +G G G+LVERCR+LE AGCAS+C+N+CKVPT+EFF KDMGL L MTPNYEDFSCQF+F KTPLP+  D++F   CF QCPS
Sbjct:  111 IDLTRRLNRQYQTARDTQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVELDSGEVGSGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFAFGKTPLPQSQDEAFSTPCFTQCPS 271          
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Match: A0A2J8AIV6_9CHLO (D27-like_C domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AIV6_9CHLO)

HSP 1 Score: 226 bits (576), Expect = 4.260e-70
Identity = 102/167 (61.08%), Postives = 130/167 (77.84%), Query Frame = 0
Query:    1 MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDSFRVACFEQCPSNGALRS 167
            +D+ R LN KFR+  ETQE +R +L +LFPSWLP +F VMF++P P  S R+NA  T +  QWLMGP ++NDVE D G++G GHG+LVERCR+LE AGCA+VC+N+CKVPT+ FF KDMGLAL MTPNY+DFSCQF+F KTPLP   D+++  +CF QCPS  A R+
Sbjct:  211 IDLTRRLNNKFRTAAETQEATRSILIALFPSWLPGAFKVMFARPLPELSCRMNALATALTCQWLMGPCKVNDVETDDGTVGEGHGVLVERCRYLEQAGCAAVCINSCKVPTQSFFAKDMGLALTMTPNYDDFSCQFAFGKTPLPVSADEAYTTSCFAQCPSKKARRN 377          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10982.792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEW1_ECTSI8.240e-11086.19D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A835ZDY9_9STRA3.490e-8264.09D27-like_C domain-containing protein n=1 Tax=Tribo... [more]
A0A8J4BT63_9CHLO7.610e-7566.46D27-like_C domain-containing protein n=2 Tax=Volvo... [more]
A0A7J7QQS2_9CHLO4.930e-7462.87D27-like_C domain-containing protein n=1 Tax=Scene... [more]
I0YX40_COCSC6.140e-7460.34D27-like_C domain-containing protein n=1 Tax=Cocco... [more]
A0A836B305_CHLIN7.520e-7464.63D27-like_C domain-containing protein n=2 Tax=Chlam... [more]
A0A8J9RQD0_9CHLO3.920e-7359.78Beta-carotene isomerase D27, chloroplastic n=1 Tax... [more]
A8IC34_CHLRE1.520e-7265.84Predicted protein n=2 Tax=Chlamydomonas reinhardti... [more]
A0A0D2MYG1_9CHLO4.550e-7263.98D27-like_C domain-containing protein n=1 Tax=Monor... [more]
A0A2J8AIV6_9CHLO4.260e-7061.08D27-like_C domain-containing protein n=1 Tax=Tetra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025114Domain of unknown function DUF4033PFAMPF13225DUF4033coord: 63..144
e-value: 4.6E-33
score: 113.1
NoneNo IPR availablePANTHERPTHR33591:SF2BETA-CAROTENE ISOMERASE D27coord: 2..166
IPR038938Beta-carotene isomerase D27-likePANTHERPTHR33591FAMILY NOT NAMEDcoord: 2..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10982contigH-elongata_contig10982:2739..4556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10982.792.1mRNA_H-elongata_contig10982.792.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10982 2590..6603 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10982.792.1 ID=prot_H-elongata_contig10982.792.1|Name=mRNA_H-elongata_contig10982.792.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MDMIRVLNEKFRSKRETQETSRRVLKSLFPSWLPASFAVMFSKPFPAFSS
RLNAWVTLIASQWLMGPSELNDVEIDGGSIGVGHGLLVERCRFLEAAGCA
SVCMNTCKVPTEEFFMKDMGLALEMTPNYEDFSCQFSFNKTPLPRVMDDS
FRVACFEQCPSNGALRSGTNIVRCHQIDV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025114DUF4033
IPR038938D27-like